RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 ARMC6Q6NXE6 501 aa10.01□□□□□ -0.81
SHMT2-224ENST00000556737 CCDC137Q6PK04 289 aaKnown RBP10.01□□□□□ -0.81
SHMT2-224ENST00000556737 CES3Q6UWW8 571 aa10.01□□□□□ -0.81
SHMT2-224ENST00000556737 C6orf15Q6UXA7 325 aaPredicted RBP10.01□□□□□ -0.81
SHMT2-224ENST00000556737 ZNF572Q7Z3I7 529 aaPredicted RBP10.01□□□□□ -0.81
SHMT2-224ENST00000556737 AMIGO1Q86WK6 493 aa10.01□□□□□ -0.81
SHMT2-224ENST00000556737 RASGRP3Q8IV61 690 aa10.01□□□□□ -0.81
SHMT2-224ENST00000556737 TBC1D21Q8IYX1 336 aa10.01□□□□□ -0.81
SHMT2-224ENST00000556737 ZSCAN1Q8NBB4 408 aa10.01□□□□□ -0.81
SHMT2-224ENST00000556737 OR5K2Q8NHB8 316 aa10.01□□□□□ -0.81
SHMT2-224ENST00000556737 GRK7Q8WTQ7 553 aa10.01□□□□□ -0.81
SHMT2-224ENST00000556737 STARD8Q92502 1023 aa10.01□□□□□ -0.81
SHMT2-224ENST00000556737 MED8Q96G25 268 aa10.01□□□□□ -0.81
SHMT2-224ENST00000556737 MENTQ9BUN1 341 aa10.01□□□□□ -0.81
SHMT2-224ENST00000556737 PDE7BQ9NP56 450 aa10.01□□□□□ -0.81
SHMT2-224ENST00000556737 LATS2Q9NRM7 1088 aa10.01□□□□□ -0.81
SHMT2-224ENST00000556737 C1GALT1Q9NS00 363 aa10.01□□□□□ -0.81
SHMT2-224ENST00000556737 ACTR10Q9NZ32 417 aa10.01□□□□□ -0.81
SHMT2-224ENST00000556737 BFARQ9NZS9 450 aa10.01□□□□□ -0.81
SHMT2-224ENST00000556737 LNPEPQ9UIQ6 1025 aa10.01□□□□□ -0.81
SHMT2-224ENST00000556737 CROTQ9UKG9 612 aa10.01□□□□□ -0.81
SHMT2-224ENST00000556737 RARRES3Q9UL19 164 aa10.01□□□□□ -0.81
SHMT2-224ENST00000556737 ASF1AQ9Y294 204 aa10.01□□□□□ -0.81
SHMT2-224ENST00000556737 SNRNP200O75643 2136 aaKnown RBP10.01□□□□□ -0.81
SHMT2-224ENST00000556737 COL6A6A6NMZ7 2263 aa10□□□□□ -0.81
SHMT2-224ENST00000556737 GSAPA4D1B5 854 aa10□□□□□ -0.81
SHMT2-224ENST00000556737 GOLGA8KD6RF30 607 aa10□□□□□ -0.81
SHMT2-224ENST00000556737 GOLGA8TH3BQL2 631 aa10□□□□□ -0.81
SHMT2-224ENST00000556737 NKX2-8O15522 239 aa10□□□□□ -0.81
SHMT2-224ENST00000556737 FAM87AP0C7U9 286 aa10□□□□□ -0.81
SHMT2-224ENST00000556737 MSL3P1P0C860 447 aa10□□□□□ -0.81
SHMT2-224ENST00000556737 CDH3P22223 829 aa10□□□□□ -0.81
SHMT2-224ENST00000556737 RPS3P23396 243 aaKnown RBP eCLIP10□□□□□ -0.816e-7■■□□□ 13.4
SHMT2-224ENST00000556737 AOAHP28039 575 aa10□□□□□ -0.81
SHMT2-224ENST00000556737 PKLRP30613 574 aa10□□□□□ -0.81
SHMT2-224ENST00000556737 SHMT2P34897 504 aa10□□□□□ -0.81
SHMT2-224ENST00000556737 FNTAP49354 379 aa10□□□□□ -0.81
SHMT2-224ENST00000556737 CSE1LP55060 971 aaKnown RBP10□□□□□ -0.81
SHMT2-224ENST00000556737 DR1Q01658 176 aa10□□□□□ -0.81
SHMT2-224ENST00000556737 PLOD1Q02809 727 aaPredicted RBP10□□□□□ -0.81
SHMT2-224ENST00000556737 C19orf57Q0VDD7 668 aa10□□□□□ -0.81
SHMT2-224ENST00000556737 PRKAA1Q13131 559 aa10□□□□□ -0.81
SHMT2-224ENST00000556737 ERCC6LQ2NKX8 1250 aa10□□□□□ -0.81
SHMT2-224ENST00000556737 ARMC3Q5W041 872 aa10□□□□□ -0.81
SHMT2-224ENST00000556737 CYB5D1Q6P9G0 228 aa10□□□□□ -0.81
SHMT2-224ENST00000556737 ZNF449Q6P9G9 518 aa10□□□□□ -0.81
SHMT2-224ENST00000556737 SPESP1Q6UW49 350 aa10□□□□□ -0.81
SHMT2-224ENST00000556737 UNC5AQ6ZN44 842 aa10□□□□□ -0.81
SHMT2-224ENST00000556737 MAATS1Q7Z4T9 603 aa10□□□□□ -0.81
SHMT2-224ENST00000556737 TRIM73Q86UV7 250 aa10□□□□□ -0.81
SHMT2-224ENST00000556737 MMGT1Q8N4V1 131 aa10□□□□□ -0.81
SHMT2-224ENST00000556737 NAT8LQ8N9F0 302 aa10□□□□□ -0.81
SHMT2-224ENST00000556737 CT55Q8WUE5 264 aa10□□□□□ -0.81
SHMT2-224ENST00000556737 LPGAT1Q92604 370 aa10□□□□□ -0.81
SHMT2-224ENST00000556737 KIAA1143Q96AT1 154 aaPredicted RBP10□□□□□ -0.81
SHMT2-224ENST00000556737 STAMBPL1Q96FJ0 436 aa10□□□□□ -0.81
SHMT2-224ENST00000556737 RUNDC3BQ96NL0 473 aa10□□□□□ -0.81
SHMT2-224ENST00000556737 BIRC8Q96P09 236 aa10□□□□□ -0.81
SHMT2-224ENST00000556737 SERPINB12Q96P63 405 aa10□□□□□ -0.81
SHMT2-224ENST00000556737 FCRL4Q96PJ5 515 aa10□□□□□ -0.81
SHMT2-224ENST00000556737 TRAPPC9Q96Q05 1148 aa10□□□□□ -0.81
SHMT2-224ENST00000556737 RUFY1Q96T51 708 aa10□□□□□ -0.81
SHMT2-224ENST00000556737 TTC1Q99614 292 aa10□□□□□ -0.81
SHMT2-224ENST00000556737 AKIRIN1Q9H9L7 192 aaPredicted RBP10□□□□□ -0.81
SHMT2-224ENST00000556737 SOHLH2Q9NX45 425 aa10□□□□□ -0.81
SHMT2-224ENST00000556737 SPHK1Q9NYA1 384 aa10□□□□□ -0.81
SHMT2-224ENST00000556737 GNPTGQ9UJJ9 305 aa10□□□□□ -0.81
SHMT2-224ENST00000556737 PLAGL1Q9UM63 463 aa10□□□□□ -0.81
SHMT2-224ENST00000556737 PCDHGA6Q9Y5G7 932 aa10□□□□□ -0.81
SHMT2-224ENST00000556737 TLN1Q9Y490 2541 aaKnown RBP9.99□□□□□ -0.81
SHMT2-224ENST00000556737 FER1L5A0AVI2 2057 aa9.99□□□□□ -0.81
SHMT2-224ENST00000556737 PIPSLA2A3N6 862 aa9.99□□□□□ -0.81
SHMT2-224ENST00000556737 C2orf74A8MZ97 194 aa9.99□□□□□ -0.81
SHMT2-224ENST00000556737 H3BMH7 237 aa9.99□□□□□ -0.81
SHMT2-224ENST00000556737 SCRG1O75711 98 aa9.99□□□□□ -0.81
SHMT2-224ENST00000556737 SLCO2B1O94956 709 aa9.99□□□□□ -0.81
SHMT2-224ENST00000556737 VAPBO95292 243 aa9.99□□□□□ -0.81
SHMT2-224ENST00000556737 F7P08709 466 aaPredicted RBP9.99□□□□□ -0.81
SHMT2-224ENST00000556737 CHRM5P08912 532 aaPredicted RBP9.99□□□□□ -0.81
SHMT2-224ENST00000556737 PRKAR1AP10644 381 aa9.99□□□□□ -0.81
SHMT2-224ENST00000556737 MLNP12872 115 aa9.99□□□□□ -0.81
SHMT2-224ENST00000556737 UGT2B7P16662 529 aa9.99□□□□□ -0.81
SHMT2-224ENST00000556737 DLSTP36957 453 aa9.99□□□□□ -0.81
SHMT2-224ENST00000556737 GABRA4P48169 554 aa9.99□□□□□ -0.81
SHMT2-224ENST00000556737 ARL4DP49703 201 aa9.99□□□□□ -0.81
SHMT2-224ENST00000556737 HSPA14Q0VDF9 509 aa9.99□□□□□ -0.81
SHMT2-224ENST00000556737 GPS2Q13227 327 aa9.99□□□□□ -0.81
SHMT2-224ENST00000556737 DNASE1L3Q13609 305 aa9.99□□□□□ -0.81
SHMT2-224ENST00000556737 GBX1Q14549 363 aa9.99□□□□□ -0.81
SHMT2-224ENST00000556737 ZIC1Q15915 447 aa9.99□□□□□ -0.81
SHMT2-224ENST00000556737 CRTC2Q53ET0 693 aaPredicted RBP9.99□□□□□ -0.81
SHMT2-224ENST00000556737 DNAJC21Q5F1R6 531 aaKnown RBP9.99□□□□□ -0.81
SHMT2-224ENST00000556737 PRAMEF17Q5VTA0 474 aa9.99□□□□□ -0.81
SHMT2-224ENST00000556737 ZNF517Q6ZMY9 492 aaPredicted RBP9.99□□□□□ -0.81
SHMT2-224ENST00000556737 CDHR3Q6ZTQ4 885 aa9.99□□□□□ -0.81
SHMT2-224ENST00000556737 BPHLQ86WA6 291 aaPredicted RBP9.99□□□□□ -0.81
SHMT2-224ENST00000556737 LRRC6Q86X45 466 aa9.99□□□□□ -0.81
SHMT2-224ENST00000556737 LINC01555Q8NAE3 123 aa9.99□□□□□ -0.81
SHMT2-224ENST00000556737 SLC38A9Q8NBW4 561 aa9.99□□□□□ -0.81
SHMT2-224ENST00000556737 MCUQ8NE86 351 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms