RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 MZT1Q08AG7 82 aa5.08□□□□□ -1.6
CKS1BP1-201ENST00000555221 ACCSLQ4AC99 568 aa5.08□□□□□ -1.6
CKS1BP1-201ENST00000555221 CAPRIN2Q6IMN6 1127 aaKnown RBP5.08□□□□□ -1.6
CKS1BP1-201ENST00000555221 CAVIN1Q6NZI2 390 aaKnown RBP5.08□□□□□ -1.6
CKS1BP1-201ENST00000555221 MOXD1Q6UVY6 613 aa5.08□□□□□ -1.6
CKS1BP1-201ENST00000555221 FOXL2NBQ6ZUU3 175 aa5.08□□□□□ -1.6
CKS1BP1-201ENST00000555221 DNAJB7Q7Z6W7 309 aaPredicted RBP5.08□□□□□ -1.6
CKS1BP1-201ENST00000555221 CFAP206Q8IYR0 622 aa5.08□□□□□ -1.6
CKS1BP1-201ENST00000555221 ARHGAP24Q8N264 748 aa5.08□□□□□ -1.6
CKS1BP1-201ENST00000555221 MAB21L3Q8N8X9 362 aa5.08□□□□□ -1.6
CKS1BP1-201ENST00000555221 TRIML1Q8N9V2 468 aa5.08□□□□□ -1.6
CKS1BP1-201ENST00000555221 LMO3Q8TAP4 145 aa5.08□□□□□ -1.6
CKS1BP1-201ENST00000555221 ZNF473Q8WTR7 871 aaKnown RBP5.08□□□□□ -1.6
CKS1BP1-201ENST00000555221 ZNF583Q96ND8 569 aa5.08□□□□□ -1.6
CKS1BP1-201ENST00000555221 THUMPD3Q9BV44 507 aaKnown RBP5.08□□□□□ -1.6
CKS1BP1-201ENST00000555221 RETREG1Q9H6L5 497 aa5.08□□□□□ -1.6
CKS1BP1-201ENST00000555221 FLT1P17948 1338 aa5.07□□□□□ -1.6
CKS1BP1-201ENST00000555221 TRAV34A0A0B4J273 112 aa5.07□□□□□ -1.6
CKS1BP1-201ENST00000555221 HTR3EA5X5Y0 456 aa5.07□□□□□ -1.6
CKS1BP1-201ENST00000555221 GAPDHSO14556 408 aaPredicted RBP5.07□□□□□ -1.6
CKS1BP1-201ENST00000555221 INHBAP08476 426 aa5.07□□□□□ -1.6
CKS1BP1-201ENST00000555221 CD22P20273 847 aa5.07□□□□□ -1.6
CKS1BP1-201ENST00000555221 MPZP25189 248 aa5.07□□□□□ -1.6
CKS1BP1-201ENST00000555221 HOXC13P31276 330 aa5.07□□□□□ -1.6
CKS1BP1-201ENST00000555221 CTNNA1P35221 906 aaKnown RBP5.07□□□□□ -1.6
CKS1BP1-201ENST00000555221 NR2C2P49116 596 aa5.07□□□□□ -1.6
CKS1BP1-201ENST00000555221 MAPK12P53778 367 aa5.07□□□□□ -1.6
CKS1BP1-201ENST00000555221 POLR2LP62875 67 aaKnown RBP5.07□□□□□ -1.6
CKS1BP1-201ENST00000555221 KRT83P78385 493 aa5.07□□□□□ -1.6
CKS1BP1-201ENST00000555221 CUL3Q13618 768 aa5.07□□□□□ -1.6
CKS1BP1-201ENST00000555221 SYT14P1Q58G82 188 aa5.07□□□□□ -1.6
CKS1BP1-201ENST00000555221 ELFN2Q5R3F8 820 aa5.07□□□□□ -1.6
CKS1BP1-201ENST00000555221 WBP2NLQ6ICG8 309 aa5.07□□□□□ -1.6
CKS1BP1-201ENST00000555221 C11orf63Q6NUN7 778 aa5.07□□□□□ -1.6
CKS1BP1-201ENST00000555221 C11orf88Q6PI97 169 aa5.07□□□□□ -1.6
CKS1BP1-201ENST00000555221 ABI3BPQ7Z7G0 1075 aa5.07□□□□□ -1.6
CKS1BP1-201ENST00000555221 TMPRSS11BQ86T26 416 aa5.07□□□□□ -1.6
CKS1BP1-201ENST00000555221 OR13A1Q8NGR1 328 aa5.07□□□□□ -1.6
CKS1BP1-201ENST00000555221 GOT1L1Q8NHS2 421 aaPredicted RBP5.07□□□□□ -1.6
CKS1BP1-201ENST00000555221 SPATA20Q8TB22 786 aa5.07□□□□□ -1.6
CKS1BP1-201ENST00000555221 CD101Q93033 1021 aa5.07□□□□□ -1.6
CKS1BP1-201ENST00000555221 ATP6V1E2Q96A05 226 aa5.07□□□□□ -1.6
CKS1BP1-201ENST00000555221 OTUB1Q96FW1 271 aaPredicted RBP5.07□□□□□ -1.6
CKS1BP1-201ENST00000555221 ERO1AQ96HE7 468 aa5.07□□□□□ -1.6
CKS1BP1-201ENST00000555221 ARRDC1-AS1Q9H2J1 176 aa5.07□□□□□ -1.6
CKS1BP1-201ENST00000555221 FZD8Q9H461 694 aa5.07□□□□□ -1.6
CKS1BP1-201ENST00000555221 CDH20Q9HBT6 801 aa5.07□□□□□ -1.6
CKS1BP1-201ENST00000555221 ZBTB20Q9HC78 741 aaPredicted RBP5.07□□□□□ -1.6
CKS1BP1-201ENST00000555221 GKN1Q9NS71 199 aa5.07□□□□□ -1.6
CKS1BP1-201ENST00000555221 LRWD1Q9UFC0 647 aa5.07□□□□□ -1.6
CKS1BP1-201ENST00000555221 RNF150Q9ULK6 438 aa5.07□□□□□ -1.6
CKS1BP1-201ENST00000555221 SLC7A7Q9UM01 511 aa5.07□□□□□ -1.6
CKS1BP1-201ENST00000555221 SNX7Q9UNH6 387 aa5.07□□□□□ -1.6
CKS1BP1-201ENST00000555221 POMT1Q9Y6A1 747 aa5.07□□□□□ -1.6
CKS1BP1-201ENST00000555221 E9PI62 339 aa5.06□□□□□ -1.6
CKS1BP1-201ENST00000555221 H0Y626 953 aa5.06□□□□□ -1.6
CKS1BP1-201ENST00000555221 CCER2I3L3R5 266 aa5.06□□□□□ -1.6
CKS1BP1-201ENST00000555221 KCNAB3O43448 404 aa5.06□□□□□ -1.6
CKS1BP1-201ENST00000555221 SIX3O95343 332 aaPredicted RBP5.06□□□□□ -1.6
CKS1BP1-201ENST00000555221 PDGFRAP16234 1089 aa5.06□□□□□ -1.6
CKS1BP1-201ENST00000555221 CYP11B2P19099 503 aa5.06□□□□□ -1.6
CKS1BP1-201ENST00000555221 PTPN3P26045 913 aa5.06□□□□□ -1.6
CKS1BP1-201ENST00000555221 NAGLUP54802 743 aa5.06□□□□□ -1.6
CKS1BP1-201ENST00000555221 MAT1AQ00266 395 aaKnown RBP5.06□□□□□ -1.6
CKS1BP1-201ENST00000555221 TCTE1Q5JU00 501 aa5.06□□□□□ -1.6
CKS1BP1-201ENST00000555221 CCNYL2Q5T2Q4 361 aa5.06□□□□□ -1.6
CKS1BP1-201ENST00000555221 SFMBT2Q5VUG0 894 aa5.06□□□□□ -1.6
CKS1BP1-201ENST00000555221 SHQ1Q6PI26 577 aaKnown RBP5.06□□□□□ -1.6
CKS1BP1-201ENST00000555221 SPATA21Q7Z572 469 aa5.06□□□□□ -1.6
CKS1BP1-201ENST00000555221 GLRX5Q86SX6 157 aa5.06□□□□□ -1.6
CKS1BP1-201ENST00000555221 NFE4Q86UQ8 179 aa5.06□□□□□ -1.6
CKS1BP1-201ENST00000555221 NUDT13Q86X67 352 aa5.06□□□□□ -1.6
CKS1BP1-201ENST00000555221 PLD3Q8IV08 490 aa5.06□□□□□ -1.6
CKS1BP1-201ENST00000555221 TIGD4Q8IY51 512 aa5.06□□□□□ -1.6
CKS1BP1-201ENST00000555221 DMBX1Q8NFW5 382 aa5.06□□□□□ -1.6
CKS1BP1-201ENST00000555221 OR13J1Q8NGT2 312 aa5.06□□□□□ -1.6
CKS1BP1-201ENST00000555221 C9orf43Q8TAL5 461 aaPredicted RBP5.06□□□□□ -1.6
CKS1BP1-201ENST00000555221 IRGQQ8WZA9 623 aa5.06□□□□□ -1.6
CKS1BP1-201ENST00000555221 MYADMQ96S97 322 aa5.06□□□□□ -1.6
CKS1BP1-201ENST00000555221 FN3KQ9H479 309 aa5.06□□□□□ -1.6
CKS1BP1-201ENST00000555221 UPF2Q9HAU5 1272 aaKnown RBP5.06□□□□□ -1.6
CKS1BP1-201ENST00000555221 Q9N2K0 584 aa5.06□□□□□ -1.6
CKS1BP1-201ENST00000555221 ARGLU1Q9NWB6 273 aaPredicted RBP5.06□□□□□ -1.6
CKS1BP1-201ENST00000555221 SPHK1Q9NYA1 384 aa5.06□□□□□ -1.6
CKS1BP1-201ENST00000555221 POLLQ9UGP5 575 aa5.06□□□□□ -1.6
CKS1BP1-201ENST00000555221 JRKLQ9Y4A0 524 aa5.06□□□□□ -1.6
CKS1BP1-201ENST00000555221 A0A1B0GUV1 79 aa5.05□□□□□ -1.6
CKS1BP1-201ENST00000555221 OR6C76A6NM76 312 aa5.05□□□□□ -1.6
CKS1BP1-201ENST00000555221 CLIC2O15247 247 aa5.05□□□□□ -1.6
CKS1BP1-201ENST00000555221 AP5Z1O43299 807 aa5.05□□□□□ -1.6
CKS1BP1-201ENST00000555221 FGF5P12034 268 aa5.05□□□□□ -1.6
CKS1BP1-201ENST00000555221 AMD1P17707 334 aa5.05□□□□□ -1.6
CKS1BP1-201ENST00000555221 MSH3P20585 1137 aa5.05□□□□□ -1.6
CKS1BP1-201ENST00000555221 KRT2P35908 639 aa5.05□□□□□ -1.6
CKS1BP1-201ENST00000555221 GAS1P54826 345 aa5.05□□□□□ -1.6
CKS1BP1-201ENST00000555221 ILF3Q12906 894 aaKnown RBP eCLIP5.05□□□□□ -1.6
CKS1BP1-201ENST00000555221 DMP1Q13316 513 aaPredicted RBP5.05□□□□□ -1.6
CKS1BP1-201ENST00000555221 UGCGQ16739 394 aa5.05□□□□□ -1.6
CKS1BP1-201ENST00000555221 CORO6Q6QEF8 472 aa5.05□□□□□ -1.6
CKS1BP1-201ENST00000555221 MSANTD1Q6ZTZ1 278 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms