RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 DGKBQ9Y6T7 804 aa3.83□□□□□ -1.8
CHD8-212ENST00000557329 SF3B1O75533 1304 aaKnown RBP eCLIP3.83□□□□□ -1.8
CHD8-212ENST00000557329 NFASCO94856 1347 aa3.83□□□□□ -1.8
CHD8-212ENST00000557329 THADAQ6YHU6 1953 aa3.82□□□□□ -1.8
CHD8-212ENST00000557329 MTCL1Q9Y4B5 1905 aaKnown RBP3.82□□□□□ -1.8
CHD8-212ENST00000557329 A0A0D9SFI3 127 aa3.82□□□□□ -1.8
CHD8-212ENST00000557329 TMEM150BA6NC51 233 aa3.82□□□□□ -1.8
CHD8-212ENST00000557329 ENO4A6NNW6 628 aa3.82□□□□□ -1.8
CHD8-212ENST00000557329 I3L4J1 428 aa3.82□□□□□ -1.8
CHD8-212ENST00000557329 PLK4O00444 970 aa3.82□□□□□ -1.8
CHD8-212ENST00000557329 CHADO15335 359 aa3.82□□□□□ -1.8
CHD8-212ENST00000557329 CYTH3O43739 400 aa3.82□□□□□ -1.8
CHD8-212ENST00000557329 AKAP3O75969 853 aa3.82□□□□□ -1.8
CHD8-212ENST00000557329 PAPSS2O95340 614 aaPredicted RBP3.82□□□□□ -1.8
CHD8-212ENST00000557329 VNN2O95498 520 aa3.82□□□□□ -1.8
CHD8-212ENST00000557329 BCKDHBP21953 392 aa3.82□□□□□ -1.8
CHD8-212ENST00000557329 FCARP24071 287 aa3.82□□□□□ -1.8
CHD8-212ENST00000557329 TNFRSF8P28908 595 aa3.82□□□□□ -1.8
CHD8-212ENST00000557329 TTKP33981 857 aa3.82□□□□□ -1.8
CHD8-212ENST00000557329 NAPAP54920 295 aa3.82□□□□□ -1.8
CHD8-212ENST00000557329 PRKCEQ02156 737 aa3.82□□□□□ -1.8
CHD8-212ENST00000557329 CYP4A11Q02928 519 aa3.82□□□□□ -1.8
CHD8-212ENST00000557329 TWF1Q12792 350 aa3.82□□□□□ -1.8
CHD8-212ENST00000557329 KIF5AQ12840 1032 aa3.82□□□□□ -1.8
CHD8-212ENST00000557329 TRPC3Q13507 836 aa3.82□□□□□ -1.8
CHD8-212ENST00000557329 RUNX2Q13950 521 aa3.82□□□□□ -1.8
CHD8-212ENST00000557329 HNF4GQ14541 408 aa3.82□□□□□ -1.8
CHD8-212ENST00000557329 DMC1Q14565 340 aa3.82□□□□□ -1.8
CHD8-212ENST00000557329 HIST2H2ACQ16777 129 aaPredicted RBP3.82□□□□□ -1.8
CHD8-212ENST00000557329 CEP55Q53EZ4 464 aa3.82□□□□□ -1.8
CHD8-212ENST00000557329 JAKMIP3Q5VZ66 844 aa3.82□□□□□ -1.8
CHD8-212ENST00000557329 LYSMD4Q5XG99 296 aa3.82□□□□□ -1.8
CHD8-212ENST00000557329 TYW3Q6IPR3 259 aaKnown RBP3.82□□□□□ -1.8
CHD8-212ENST00000557329 SPSB3Q6PJ21 355 aa3.82□□□□□ -1.8
CHD8-212ENST00000557329 CPLX2Q6PUV4 134 aaKnown RBP3.82□□□□□ -1.8
CHD8-212ENST00000557329 CWC27Q6UX04 472 aaKnown RBP3.82□□□□□ -1.8
CHD8-212ENST00000557329 H1FNTQ75WM6 255 aaPredicted RBP3.82□□□□□ -1.8
CHD8-212ENST00000557329 TBC1D26Q86UD7 250 aa3.82□□□□□ -1.8
CHD8-212ENST00000557329 ZNF589Q86UQ0 364 aaPredicted RBP3.82□□□□□ -1.8
CHD8-212ENST00000557329 LRRTM4Q86VH4 590 aa3.82□□□□□ -1.8
CHD8-212ENST00000557329 ARID3BQ8IVW6 561 aaPredicted RBP3.82□□□□□ -1.8
CHD8-212ENST00000557329 MB21D2Q8IYB1 491 aaPredicted RBP3.82□□□□□ -1.8
CHD8-212ENST00000557329 DCP1BQ8IZD4 617 aaKnown RBP3.82□□□□□ -1.8
CHD8-212ENST00000557329 AADATQ8N5Z0 425 aa3.82□□□□□ -1.8
CHD8-212ENST00000557329 LSM14AQ8ND56 463 aaKnown RBP3.82□□□□□ -1.8
CHD8-212ENST00000557329 CNNM3Q8NE01 707 aa3.82□□□□□ -1.8
CHD8-212ENST00000557329 LNX1Q8TBB1 728 aaPredicted RBP3.82□□□□□ -1.8
CHD8-212ENST00000557329 ADAMTS14Q8WXS8 1223 aa3.82□□□□□ -1.8
CHD8-212ENST00000557329 EXOC4Q96A65 974 aa3.82□□□□□ -1.8
CHD8-212ENST00000557329 EVI5LQ96CN4 794 aa3.82□□□□□ -1.8
CHD8-212ENST00000557329 MSANTD3Q96H12 275 aa3.82□□□□□ -1.8
CHD8-212ENST00000557329 TXNDC15Q96J42 360 aa3.82□□□□□ -1.8
CHD8-212ENST00000557329 ZNF385AQ96PM9 386 aaKnown RBP3.82□□□□□ -1.8
CHD8-212ENST00000557329 MSTO1Q9BUK6 570 aa3.82□□□□□ -1.8
CHD8-212ENST00000557329 CHMP4BQ9H444 224 aaKnown RBP3.82□□□□□ -1.8
CHD8-212ENST00000557329 LY9Q9HBG7 655 aa3.82□□□□□ -1.8
CHD8-212ENST00000557329 SMYD2Q9NRG4 433 aa3.82□□□□□ -1.8
CHD8-212ENST00000557329 GKN1Q9NS71 199 aa3.82□□□□□ -1.8
CHD8-212ENST00000557329 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.82□□□□□ -1.8
CHD8-212ENST00000557329 NAP1L2Q9ULW6 460 aaPredicted RBP3.82□□□□□ -1.8
CHD8-212ENST00000557329 DDX19BQ9UMR2 479 aa3.82□□□□□ -1.8
CHD8-212ENST00000557329 GPR52Q9Y2T5 361 aa3.82□□□□□ -1.8
CHD8-212ENST00000557329 PCDHGB1Q9Y5G3 927 aa3.82□□□□□ -1.8
CHD8-212ENST00000557329 NFS1Q9Y697 457 aa3.82□□□□□ -1.8
CHD8-212ENST00000557329 HELZ2Q9BYK8 2649 aaKnown RBP3.82□□□□□ -1.8
CHD8-212ENST00000557329 SPAG17Q6Q759 2223 aa3.82□□□□□ -1.8
CHD8-212ENST00000557329 FRMPD4Q14CM0 1322 aa3.81□□□□□ -1.8
CHD8-212ENST00000557329 TTC41PQ6P2S7 1318 aa3.81□□□□□ -1.8
CHD8-212ENST00000557329 IGLV5-37A0A075B6J1 123 aa3.81□□□□□ -1.8
CHD8-212ENST00000557329 IGKV6D-21A0A0A0MT36 114 aa3.81□□□□□ -1.8
CHD8-212ENST00000557329 MYBPHLA2RUH7 354 aa3.81□□□□□ -1.8
CHD8-212ENST00000557329 CCDC69A6NI79 296 aa3.81□□□□□ -1.8
CHD8-212ENST00000557329 TSPAN4O14817 238 aa3.81□□□□□ -1.8
CHD8-212ENST00000557329 KRT86O43790 486 aa3.81□□□□□ -1.8
CHD8-212ENST00000557329 TIPRLO75663 272 aa3.81□□□□□ -1.8
CHD8-212ENST00000557329 B3GAT3O94766 335 aa3.81□□□□□ -1.8
CHD8-212ENST00000557329 HOXB5P09067 269 aa3.81□□□□□ -1.8
CHD8-212ENST00000557329 HLA-EP13747 358 aa3.81□□□□□ -1.8
CHD8-212ENST00000557329 XBP1P17861 261 aa3.81□□□□□ -1.8
CHD8-212ENST00000557329 MX1P20591 662 aa3.81□□□□□ -1.8
CHD8-212ENST00000557329 MT3P25713 68 aa3.81□□□□□ -1.8
CHD8-212ENST00000557329 ADSSP30520 456 aa3.81□□□□□ -1.8
CHD8-212ENST00000557329 HOXA6P31267 233 aa3.81□□□□□ -1.8
CHD8-212ENST00000557329 HOXA9P31269 272 aa3.81□□□□□ -1.8
CHD8-212ENST00000557329 RYKP34925 604 aa3.81□□□□□ -1.8
CHD8-212ENST00000557329 CCR2P41597 374 aa3.81□□□□□ -1.8
CHD8-212ENST00000557329 PTGER3P43115 390 aa3.81□□□□□ -1.8
CHD8-212ENST00000557329 PTPN9P43378 593 aa3.81□□□□□ -1.8
CHD8-212ENST00000557329 MXI1P50539 228 aa3.81□□□□□ -1.8
CHD8-212ENST00000557329 PMS2P54278 862 aa3.81□□□□□ -1.8
CHD8-212ENST00000557329 RPL36AP83881 106 aaKnown RBP3.81□□□□□ -1.8
CHD8-212ENST00000557329 ITGADQ13349 1161 aa3.81□□□□□ -1.8
CHD8-212ENST00000557329 HNRNPDQ14103 355 aaKnown RBP3.81□□□□□ -1.8
CHD8-212ENST00000557329 KRT81Q14533 505 aa3.81□□□□□ -1.8
CHD8-212ENST00000557329 DHX8Q14562 1220 aaKnown RBP3.81□□□□□ -1.8
CHD8-212ENST00000557329 SLC39A14Q15043 492 aa3.81□□□□□ -1.8
CHD8-212ENST00000557329 TAF11Q15544 211 aa3.81□□□□□ -1.8
CHD8-212ENST00000557329 CALCRLQ16602 461 aa3.81□□□□□ -1.8
CHD8-212ENST00000557329 DUOXA1Q1HG43 343 aa3.81□□□□□ -1.8
CHD8-212ENST00000557329 IZUMO4Q1ZYL8 232 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms