RNA–Protein interactions for RNA: ENST00000548211.1

RPAP3-205, Transcript of RNA polymerase II associated protein 3, human

TSL 2

Gene RPAP3, Length 555 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPAP3-205	ENST00000548211	ZNF667	Q5HYK9	610 aa		3.44	□□□□□ -1.86
RPAP3-205	ENST00000548211	ZC2HC1B	Q5TFG8	222 aa		3.44	□□□□□ -1.86
RPAP3-205	ENST00000548211	HIST2H2BD	Q6DRA6	164 aa		3.44	□□□□□ -1.86
RPAP3-205	ENST00000548211	CTR9	Q6PD62	1173 aa		3.44	□□□□□ -1.86
RPAP3-205	ENST00000548211	CEACAM20	Q6UY09	585 aa		3.44	□□□□□ -1.86
RPAP3-205	ENST00000548211	SEPT14	Q6ZU15	432 aa		3.44	□□□□□ -1.86
RPAP3-205	ENST00000548211	ADGRD2	Q7Z7M1	963 aa		3.44	□□□□□ -1.86
RPAP3-205	ENST00000548211	AACS	Q86V21	672 aa		3.44	□□□□□ -1.86
RPAP3-205	ENST00000548211	THNSL1	Q8IYQ7	743 aa		3.44	□□□□□ -1.86
RPAP3-205	ENST00000548211	ZNF248	Q8NDW4	579 aa		3.44	□□□□□ -1.86
RPAP3-205	ENST00000548211	STAM	Q92783	540 aa		3.44	□□□□□ -1.86
RPAP3-205	ENST00000548211	ZNF689	Q96CS4	500 aa	Predicted RBP	3.44	□□□□□ -1.86
RPAP3-205	ENST00000548211	SCLT1	Q96NL6	688 aa		3.44	□□□□□ -1.86
RPAP3-205	ENST00000548211	CMKLR1	Q99788	373 aa		3.44	□□□□□ -1.86
RPAP3-205	ENST00000548211	NACAP1	Q9BZK3	213 aa		3.44	□□□□□ -1.86
RPAP3-205	ENST00000548211	S1PR5	Q9H228	398 aa		3.44	□□□□□ -1.86
RPAP3-205	ENST00000548211	RANBP17	Q9H2T7	1088 aa	Known RBP	3.44	□□□□□ -1.86
RPAP3-205	ENST00000548211	PLCB1	Q9NQ66	1216 aa		3.44	□□□□□ -1.86
RPAP3-205	ENST00000548211	SNTG1	Q9NSN8	517 aa		3.44	□□□□□ -1.86
RPAP3-205	ENST00000548211	ZNF215	Q9UL58	517 aa	Predicted RBP	3.44	□□□□□ -1.86
RPAP3-205	ENST00000548211	RAB23	Q9ULC3	237 aa		3.44	□□□□□ -1.86
RPAP3-205	ENST00000548211	DUSP12	Q9UNI6	340 aa		3.44	□□□□□ -1.86
RPAP3-205	ENST00000548211	STON1	Q9Y6Q2	735 aa		3.44	□□□□□ -1.86
RPAP3-205	ENST00000548211		R4GN57	208 aa		3.44	□□□□□ -1.86
RPAP3-205	ENST00000548211	ZBED9	Q6R2W3	1325 aa		3.44	□□□□□ -1.86
RPAP3-205	ENST00000548211	CCDC171	Q6TFL3	1326 aa		3.44	□□□□□ -1.86
RPAP3-205	ENST00000548211	WDR19	Q8NEZ3	1342 aa		3.44	□□□□□ -1.86
RPAP3-205	ENST00000548211	CNOT1	A5YKK6	2376 aa	Known RBP	3.43	□□□□□ -1.86
RPAP3-205	ENST00000548211	IGKV6D-41	A0A0C4DH26	115 aa		3.43	□□□□□ -1.86
RPAP3-205	ENST00000548211	TMEM8B	A6NDV4	472 aa		3.43	□□□□□ -1.86
RPAP3-205	ENST00000548211	C2CD4D	B7Z1M9	353 aa		3.43	□□□□□ -1.86
RPAP3-205	ENST00000548211	AKR1B15	C9JRZ8	316 aa	Predicted RBP	3.43	□□□□□ -1.86
RPAP3-205	ENST00000548211	SLC30A4	O14863	429 aa		3.43	□□□□□ -1.86
RPAP3-205	ENST00000548211	BCAT2	O15382	392 aa	Predicted RBP	3.43	□□□□□ -1.86
RPAP3-205	ENST00000548211	KLK10	O43240	276 aa		3.43	□□□□□ -1.86
RPAP3-205	ENST00000548211	PRKAB2	O43741	272 aa		3.43	□□□□□ -1.86
RPAP3-205	ENST00000548211	PROS1	P07225	676 aa		3.43	□□□□□ -1.86
RPAP3-205	ENST00000548211	ZNF286B	P0CG31	522 aa		3.43	□□□□□ -1.86
RPAP3-205	ENST00000548211	SP9	P0CG40	484 aa		3.43	□□□□□ -1.86
RPAP3-205	ENST00000548211	RNF224	P0DH78	156 aa		3.43	□□□□□ -1.86
RPAP3-205	ENST00000548211	AGA	P20933	346 aa		3.43	□□□□□ -1.86
RPAP3-205	ENST00000548211	MCC	P23508	829 aa		3.43	□□□□□ -1.86
RPAP3-205	ENST00000548211	GNL1	P36915	607 aa	Predicted RBP	3.43	□□□□□ -1.86
RPAP3-205	ENST00000548211	USP8	P40818	1118 aa		3.43	□□□□□ -1.86
RPAP3-205	ENST00000548211	CASP2	P42575	452 aa		3.43	□□□□□ -1.86
RPAP3-205	ENST00000548211	TDO2	P48775	406 aa		3.43	□□□□□ -1.86
RPAP3-205	ENST00000548211	CLCNKA	P51800	687 aa		3.43	□□□□□ -1.86
RPAP3-205	ENST00000548211	HNRNPH2	P55795	449 aa	Known RBP	3.43	□□□□□ -1.86
RPAP3-205	ENST00000548211	SMC1A	Q14683	1233 aa	Known RBP	3.43	□□□□□ -1.86
RPAP3-205	ENST00000548211	LPAL2	Q16609	132 aa		3.43	□□□□□ -1.86
RPAP3-205	ENST00000548211	C2orf68	Q2NKX9	166 aa		3.43	□□□□□ -1.86
RPAP3-205	ENST00000548211	PDSS1	Q5T2R2	415 aa		3.43	□□□□□ -1.86
RPAP3-205	ENST00000548211	ASB18	Q6ZVZ8	466 aa		3.43	□□□□□ -1.86
RPAP3-205	ENST00000548211	NOTCH2NL	Q7Z3S9	236 aa		3.43	□□□□□ -1.86
RPAP3-205	ENST00000548211	GPAT4	Q86UL3	456 aa		3.43	□□□□□ -1.86
RPAP3-205	ENST00000548211	MYLK4	Q86YV6	388 aa	Predicted RBP	3.43	□□□□□ -1.86
RPAP3-205	ENST00000548211	SLC35F3	Q8IY50	421 aa		3.43	□□□□□ -1.86
RPAP3-205	ENST00000548211	RNF113B	Q8IZP6	322 aa	Known RBP	3.43	□□□□□ -1.86
RPAP3-205	ENST00000548211	DCLK2	Q8N568	766 aa		3.43	□□□□□ -1.86
RPAP3-205	ENST00000548211	CCDC89	Q8N998	374 aa		3.43	□□□□□ -1.86
RPAP3-205	ENST00000548211	SUMF1	Q8NBK3	374 aa		3.43	□□□□□ -1.86
RPAP3-205	ENST00000548211	ADAD2	Q8NCV1	583 aa	Known RBP	3.43	□□□□□ -1.86
RPAP3-205	ENST00000548211	C1orf131	Q8NDD1	294 aa	Known RBP	3.43	□□□□□ -1.86
RPAP3-205	ENST00000548211	SPATA33	Q96N06	139 aa		3.43	□□□□□ -1.86
RPAP3-205	ENST00000548211	HERPUD2	Q9BSE4	406 aa		3.43	□□□□□ -1.86
RPAP3-205	ENST00000548211	FAM167B	Q9BTA0	163 aa		3.43	□□□□□ -1.86
RPAP3-205	ENST00000548211	LRRC1	Q9BTT6	524 aa		3.43	□□□□□ -1.86
RPAP3-205	ENST00000548211	POLR3C	Q9BUI4	534 aa	Predicted RBP	3.43	□□□□□ -1.86
RPAP3-205	ENST00000548211	POMK	Q9H5K3	350 aa		3.43	□□□□□ -1.86
RPAP3-205	ENST00000548211	PEMT	Q9UBM1	199 aa		3.43	□□□□□ -1.86
RPAP3-205	ENST00000548211	STX8	Q9UNK0	236 aa		3.43	□□□□□ -1.86
RPAP3-205	ENST00000548211	GTF2A1L	Q9UNN4	478 aa		3.43	□□□□□ -1.86
RPAP3-205	ENST00000548211	CARD8	Q9Y2G2	431 aa		3.43	□□□□□ -1.86
RPAP3-205	ENST00000548211	AMDHD2	Q9Y303	409 aa		3.43	□□□□□ -1.86
RPAP3-205	ENST00000548211	USP24	Q9UPU5	2620 aa		3.43	□□□□□ -1.86
RPAP3-205	ENST00000548211	ANKRD11	Q6UB99	2663 aa	Predicted RBP	3.43	□□□□□ -1.86
RPAP3-205	ENST00000548211	NRCAM	Q92823	1304 aa		3.43	□□□□□ -1.86
RPAP3-205	ENST00000548211	VWA3A	A6NCI4	1184 aa		3.42	□□□□□ -1.86
RPAP3-205	ENST00000548211	TSPY2	A6NKD2	308 aa		3.42	□□□□□ -1.86
RPAP3-205	ENST00000548211	NCAM2	O15394	837 aa		3.42	□□□□□ -1.86
RPAP3-205	ENST00000548211	PI15	O43692	258 aa		3.42	□□□□□ -1.86
RPAP3-205	ENST00000548211	MMP2	P08253	660 aa		3.42	□□□□□ -1.86
RPAP3-205	ENST00000548211	SMIM10L2A	P0DMW4	78 aa		3.42	□□□□□ -1.86
RPAP3-205	ENST00000548211	SMIM10L2B	P0DMW5	78 aa		3.42	□□□□□ -1.86
RPAP3-205	ENST00000548211	HSPD1	P10809	573 aa	Known RBP	3.42	□□□□□ -1.86
RPAP3-205	ENST00000548211	GHR	P10912	638 aa		3.42	□□□□□ -1.86
RPAP3-205	ENST00000548211	SCG2	P13521	617 aa		3.42	□□□□□ -1.86
RPAP3-205	ENST00000548211	PAX1	P15863	534 aa		3.42	□□□□□ -1.86
RPAP3-205	ENST00000548211	CD58	P19256	250 aa		3.42	□□□□□ -1.86
RPAP3-205	ENST00000548211	DNAJB1	P25685	340 aa		3.42	□□□□□ -1.86
RPAP3-205	ENST00000548211	HOXC8	P31273	242 aa		3.42	□□□□□ -1.86
RPAP3-205	ENST00000548211	HAL	P42357	657 aa		3.42	□□□□□ -1.86
RPAP3-205	ENST00000548211	TFAP4	Q01664	338 aa		3.42	□□□□□ -1.86
RPAP3-205	ENST00000548211	KCNC3	Q14003	757 aa		3.42	□□□□□ -1.86
RPAP3-205	ENST00000548211	SLC1A5	Q15758	541 aa		3.42	□□□□□ -1.86
RPAP3-205	ENST00000548211	SIRPB2	Q5JXA9	342 aa		3.42	□□□□□ -1.86
RPAP3-205	ENST00000548211	CELF3	Q5SZQ8	465 aa	Known RBP	3.42	□□□□□ -1.86
RPAP3-205	ENST00000548211	SERTAD4-AS1	Q5TG53	156 aa		3.42	□□□□□ -1.86
RPAP3-205	ENST00000548211	ARHGEF16	Q5VV41	709 aa		3.42	□□□□□ -1.86
RPAP3-205	ENST00000548211	PLPP4	Q5VZY2	271 aa		3.42	□□□□□ -1.86

Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms