RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 SLC51AQ86UW1 340 aa10.18□□□□□ -0.78
PTPRM-205ENST00000577827 MFSD2AQ8NA29 543 aa10.18□□□□□ -0.78
PTPRM-205ENST00000577827 PIWIL1Q96J94 861 aaKnown RBP10.18□□□□□ -0.78
PTPRM-205ENST00000577827 ZNF382Q96SR6 550 aa10.18□□□□□ -0.78
PTPRM-205ENST00000577827 LPIN3Q9BQK8 851 aa10.18□□□□□ -0.78
PTPRM-205ENST00000577827 DUSP26Q9BV47 211 aa10.18□□□□□ -0.78
PTPRM-205ENST00000577827 SEZ6LQ9BYH1 1024 aa10.18□□□□□ -0.78
PTPRM-205ENST00000577827 SMOC2Q9H3U7 446 aa10.18□□□□□ -0.78
PTPRM-205ENST00000577827 CCDC177Q9NQR7 707 aaPredicted RBP10.18□□□□□ -0.78
PTPRM-205ENST00000577827 ZNF510Q9Y2H8 683 aa10.18□□□□□ -0.78
PTPRM-205ENST00000577827 SOCS2O14508 198 aa10.18□□□□□ -0.78
PTPRM-205ENST00000577827 MATN4O95460 622 aa10.18□□□□□ -0.78
PTPRM-205ENST00000577827 CCNYL3P0C7X3 344 aa10.18□□□□□ -0.78
PTPRM-205ENST00000577827 CD52P31358 61 aa10.18□□□□□ -0.78
PTPRM-205ENST00000577827 TGFBR2P37173 567 aa10.18□□□□□ -0.78
PTPRM-205ENST00000577827 DGKQP52824 942 aa10.18□□□□□ -0.78
PTPRM-205ENST00000577827 DPY19L2P1Q6NXN4 242 aa10.18□□□□□ -0.78
PTPRM-205ENST00000577827 NAPRTQ6XQN6 538 aa10.18□□□□□ -0.78
PTPRM-205ENST00000577827 C16orf62Q7Z3J2 963 aa10.18□□□□□ -0.78
PTPRM-205ENST00000577827 IZUMO1Q8IYV9 350 aa10.18□□□□□ -0.78
PTPRM-205ENST00000577827 SCML4Q8N228 414 aa10.18□□□□□ -0.78
PTPRM-205ENST00000577827 OR8H1Q8NGG4 311 aa10.18□□□□□ -0.78
PTPRM-205ENST00000577827 OR52J3Q8NH60 311 aa10.18□□□□□ -0.78
PTPRM-205ENST00000577827 MAPK15Q8TD08 544 aa10.18□□□□□ -0.78
PTPRM-205ENST00000577827 POLR2J2Q9GZM3 115 aaKnown RBP10.18□□□□□ -0.78
PTPRM-205ENST00000577827 SPON1Q9HCB6 807 aa10.18□□□□□ -0.78
PTPRM-205ENST00000577827 PAK6Q9NQU5 681 aaPredicted RBP10.18□□□□□ -0.78
PTPRM-205ENST00000577827 SEMA3GQ9NS98 782 aa10.18□□□□□ -0.78
PTPRM-205ENST00000577827 EXD2Q9NVH0 621 aa10.18□□□□□ -0.78
PTPRM-205ENST00000577827 CDC14AQ9UNH5 594 aa10.18□□□□□ -0.78
PTPRM-205ENST00000577827 PCDHGC4Q9Y5F7 938 aa10.18□□□□□ -0.78
PTPRM-205ENST00000577827 PCDHGA7Q9Y5G6 932 aa10.18□□□□□ -0.78
PTPRM-205ENST00000577827 PMF1-BGLAPU3KQ54 211 aa10.18□□□□□ -0.78
PTPRM-205ENST00000577827 COL2A1P02458 1487 aaPredicted RBP10.18□□□□□ -0.78
PTPRM-205ENST00000577827 CHD4Q14839 1912 aa10.18□□□□□ -0.78
PTPRM-205ENST00000577827 GRID2O43424 1007 aa10.18□□□□□ -0.78
PTPRM-205ENST00000577827 EDIL3O43854 480 aa10.18□□□□□ -0.78
PTPRM-205ENST00000577827 DDNO94850 711 aaPredicted RBP10.18□□□□□ -0.78
PTPRM-205ENST00000577827 TFAP2AP05549 437 aa10.18□□□□□ -0.78
PTPRM-205ENST00000577827 TFPTP0C1Z6 253 aa10.18□□□□□ -0.78
PTPRM-205ENST00000577827 MYCLP1P12525 358 aaPredicted RBP10.18□□□□□ -0.78
PTPRM-205ENST00000577827 HDCP19113 662 aa10.18□□□□□ -0.78
PTPRM-205ENST00000577827 PRKAG1P54619 331 aa10.18□□□□□ -0.78
PTPRM-205ENST00000577827 LGALS3BPQ08380 585 aa10.18□□□□□ -0.78
PTPRM-205ENST00000577827 SLC10A7Q0GE19 358 aa10.18□□□□□ -0.78
PTPRM-205ENST00000577827 LAPTM5Q13571 262 aa10.18□□□□□ -0.78
PTPRM-205ENST00000577827 C6orf136Q5SQH8 315 aa10.18□□□□□ -0.78
PTPRM-205ENST00000577827 ATG9BQ674R7 924 aa10.18□□□□□ -0.78
PTPRM-205ENST00000577827 SYCE2Q6PIF2 218 aa10.18□□□□□ -0.78
PTPRM-205ENST00000577827 CXCL17Q6UXB2 119 aa10.18□□□□□ -0.78
PTPRM-205ENST00000577827 HFE2Q6ZVN8 426 aa10.18□□□□□ -0.78
PTPRM-205ENST00000577827 SLC2A13Q96QE2 648 aa10.18□□□□□ -0.78
PTPRM-205ENST00000577827 RANBP9Q96S59 729 aa10.18□□□□□ -0.78
PTPRM-205ENST00000577827 MAPKAP1Q9BPZ7 522 aa10.18□□□□□ -0.78
PTPRM-205ENST00000577827 AIG1Q9NVV5 245 aa10.18□□□□□ -0.78
PTPRM-205ENST00000577827 RIMS3Q9UJD0 308 aa10.18□□□□□ -0.78
PTPRM-205ENST00000577827 MYH1P12882 1939 aa10.17□□□□□ -0.78
PTPRM-205ENST00000577827 MYH4Q9Y623 1939 aa10.17□□□□□ -0.78
PTPRM-205ENST00000577827 PRSS51A0A1B0GVH4 220 aa10.17□□□□□ -0.78
PTPRM-205ENST00000577827 PSIP1O75475 530 aaKnown RBP10.17□□□□□ -0.78
PTPRM-205ENST00000577827 CYP7B1O75881 506 aa10.17□□□□□ -0.78
PTPRM-205ENST00000577827 SNX4O95219 450 aa10.17□□□□□ -0.78
PTPRM-205ENST00000577827 G6PDP11413 515 aa10.17□□□□□ -0.78
PTPRM-205ENST00000577827 PIK3CBP42338 1070 aa10.17□□□□□ -0.78
PTPRM-205ENST00000577827 RFX3P48380 749 aa10.17□□□□□ -0.78
PTPRM-205ENST00000577827 CD97P48960 835 aa10.17□□□□□ -0.78
PTPRM-205ENST00000577827 CENPAP49450 140 aa10.17□□□□□ -0.78
PTPRM-205ENST00000577827 RELAQ04206 551 aa10.17□□□□□ -0.78
PTPRM-205ENST00000577827 TAZQ16635 292 aa10.17□□□□□ -0.78
PTPRM-205ENST00000577827 GPAT3Q53EU6 434 aa10.17□□□□□ -0.78
PTPRM-205ENST00000577827 PIK3R6Q5UE93 754 aa10.17□□□□□ -0.78
PTPRM-205ENST00000577827 TMEM53Q6P2H8 277 aa10.17□□□□□ -0.78
PTPRM-205ENST00000577827 USP50Q70EL3 339 aaPredicted RBP10.17□□□□□ -0.78
PTPRM-205ENST00000577827 DSG4Q86SJ6 1040 aa10.17□□□□□ -0.78
PTPRM-205ENST00000577827 ANKRD13BQ86YJ7 626 aa10.17□□□□□ -0.78
PTPRM-205ENST00000577827 TRIM48Q8IWZ4 208 aa10.17□□□□□ -0.78
PTPRM-205ENST00000577827 OR7D4Q8NG98 312 aa10.17□□□□□ -0.78
PTPRM-205ENST00000577827 KBTBD7Q8WVZ9 684 aa10.17□□□□□ -0.78
PTPRM-205ENST00000577827 SLC38A4Q969I6 547 aa10.17□□□□□ -0.78
PTPRM-205ENST00000577827 EFHD2Q96C19 240 aaPredicted RBP10.17□□□□□ -0.78
PTPRM-205ENST00000577827 KCNS3Q9BQ31 491 aa10.17□□□□□ -0.78
PTPRM-205ENST00000577827 TRIM8Q9BZR9 551 aa10.17□□□□□ -0.78
PTPRM-205ENST00000577827 OSGEPL1Q9H4B0 414 aa10.17□□□□□ -0.78
PTPRM-205ENST00000577827 STARD7Q9NQZ5 370 aa10.17□□□□□ -0.78
PTPRM-205ENST00000577827 SEC14L4Q9UDX3 406 aa10.17□□□□□ -0.78
PTPRM-205ENST00000577827 CEPT1Q9Y6K0 416 aa10.17□□□□□ -0.78
PTPRM-205ENST00000577827 SYN3O14994 580 aa10.17□□□□□ -0.78
PTPRM-205ENST00000577827 AP1G1O43747 822 aa10.17□□□□□ -0.78
PTPRM-205ENST00000577827 CDK14O94921 469 aa10.17□□□□□ -0.78
PTPRM-205ENST00000577827 TNNI3P19429 210 aa10.17□□□□□ -0.78
PTPRM-205ENST00000577827 ELK4P28324 431 aa10.17□□□□□ -0.78
PTPRM-205ENST00000577827 HNMTP50135 292 aa10.17□□□□□ -0.78
PTPRM-205ENST00000577827 DSC3Q14574 896 aa10.17□□□□□ -0.78
PTPRM-205ENST00000577827 ZNF697Q5TEC3 545 aa10.17□□□□□ -0.78
PTPRM-205ENST00000577827 PDE12Q6L8Q7 609 aaKnown RBP10.17□□□□□ -0.78
PTPRM-205ENST00000577827 LIN54Q6MZP7 749 aa10.17□□□□□ -0.78
PTPRM-205ENST00000577827 XKRXQ6PP77 449 aa10.17□□□□□ -0.78
PTPRM-205ENST00000577827 PIM3Q86V86 326 aa10.17□□□□□ -0.78
PTPRM-205ENST00000577827 PHC3Q8NDX5 983 aa10.17□□□□□ -0.78
PTPRM-205ENST00000577827 GAB3Q8WWW8 586 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms