RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 TLCD1Q96CP7 247 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 DEFB118Q96PH6 123 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 ULBP1Q9BZM6 244 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 SLITRK2Q9H156 845 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 ARNT2Q9HBZ2 717 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 BPIFA1Q9NP55 256 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 ABCC13Q9NSE7 274 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 SLC17A7Q9P2U7 560 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 FETUBQ9UGM5 382 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 ENOPH1Q9UHY7 261 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 SLC27A5Q9Y2P5 690 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 HRH3Q9Y5N1 445 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 ATRNL1Q5VV63 1379 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 A0A1W2PPM1 405 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 ADH1AP07327 375 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 CD63P08962 238 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 COX7A2P14406 83 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 PSMA1P25786 263 aaKnown RBP6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 AFF3P51826 1226 aaKnown RBP6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 NRG3P56975 720 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 AP3S2P59780 193 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 ZNF33BQ06732 778 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 SMARCB1Q12824 385 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 NTRK3Q16288 839 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 SIMC1Q8NDZ2 872 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 HTR3CQ8WXA8 447 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 EXOSC8Q96B26 276 aaKnown RBP6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 BORCS6Q96GS4 357 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 NMRAL1Q9HBL8 299 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 OPTCQ9UBM4 332 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 GULP1Q9UBP9 304 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 IRAK3Q9Y616 596 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 NWD2Q9ULI1 1742 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 TOR1AO14656 332 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 SNAPC5O75971 98 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 CXCL14O95715 111 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 SMIM10L2AP0DMW4 78 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 SMIM10L2BP0DMW5 78 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 HTR1BP28222 390 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 MTHFRP42898 656 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 LIMK1P53667 647 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 TMBIM6P55061 237 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 RIPPLY1Q0D2K3 151 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 FADDQ13158 208 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 SNTA1Q13424 505 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 ZNF674Q2M3X9 581 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 WSCD1Q658N2 575 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 ZNF705AQ6ZN79 300 aaPredicted RBP6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 ZFP82Q8N141 532 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 SCML4Q8N228 414 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 ATP6V1C2Q8NEY4 427 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 LPGAT1Q92604 370 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 COPS5Q92905 334 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 SLC39A13Q96H72 371 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 TM6SF2Q9BZW4 377 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 POLR1EQ9GZS1 481 aaKnown RBP6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 EPB41L4BQ9H329 900 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 TIGARQ9NQ88 270 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 MTMR10Q9NXD2 777 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 ARHGAP28Q9P2N2 729 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 KCNIP3Q9Y2W7 256 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 ASB4Q9Y574 426 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 LYVE1Q9Y5Y7 322 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 TRAV6A0A075B6T7 132 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 A0A096LPI6 279 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 MT-ND1P03886 318 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 SYN1P17600 705 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 HOXC8P31273 242 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 SLC7A2P52569 658 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 CDH4P55283 916 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 ABRQ12979 859 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 GRTP1Q5TC63 336 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 ZDHHC17Q8IUH5 632 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 ABRAQ8N0Z2 381 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 TMEM132CQ8N3T6 1108 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 INO80EQ8NBZ0 244 aaPredicted RBP6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 NCSTNQ92542 709 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 ZBTB45Q96K62 511 aaPredicted RBP6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 TNKS2Q9H2K2 1166 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 POMKQ9H5K3 350 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 CERS4Q9HA82 394 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 ELL3Q9HB65 397 aaPredicted RBP6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 POPDC2Q9HBU9 364 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 TRPS1Q9UHF7 1281 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 SLC25A12O75746 678 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 CDK1P06493 297 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 DNASE1P24855 282 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 GRK5P34947 590 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 SPAM1P38567 509 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 STXBP1P61764 594 aaKnown RBP6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 HSPA14Q0VDF9 509 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 FAM205BPQ63HN1 556 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 ELP2Q6IA86 826 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 IL27RAQ6UWB1 636 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 CXXC5Q7LFL8 322 aaKnown RBP6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 GPSM1Q86YR5 675 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 LENG9Q96B70 501 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 SLC47A1Q96FL8 570 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 MAP6Q96JE9 813 aa6.85□□□□□ -1.31
TGFBR3-210ENST00000533089 C12orf42Q96LP6 360 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms