RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 HOOK3Q86VS8 718 aa14.72□□□□□ -0.05
SNRPA1-210ENST00000560383 BPHLQ86WA6 291 aaPredicted RBP14.72□□□□□ -0.05
SNRPA1-210ENST00000560383 AMIGO1Q86WK6 493 aa14.72□□□□□ -0.05
SNRPA1-210ENST00000560383 VRK3Q8IV63 474 aa14.72□□□□□ -0.05
SNRPA1-210ENST00000560383 ADGRF3Q8IZF5 1079 aa14.72□□□□□ -0.05
SNRPA1-210ENST00000560383 D2HGDHQ8N465 521 aa14.72□□□□□ -0.05
SNRPA1-210ENST00000560383 OR5AR1Q8NGP9 310 aa14.72□□□□□ -0.05
SNRPA1-210ENST00000560383 OR5K2Q8NHB8 316 aa14.72□□□□□ -0.05
SNRPA1-210ENST00000560383 FCRL4Q96PJ5 515 aa14.72□□□□□ -0.05
SNRPA1-210ENST00000560383 PANX3Q96QZ0 392 aa14.72□□□□□ -0.05
SNRPA1-210ENST00000560383 OR6C1Q96RD1 312 aa14.72□□□□□ -0.05
SNRPA1-210ENST00000560383 TRIM56Q9BRZ2 755 aaKnown RBP14.72□□□□□ -0.05
SNRPA1-210ENST00000560383 HGH1Q9BTY7 390 aa14.72□□□□□ -0.05
SNRPA1-210ENST00000560383 PITPNM3Q9BZ71 974 aa14.72□□□□□ -0.05
SNRPA1-210ENST00000560383 ULBP3Q9BZM4 244 aa14.72□□□□□ -0.05
SNRPA1-210ENST00000560383 C1GALT1Q9NS00 363 aa14.72□□□□□ -0.05
SNRPA1-210ENST00000560383 POLG2Q9UHN1 485 aa14.72□□□□□ -0.05
SNRPA1-210ENST00000560383 GNPTGQ9UJJ9 305 aa14.72□□□□□ -0.05
SNRPA1-210ENST00000560383 ASF1AQ9Y294 204 aa14.72□□□□□ -0.05
SNRPA1-210ENST00000560383 BTRCQ9Y297 605 aa14.72□□□□□ -0.05
SNRPA1-210ENST00000560383 RPS6KL1Q9Y6S9 549 aa14.72□□□□□ -0.05
SNRPA1-210ENST00000560383 SPENQ96T58 3664 aaKnown RBP14.72□□□□□ -0.05
SNRPA1-210ENST00000560383 PIKFYVEQ9Y2I7 2098 aa14.72□□□□□ -0.05
SNRPA1-210ENST00000560383 UBA6A0AVT1 1052 aaPredicted RBP14.71□□□□□ -0.05
SNRPA1-210ENST00000560383 GOLGA8KD6RF30 607 aa14.71□□□□□ -0.05
SNRPA1-210ENST00000560383 GOLGA8TH3BQL2 631 aa14.71□□□□□ -0.05
SNRPA1-210ENST00000560383 KPNA5O15131 536 aa14.71□□□□□ -0.05
SNRPA1-210ENST00000560383 PFDN6O15212 129 aa14.71□□□□□ -0.05
SNRPA1-210ENST00000560383 USP1O94782 785 aa14.71□□□□□ -0.05
SNRPA1-210ENST00000560383 ZBTB11O95625 1053 aaPredicted RBP14.71□□□□□ -0.05
SNRPA1-210ENST00000560383 ESR1P03372 595 aa14.71□□□□□ -0.05
SNRPA1-210ENST00000560383 APOA4P06727 396 aa14.71□□□□□ -0.05
SNRPA1-210ENST00000560383 KCNC4Q03721 635 aa14.71□□□□□ -0.05
SNRPA1-210ENST00000560383 FOXM1Q08050 763 aa14.71□□□□□ -0.05
SNRPA1-210ENST00000560383 HSPA14Q0VDF9 509 aa14.71□□□□□ -0.05
SNRPA1-210ENST00000560383 PRKAA1Q13131 559 aa14.71□□□□□ -0.05
SNRPA1-210ENST00000560383 PRKG2Q13237 762 aa14.71□□□□□ -0.05
SNRPA1-210ENST00000560383 DHX34Q14147 1143 aaKnown RBP14.71□□□□□ -0.05
SNRPA1-210ENST00000560383 CTSL3PQ5NE16 218 aa14.71□□□□□ -0.05
SNRPA1-210ENST00000560383 PTRHD1Q6GMV3 140 aaKnown RBP14.71□□□□□ -0.05
SNRPA1-210ENST00000560383 CENPUQ71F23 418 aa14.71□□□□□ -0.05
SNRPA1-210ENST00000560383 PCGF5Q86SE9 256 aa14.71□□□□□ -0.05
SNRPA1-210ENST00000560383 CILP2Q8IUL8 1156 aa14.71□□□□□ -0.05
SNRPA1-210ENST00000560383 KRT222Q8N1A0 295 aa14.71□□□□□ -0.05
SNRPA1-210ENST00000560383 SIDT2Q8NBJ9 832 aaKnown RBP14.71□□□□□ -0.05
SNRPA1-210ENST00000560383 STARD8Q92502 1023 aa14.71□□□□□ -0.05
SNRPA1-210ENST00000560383 CAPZA3Q96KX2 299 aa14.71□□□□□ -0.05
SNRPA1-210ENST00000560383 NRTNQ99748 197 aa14.71□□□□□ -0.05
SNRPA1-210ENST00000560383 LATS2Q9NRM7 1088 aa14.71□□□□□ -0.05
SNRPA1-210ENST00000560383 ASIC3Q9UHC3 531 aa14.71□□□□□ -0.05
SNRPA1-210ENST00000560383 ICKQ9UPZ9 632 aa14.71□□□□□ -0.05
SNRPA1-210ENST00000560383 VPS9D1Q9Y2B5 631 aa14.71□□□□□ -0.05
SNRPA1-210ENST00000560383 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.71□□□□□ -0.05
SNRPA1-210ENST00000560383 H3BMM5 538 aa14.7□□□□□ -0.06
SNRPA1-210ENST00000560383 CCDC188H7C350 402 aa14.7□□□□□ -0.06
SNRPA1-210ENST00000560383 BTN3A1O00481 513 aa14.7□□□□□ -0.06
SNRPA1-210ENST00000560383 MSL3P1P0C860 447 aa14.7□□□□□ -0.06
SNRPA1-210ENST00000560383 FOLR1P15328 257 aa14.7□□□□□ -0.06
SNRPA1-210ENST00000560383 PRDX3P30048 256 aaKnown RBP14.7□□□□□ -0.06
SNRPA1-210ENST00000560383 SHMT2P34897 504 aa14.7□□□□□ -0.06
SNRPA1-210ENST00000560383 ACY1Q03154 408 aa14.7□□□□□ -0.06
SNRPA1-210ENST00000560383 GBX1Q14549 363 aa14.7□□□□□ -0.06
SNRPA1-210ENST00000560383 UNC5DQ6UXZ4 953 aa14.7□□□□□ -0.06
SNRPA1-210ENST00000560383 LMNTD2Q8IXW0 634 aa14.7□□□□□ -0.06
SNRPA1-210ENST00000560383 ZNF669Q96BR6 464 aaPredicted RBP14.7□□□□□ -0.06
SNRPA1-210ENST00000560383 PPM1MQ96MI6 270 aa14.7□□□□□ -0.06
SNRPA1-210ENST00000560383 MENTQ9BUN1 341 aa14.7□□□□□ -0.06
SNRPA1-210ENST00000560383 INTS10Q9NVR2 710 aaKnown RBP14.7□□□□□ -0.06
SNRPA1-210ENST00000560383 OR6C2Q9NZP2 312 aa14.7□□□□□ -0.06
SNRPA1-210ENST00000560383 FAM169AQ9Y6X4 670 aa14.7□□□□□ -0.06
SNRPA1-210ENST00000560383 COL12A1Q99715 3063 aa14.69□□□□□ -0.06
SNRPA1-210ENST00000560383 C2orf74A8MZ97 194 aa14.69□□□□□ -0.06
SNRPA1-210ENST00000560383 SMAPO00193 183 aa14.69□□□□□ -0.06
SNRPA1-210ENST00000560383 NKX2-8O15522 239 aa14.69□□□□□ -0.06
SNRPA1-210ENST00000560383 SPAG6O75602 509 aa14.69□□□□□ -0.06
SNRPA1-210ENST00000560383 S1PR4O95977 384 aa14.69□□□□□ -0.06
SNRPA1-210ENST00000560383 EBLN1P0CF75 366 aa14.69□□□□□ -0.06
SNRPA1-210ENST00000560383 ZNF28P17035 718 aa14.69□□□□□ -0.06
SNRPA1-210ENST00000560383 OAS2P29728 719 aaKnown RBP14.69□□□□□ -0.06
SNRPA1-210ENST00000560383 PAFAH1B1P43034 410 aa14.69□□□□□ -0.06
SNRPA1-210ENST00000560383 CSE1LP55060 971 aaKnown RBP14.69□□□□□ -0.06
SNRPA1-210ENST00000560383 EIF3BP55884 814 aaKnown RBP14.69□□□□□ -0.06
SNRPA1-210ENST00000560383 TUBB4BP68371 445 aa14.69□□□□□ -0.06
SNRPA1-210ENST00000560383 DR1Q01658 176 aa14.69□□□□□ -0.06
SNRPA1-210ENST00000560383 TUBB3Q13509 450 aa14.69□□□□□ -0.06
SNRPA1-210ENST00000560383 TUBB2AQ13885 445 aa14.69□□□□□ -0.06
SNRPA1-210ENST00000560383 GRB7Q14451 532 aa14.69□□□□□ -0.06
SNRPA1-210ENST00000560383 KCNAB1Q14722 419 aa14.69□□□□□ -0.06
SNRPA1-210ENST00000560383 TMED2Q15363 201 aa14.69□□□□□ -0.06
SNRPA1-210ENST00000560383 KYNUQ16719 465 aa14.69□□□□□ -0.06
SNRPA1-210ENST00000560383 PLEKHS1Q5SXH7 462 aa14.69□□□□□ -0.06
SNRPA1-210ENST00000560383 C6orf15Q6UXA7 325 aaPredicted RBP14.69□□□□□ -0.06
SNRPA1-210ENST00000560383 UNC5AQ6ZN44 842 aa14.69□□□□□ -0.06
SNRPA1-210ENST00000560383 OTOAQ7RTW8 1153 aa14.69□□□□□ -0.06
SNRPA1-210ENST00000560383 PPP1R3BQ86XI6 285 aa14.69□□□□□ -0.06
SNRPA1-210ENST00000560383 UNC5BQ8IZJ1 945 aa14.69□□□□□ -0.06
SNRPA1-210ENST00000560383 OTUD6BQ8N6M0 293 aa14.69□□□□□ -0.06
SNRPA1-210ENST00000560383 FLVCR1-AS1Q8TAF5 88 aa14.69□□□□□ -0.06
SNRPA1-210ENST00000560383 APOBEC4Q8WW27 367 aaKnown RBP14.69□□□□□ -0.06
SNRPA1-210ENST00000560383 STAMBPL1Q96FJ0 436 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms