RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 AOAHP28039 575 aa12.54□□□□□ -0.4
ACTN1-207ENST00000553290 MAGEA6P43360 314 aa12.54□□□□□ -0.4
ACTN1-207ENST00000553290 CSE1LP55060 971 aaKnown RBP12.54□□□□□ -0.4
ACTN1-207ENST00000553290 GPS1Q13098 491 aa12.54□□□□□ -0.4
ACTN1-207ENST00000553290 KCNJ11Q14654 390 aa12.54□□□□□ -0.4
ACTN1-207ENST00000553290 TMED2Q15363 201 aa12.54□□□□□ -0.4
ACTN1-207ENST00000553290 TRIP13Q15645 432 aaPredicted RBP12.54□□□□□ -0.4
ACTN1-207ENST00000553290 DEFB109BQ30KR1 87 aa12.54□□□□□ -0.4
ACTN1-207ENST00000553290 PTRHD1Q6GMV3 140 aaKnown RBP12.54□□□□□ -0.4
ACTN1-207ENST00000553290 MRNIPQ6NTE8 343 aa12.54□□□□□ -0.4
ACTN1-207ENST00000553290 SDCCAG8Q86SQ7 713 aaPredicted RBP12.54□□□□□ -0.4
ACTN1-207ENST00000553290 LDB1Q86U70 411 aaPredicted RBP12.54□□□□□ -0.4
ACTN1-207ENST00000553290 REXO1L1PQ8IX06 675 aa12.54□□□□□ -0.4
ACTN1-207ENST00000553290 OTUD6BQ8N6M0 293 aa12.54□□□□□ -0.4
ACTN1-207ENST00000553290 MFSD3Q96ES6 412 aa12.54□□□□□ -0.4
ACTN1-207ENST00000553290 LRFN5Q96NI6 719 aa12.54□□□□□ -0.4
ACTN1-207ENST00000553290 P2RY12Q9H244 342 aa12.54□□□□□ -0.4
ACTN1-207ENST00000553290 SERTAD3Q9UJW9 196 aa12.54□□□□□ -0.4
ACTN1-207ENST00000553290 CDYLQ9Y232 598 aa12.54□□□□□ -0.4
ACTN1-207ENST00000553290 TLN1Q9Y490 2541 aaKnown RBP12.54□□□□□ -0.4
ACTN1-207ENST00000553290 TCRBV7S3A2A0A539 114 aa12.53□□□□□ -0.4
ACTN1-207ENST00000553290 IQCF5A8MTL0 148 aa12.53□□□□□ -0.4
ACTN1-207ENST00000553290 PGRMC1O00264 195 aaKnown RBP12.53□□□□□ -0.4
ACTN1-207ENST00000553290 SLCO2B1O94956 709 aa12.53□□□□□ -0.4
ACTN1-207ENST00000553290 VAPBO95292 243 aa12.53□□□□□ -0.4
ACTN1-207ENST00000553290 TPBGLP0DKB5 382 aa12.53□□□□□ -0.4
ACTN1-207ENST00000553290 PVRP15151 417 aa12.53□□□□□ -0.4
ACTN1-207ENST00000553290 UGT2B7P16662 529 aa12.53□□□□□ -0.4
ACTN1-207ENST00000553290 PAMP19021 973 aa12.53□□□□□ -0.4
ACTN1-207ENST00000553290 CYP2A7P20853 494 aa12.53□□□□□ -0.4
ACTN1-207ENST00000553290 COILP38432 576 aaPredicted RBP12.53□□□□□ -0.4
ACTN1-207ENST00000553290 VPS41P49754 854 aa12.53□□□□□ -0.4
ACTN1-207ENST00000553290 RPS15P62841 145 aaKnown RBP12.53□□□□□ -0.4
ACTN1-207ENST00000553290 ERV3-1Q14264 604 aa12.53□□□□□ -0.4
ACTN1-207ENST00000553290 KIR2DS3Q14952 304 aa12.53□□□□□ -0.4
ACTN1-207ENST00000553290 CYP1B1Q16678 543 aa12.53□□□□□ -0.4
ACTN1-207ENST00000553290 KYNUQ16719 465 aa12.53□□□□□ -0.4
ACTN1-207ENST00000553290 RNF187Q5TA31 235 aaPredicted RBP12.53□□□□□ -0.4
ACTN1-207ENST00000553290 TTC27Q6P3X3 843 aa12.53□□□□□ -0.4
ACTN1-207ENST00000553290 FAM199XQ6PEV8 388 aaPredicted RBP12.53□□□□□ -0.4
ACTN1-207ENST00000553290 CCDC137Q6PK04 289 aaKnown RBP12.53□□□□□ -0.4
ACTN1-207ENST00000553290 UNC5DQ6UXZ4 953 aa12.53□□□□□ -0.4
ACTN1-207ENST00000553290 ZNF517Q6ZMY9 492 aaPredicted RBP12.53□□□□□ -0.4
ACTN1-207ENST00000553290 VRK3Q8IV63 474 aa12.53□□□□□ -0.4
ACTN1-207ENST00000553290 DCUN1D3Q8IWE4 304 aa12.53□□□□□ -0.4
ACTN1-207ENST00000553290 KRT222Q8N1A0 295 aa12.53□□□□□ -0.4
ACTN1-207ENST00000553290 C19orf47Q8N9M1 422 aaKnown RBP12.53□□□□□ -0.4
ACTN1-207ENST00000553290 OR1L3Q8NH93 324 aa12.53□□□□□ -0.4
ACTN1-207ENST00000553290 GSDMBQ8TAX9 411 aa12.53□□□□□ -0.4
ACTN1-207ENST00000553290 LKAAEAR1Q8TD35 194 aa12.53□□□□□ -0.4
ACTN1-207ENST00000553290 N4BP2L2Q92802 583 aaPredicted RBP12.53□□□□□ -0.4
ACTN1-207ENST00000553290 MR1Q95460 341 aa12.53□□□□□ -0.4
ACTN1-207ENST00000553290 TCTN2Q96GX1 697 aa12.53□□□□□ -0.4
ACTN1-207ENST00000553290 MS4A14Q96JA4 679 aa12.53□□□□□ -0.4
ACTN1-207ENST00000553290 OR2A14Q96R47 310 aa12.53□□□□□ -0.4
ACTN1-207ENST00000553290 TCF12Q99081 682 aa12.53□□□□□ -0.4
ACTN1-207ENST00000553290 TWSG1Q9GZX9 223 aa12.53□□□□□ -0.4
ACTN1-207ENST00000553290 CHRNA10Q9GZZ6 450 aa12.53□□□□□ -0.4
ACTN1-207ENST00000553290 AKIRIN1Q9H9L7 192 aaPredicted RBP12.53□□□□□ -0.4
ACTN1-207ENST00000553290 POLHQ9Y253 713 aa12.53□□□□□ -0.4
ACTN1-207ENST00000553290 MRFAP1Q9Y605 127 aa12.53□□□□□ -0.4
ACTN1-207ENST00000553290 SPTBP11277 2137 aa12.52□□□□□ -0.4
ACTN1-207ENST00000553290 A0A0J9YY10 115 aa12.52□□□□□ -0.41
ACTN1-207ENST00000553290 MAGEB16A2A368 324 aa12.52□□□□□ -0.41
ACTN1-207ENST00000553290 CDC14CA4D256 554 aa12.52□□□□□ -0.41
ACTN1-207ENST00000553290 ISM1B1AKI9 464 aa12.52□□□□□ -0.41
ACTN1-207ENST00000553290 E7EQ34 232 aa12.52□□□□□ -0.41
ACTN1-207ENST00000553290 MEN1O00255 615 aa12.52□□□□□ -0.41
ACTN1-207ENST00000553290 SLC28A2O43868 658 aa12.52□□□□□ -0.41
ACTN1-207ENST00000553290 HBQ1P09105 142 aa12.52□□□□□ -0.41
ACTN1-207ENST00000553290 MLNP12872 115 aa12.52□□□□□ -0.41
ACTN1-207ENST00000553290 ARNTP27540 789 aa12.52□□□□□ -0.41
ACTN1-207ENST00000553290 PTPN4P29074 926 aa12.52□□□□□ -0.41
ACTN1-207ENST00000553290 RAB28P51157 221 aa12.52□□□□□ -0.41
ACTN1-207ENST00000553290 TERF1P54274 439 aa12.52□□□□□ -0.41
ACTN1-207ENST00000553290 EIF3BP55884 814 aaKnown RBP12.52□□□□□ -0.41
ACTN1-207ENST00000553290 ITGA1P56199 1179 aa12.52□□□□□ -0.41
ACTN1-207ENST00000553290 ABRQ12979 859 aa12.52□□□□□ -0.41
ACTN1-207ENST00000553290 GPS2Q13227 327 aa12.52□□□□□ -0.41
ACTN1-207ENST00000553290 SLC5A12Q1EHB4 618 aa12.52□□□□□ -0.41
ACTN1-207ENST00000553290 PLEKHS1Q5SXH7 462 aa12.52□□□□□ -0.41
ACTN1-207ENST00000553290 ATP1A1-AS1Q5TC04 95 aa12.52□□□□□ -0.41
ACTN1-207ENST00000553290 IZUMO3Q5VZ72 239 aa12.52□□□□□ -0.41
ACTN1-207ENST00000553290 KIAA0930Q6ICG6 404 aaPredicted RBP12.52□□□□□ -0.41
ACTN1-207ENST00000553290 CASC4Q6P4E1 433 aa12.52□□□□□ -0.41
ACTN1-207ENST00000553290 TTC23LQ6PF05 361 aa12.52□□□□□ -0.41
ACTN1-207ENST00000553290 CDHR3Q6ZTQ4 885 aa12.52□□□□□ -0.41
ACTN1-207ENST00000553290 OTOAQ7RTW8 1153 aa12.52□□□□□ -0.41
ACTN1-207ENST00000553290 PRICKLE2Q7Z3G6 844 aa12.52□□□□□ -0.41
ACTN1-207ENST00000553290 SYVN1Q86TM6 617 aa12.52□□□□□ -0.41
ACTN1-207ENST00000553290 GPR135Q8IZ08 494 aa12.52□□□□□ -0.41
ACTN1-207ENST00000553290 DSELQ8IZU8 1212 aa12.52□□□□□ -0.41
ACTN1-207ENST00000553290 SLC35F6Q8N357 371 aa12.52□□□□□ -0.41
ACTN1-207ENST00000553290 SLC38A9Q8NBW4 561 aa12.52□□□□□ -0.41
ACTN1-207ENST00000553290 MCUQ8NE86 351 aa12.52□□□□□ -0.41
ACTN1-207ENST00000553290 CFAP61Q8NHU2 1237 aa12.52□□□□□ -0.41
ACTN1-207ENST00000553290 C9orf43Q8TAL5 461 aaPredicted RBP12.52□□□□□ -0.41
ACTN1-207ENST00000553290 ACTRT1Q8TDG2 376 aa12.52□□□□□ -0.41
ACTN1-207ENST00000553290 GRK7Q8WTQ7 553 aa12.52□□□□□ -0.41
ACTN1-207ENST00000553290 CLIP3Q96DZ5 547 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms