RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 RGS7P49802 495 aa4.8□□□□□ -1.64
SCFD1-209ENST00000553280 KHKP50053 298 aa4.8□□□□□ -1.64
SCFD1-209ENST00000553280 PEX5P50542 639 aa4.8□□□□□ -1.64
SCFD1-209ENST00000553280 ST8SIA6P61647 398 aa4.8□□□□□ -1.64
SCFD1-209ENST00000553280 MAT1AQ00266 395 aaKnown RBP4.8□□□□□ -1.64
SCFD1-209ENST00000553280 PRKAA1Q13131 559 aa4.8□□□□□ -1.64
SCFD1-209ENST00000553280 CUL3Q13618 768 aa4.8□□□□□ -1.64
SCFD1-209ENST00000553280 NFATC4Q14934 902 aa4.8□□□□□ -1.64
SCFD1-209ENST00000553280 PKN2Q16513 984 aaKnown RBP4.8□□□□□ -1.64
SCFD1-209ENST00000553280 SYT14P1Q58G82 188 aa4.8□□□□□ -1.64
SCFD1-209ENST00000553280 TCTE1Q5JU00 501 aa4.8□□□□□ -1.64
SCFD1-209ENST00000553280 CCDC158Q5M9N0 1113 aa4.8□□□□□ -1.64
SCFD1-209ENST00000553280 TXNRD3NBQ6F5E7 133 aa4.8□□□□□ -1.64
SCFD1-209ENST00000553280 RHBDF2Q6PJF5 856 aa4.8□□□□□ -1.64
SCFD1-209ENST00000553280 GFRALQ6UXV0 394 aa4.8□□□□□ -1.64
SCFD1-209ENST00000553280 NHLRC1Q6VVB1 395 aa4.8□□□□□ -1.64
SCFD1-209ENST00000553280 ASB18Q6ZVZ8 466 aa4.8□□□□□ -1.64
SCFD1-209ENST00000553280 PLEKHM3Q6ZWE6 761 aa4.8□□□□□ -1.64
SCFD1-209ENST00000553280 GET4Q7L5D6 327 aaPredicted RBP4.8□□□□□ -1.64
SCFD1-209ENST00000553280 NUP54Q7Z3B4 507 aa4.8□□□□□ -1.64
SCFD1-209ENST00000553280 FJX1Q86VR8 437 aa4.8□□□□□ -1.64
SCFD1-209ENST00000553280 PTOV1Q86YD1 416 aa4.8□□□□□ -1.64
SCFD1-209ENST00000553280 FAM114A1Q8IWE2 563 aa4.8□□□□□ -1.64
SCFD1-209ENST00000553280 UXS1Q8NBZ7 420 aa4.8□□□□□ -1.64
SCFD1-209ENST00000553280 PPFIBP2Q8ND30 876 aa4.8□□□□□ -1.64
SCFD1-209ENST00000553280 RDM1Q8NG50 284 aa4.8□□□□□ -1.64
SCFD1-209ENST00000553280 CCDC47Q96A33 483 aaKnown RBP4.8□□□□□ -1.64
SCFD1-209ENST00000553280 DHX58Q96C10 678 aa4.8□□□□□ -1.64
SCFD1-209ENST00000553280 ATP6V0BQ99437 205 aa4.8□□□□□ -1.64
SCFD1-209ENST00000553280 PI4K2AQ9BTU6 479 aa4.8□□□□□ -1.64
SCFD1-209ENST00000553280 DNAJC4Q9NNZ3 241 aa4.8□□□□□ -1.64
SCFD1-209ENST00000553280 ACKR4Q9NPB9 350 aa4.8□□□□□ -1.64
SCFD1-209ENST00000553280 SERINC1Q9NRX5 453 aa4.8□□□□□ -1.64
SCFD1-209ENST00000553280 ZNF224Q9NZL3 707 aa4.8□□□□□ -1.64
SCFD1-209ENST00000553280 B3GAT1Q9P2W7 334 aa4.8□□□□□ -1.64
SCFD1-209ENST00000553280 LRWD1Q9UFC0 647 aa4.8□□□□□ -1.64
SCFD1-209ENST00000553280 PCDHGA1Q9Y5H4 931 aa4.8□□□□□ -1.64
SCFD1-209ENST00000553280 SPIN1Q9Y657 262 aaPredicted RBP4.8□□□□□ -1.64
SCFD1-209ENST00000553280 TEX13DA0A0J9YY54 714 aaPredicted RBP4.79□□□□□ -1.64
SCFD1-209ENST00000553280 HYKKA2RU49 373 aa4.79□□□□□ -1.64
SCFD1-209ENST00000553280 GTPBP10A4D1E9 387 aaKnown RBP4.79□□□□□ -1.64
SCFD1-209ENST00000553280 CLEC18AA5D8T8 446 aa4.79□□□□□ -1.64
SCFD1-209ENST00000553280 SDR42E2A6NKP2 422 aa4.79□□□□□ -1.64
SCFD1-209ENST00000553280 EIF3DO15371 548 aaKnown RBP eCLIP4.79□□□□□ -1.64
SCFD1-209ENST00000553280 ZNHIT1O43257 154 aa4.79□□□□□ -1.64
SCFD1-209ENST00000553280 SELENOFO60613 162 aa4.79□□□□□ -1.64
SCFD1-209ENST00000553280 WDR1O75083 606 aa4.79□□□□□ -1.64
SCFD1-209ENST00000553280 PGLSO95336 258 aa4.79□□□□□ -1.64
SCFD1-209ENST00000553280 H1F0P07305 194 aaKnown RBP4.79□□□□□ -1.64
SCFD1-209ENST00000553280 LINC00271P0C7V0 271 aa4.79□□□□□ -1.64
SCFD1-209ENST00000553280 SPP1P10451 314 aa4.79□□□□□ -1.64
SCFD1-209ENST00000553280 CSF2RAP15509 400 aa4.79□□□□□ -1.64
SCFD1-209ENST00000553280 SLC6A6P31641 620 aa4.79□□□□□ -1.64
SCFD1-209ENST00000553280 ARRB2P32121 409 aa4.79□□□□□ -1.64
SCFD1-209ENST00000553280 GNL1P36915 607 aaPredicted RBP4.79□□□□□ -1.64
SCFD1-209ENST00000553280 HSD17B3P37058 310 aa4.79□□□□□ -1.64
SCFD1-209ENST00000553280 PSMC4P43686 418 aa4.79□□□□□ -1.64
SCFD1-209ENST00000553280 PCYT1AP49585 367 aa4.79□□□□□ -1.64
SCFD1-209ENST00000553280 ISL1P61371 349 aa4.79□□□□□ -1.64
SCFD1-209ENST00000553280 EEF1A1P68104 462 aaKnown RBP4.79□□□□□ -1.64
SCFD1-209ENST00000553280 MYBPHQ13203 477 aa4.79□□□□□ -1.64
SCFD1-209ENST00000553280 GTF2H2Q13888 395 aa4.79□□□□□ -1.64
SCFD1-209ENST00000553280 TAZQ16635 292 aa4.79□□□□□ -1.64
SCFD1-209ENST00000553280 SLC39A12Q504Y0 691 aa4.79□□□□□ -1.64
SCFD1-209ENST00000553280 ZNF789Q5FWF6 425 aa4.79□□□□□ -1.64
SCFD1-209ENST00000553280 LRRC73Q5JTD7 316 aa4.79□□□□□ -1.64
SCFD1-209ENST00000553280 EEF1A1P5Q5VTE0 462 aa4.79□□□□□ -1.64
SCFD1-209ENST00000553280 GTF2H2CQ6P1K8 395 aa4.79□□□□□ -1.64
SCFD1-209ENST00000553280 TMEM219Q86XT9 240 aa4.79□□□□□ -1.64
SCFD1-209ENST00000553280 CLYBLQ8N0X4 340 aa4.79□□□□□ -1.64
SCFD1-209ENST00000553280 ARHGAP24Q8N264 748 aa4.79□□□□□ -1.64
SCFD1-209ENST00000553280 CPSF7Q8N684 471 aaKnown RBP4.79□□□□□ -1.64
SCFD1-209ENST00000553280 L3MBTL4Q8NA19 623 aa4.79□□□□□ -1.64
SCFD1-209ENST00000553280 CLEC18CQ8NCF0 446 aa4.79□□□□□ -1.64
SCFD1-209ENST00000553280 B4GALNT2Q8NHY0 566 aa4.79□□□□□ -1.64
SCFD1-209ENST00000553280 RNF128Q8TEB7 428 aa4.79□□□□□ -1.64
SCFD1-209ENST00000553280 SCARB1Q8WTV0 552 aa4.79□□□□□ -1.64
SCFD1-209ENST00000553280 CDCA5Q96FF9 252 aa4.79□□□□□ -1.64
SCFD1-209ENST00000553280 STAMBPL1Q96FJ0 436 aa4.79□□□□□ -1.64
SCFD1-209ENST00000553280 BSCL2Q96G97 398 aaPredicted RBP4.79□□□□□ -1.64
SCFD1-209ENST00000553280 AK8Q96MA6 479 aa4.79□□□□□ -1.64
SCFD1-209ENST00000553280 HNRNPABQ99729 332 aaKnown RBP4.79□□□□□ -1.64
SCFD1-209ENST00000553280 DNAJC17Q9NVM6 304 aaKnown RBP4.79□□□□□ -1.64
SCFD1-209ENST00000553280 OR2W1Q9Y3N9 320 aa4.79□□□□□ -1.64
SCFD1-209ENST00000553280 IGLV5-37A0A075B6J1 123 aa4.78□□□□□ -1.64
SCFD1-209ENST00000553280 A0A1W2PPK0 400 aa4.78□□□□□ -1.64
SCFD1-209ENST00000553280 C5orf60A6NFR6 353 aa4.78□□□□□ -1.64
SCFD1-209ENST00000553280 DUXAA6NLW8 204 aa4.78□□□□□ -1.64
SCFD1-209ENST00000553280 H3BNX3 289 aa4.78□□□□□ -1.64
SCFD1-209ENST00000553280 ST8SIA3O43173 380 aa4.78□□□□□ -1.64
SCFD1-209ENST00000553280 FCGR3BO75015 233 aa4.78□□□□□ -1.64
SCFD1-209ENST00000553280 LUC7L3O95232 432 aaKnown RBP4.78□□□□□ -1.64
SCFD1-209ENST00000553280 OLFM2O95897 454 aa4.78□□□□□ -1.64
SCFD1-209ENST00000553280 TFAP2AP05549 437 aa4.78□□□□□ -1.64
SCFD1-209ENST00000553280 SMIM18P0DKX4 95 aa4.78□□□□□ -1.64
SCFD1-209ENST00000553280 EPCAMP16422 314 aa4.78□□□□□ -1.64
SCFD1-209ENST00000553280 ITIH1P19827 911 aa4.78□□□□□ -1.64
SCFD1-209ENST00000553280 PSMB4P28070 264 aa4.78□□□□□ -1.64
SCFD1-209ENST00000553280 PTGER4P35408 488 aa4.78□□□□□ -1.64
SCFD1-209ENST00000553280 USP8P40818 1118 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms