RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 DNAJB9Q9UBS3 223 aa5.09□□□□□ -1.59
ATPAF1-212ENST00000542495 AP3M1Q9Y2T2 418 aa5.09□□□□□ -1.59
ATPAF1-212ENST00000542495 NAALAD2Q9Y3Q0 740 aa5.09□□□□□ -1.59
ATPAF1-212ENST00000542495 OARD1Q9Y530 152 aa5.09□□□□□ -1.59
ATPAF1-212ENST00000542495 OR51B4Q9Y5P0 310 aa5.09□□□□□ -1.59
ATPAF1-212ENST00000542495 CROCCQ5TZA2 2017 aa5.09□□□□□ -1.59
ATPAF1-212ENST00000542495 A0A1W2PPW3 197 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 E5RI56 91 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 CBX4O00257 560 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 SLC28A1O00337 649 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 RAD51BO15315 384 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 RGS14O43566 566 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 PFDN1O60925 122 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 SCELO95171 688 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 KCNH1O95259 989 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 PGLSO95336 258 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 PRAMEF12O95522 483 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 ALDH2P05091 517 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 IL6P05231 212 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 RETP07949 1114 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 CNPP09543 421 aaKnown RBP5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 HMGA1P17096 107 aaKnown RBP5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 HOXB9P17482 250 aaPredicted RBP5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 HOXB6P17509 224 aaKnown RBP5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 CD247P20963 164 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 MATN1P21941 496 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 GSTM2P28161 218 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 ELK4P28324 431 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 CORO1AP31146 461 aaKnown RBP5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 CA5AP35218 305 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 CASP2P42575 452 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 MTHFRP42898 656 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 YAP1P46937 504 aaKnown RBP5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 HNRNPFP52597 415 aaKnown RBP5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 GABARAPL2P60520 117 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 CHRNB3Q05901 458 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 CYP4F3Q08477 520 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 ELAVL2Q12926 359 aaKnown RBP5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 EPS8Q12929 822 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 NFATC3Q12968 1075 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 MAD2L1Q13257 205 aaPredicted RBP5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 PLCL1Q15111 1095 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 MOGQ16653 247 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 CDKN3Q16667 212 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 AAK1Q2M2I8 961 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 RUNDC3AQ59EK9 446 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 FGD3Q5JSP0 725 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 HECTD3Q5T447 861 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 ADGRF1Q5T601 910 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 GPRC6AQ5T6X5 926 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 BROXQ5VW32 411 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 TTC23Q5W5X9 447 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 ATG9BQ674R7 924 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 SULT1C3Q6IMI6 304 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 LAIR2Q6ISS4 152 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 SLC8B1Q6J4K2 584 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 ANKRD26P1Q6NSI1 321 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 TMEM214Q6NUQ4 689 aaKnown RBP5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 MILR1Q7Z6M3 343 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 GPR149Q86SP6 731 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 CHPFQ8IZ52 775 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 SVOPLQ8N434 492 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 FAM86B1Q8N7N1 296 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 EFHBQ8N7U6 833 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 DCBLD1Q8N8Z6 715 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 OR2T12Q8NG77 320 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 DNAJB8Q8NHS0 232 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 FBLIM1Q8WUP2 373 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 NUDT8Q8WV74 236 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 PIH1D2Q8WWB5 315 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 SNX19Q92543 992 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 USP7Q93009 1102 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 POP5Q969H6 163 aaKnown RBP5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 BORCS5Q969J3 196 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 ACDQ96AP0 544 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 CCDC74AQ96AQ1 378 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 TBC1D20Q96BZ9 403 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 RHBDF1Q96CC6 855 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 HSPBAP1Q96EW2 488 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 ALG14Q96F25 216 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 HHIPQ96QV1 700 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 SH3GL1Q99961 368 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 TMEM175Q9BSA9 504 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 NTMT1Q9BV86 223 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 KLF16Q9BXK1 252 aaPredicted RBP5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 CD244Q9BZW8 370 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 AMBRA1Q9C0C7 1298 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 NAA50Q9GZZ1 169 aaKnown RBP5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 TNKS2Q9H2K2 1166 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 IKZF5Q9H5V7 419 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 NSUN3Q9H649 340 aaKnown RBP5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 CLMPQ9H6B4 373 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 MAGIXQ9H6Y5 334 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 IPPKQ9H8X2 491 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 GPN2Q9H9Y4 310 aaPredicted RBP5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 RDH14Q9HBH5 336 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 PALMDQ9NP74 551 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 HPS4Q9NQG7 708 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 LATS2Q9NRM7 1088 aa5.09□□□□□ -1.6
ATPAF1-212ENST00000542495 FAM118AQ9NWS6 357 aa5.09□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms