RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 LRRC6Q86X45 466 aa16.69■□□□□ 0.26
PHRF1-204ENST00000532550 KRT222Q8N1A0 295 aa16.69■□□□□ 0.26
PHRF1-204ENST00000532550 CFAP61Q8NHU2 1237 aa16.69■□□□□ 0.26
PHRF1-204ENST00000532550 ACTRT1Q8TDG2 376 aa16.69■□□□□ 0.26
PHRF1-204ENST00000532550 TRAPPC9Q96Q05 1148 aa16.69■□□□□ 0.26
PHRF1-204ENST00000532550 PITPNM3Q9BZ71 974 aa16.69■□□□□ 0.26
PHRF1-204ENST00000532550 GEMIN8Q9NWZ8 242 aaKnown RBP16.69■□□□□ 0.26
PHRF1-204ENST00000532550 OR6C2Q9NZP2 312 aa16.69■□□□□ 0.26
PHRF1-204ENST00000532550 SAMD15Q9P1V8 674 aa16.69■□□□□ 0.26
PHRF1-204ENST00000532550 SERTAD3Q9UJW9 196 aa16.69■□□□□ 0.26
PHRF1-204ENST00000532550 ZNF462Q96JM2 2506 aa16.68■□□□□ 0.26
PHRF1-204ENST00000532550 CFAP46Q8IYW2 2715 aa16.68■□□□□ 0.26
PHRF1-204ENST00000532550 GOLGA6L10A0A0M3HER8 536 aa16.68■□□□□ 0.26
PHRF1-204ENST00000532550 C21orf140B9A014 251 aa16.68■□□□□ 0.26
PHRF1-204ENST00000532550 TMEM150CB9EJG8 249 aa16.68■□□□□ 0.26
PHRF1-204ENST00000532550 KLK3P07288 261 aaPredicted RBP16.68■□□□□ 0.26
PHRF1-204ENST00000532550 CHRM5P08912 532 aaPredicted RBP16.68■□□□□ 0.26
PHRF1-204ENST00000532550 PAMP19021 973 aa16.68■□□□□ 0.26
PHRF1-204ENST00000532550 RPS3P23396 243 aaKnown RBP eCLIP16.68■□□□□ 0.26
PHRF1-204ENST00000532550 NFATC3Q12968 1075 aa16.68■□□□□ 0.26
PHRF1-204ENST00000532550 DNASE1L3Q13609 305 aa16.68■□□□□ 0.26
PHRF1-204ENST00000532550 ERV3-1Q14264 604 aa16.68■□□□□ 0.26
PHRF1-204ENST00000532550 DEFB109BQ30KR1 87 aa16.68■□□□□ 0.26
PHRF1-204ENST00000532550 FAM199XQ6PEV8 388 aaPredicted RBP16.68■□□□□ 0.26
PHRF1-204ENST00000532550 TTC23LQ6PF05 361 aa16.68■□□□□ 0.26
PHRF1-204ENST00000532550 VRK3Q8IV63 474 aa16.68■□□□□ 0.26
PHRF1-204ENST00000532550 LKAAEAR1Q8TD35 194 aa16.68■□□□□ 0.26
PHRF1-204ENST00000532550 GRK7Q8WTQ7 553 aa16.68■□□□□ 0.26
PHRF1-204ENST00000532550 COG1Q8WTW3 980 aa16.68■□□□□ 0.26
PHRF1-204ENST00000532550 CPT1BQ92523 772 aa16.68■□□□□ 0.26
PHRF1-204ENST00000532550 TCF12Q99081 682 aa16.68■□□□□ 0.26
PHRF1-204ENST00000532550 FAM117AQ9C073 453 aa16.68■□□□□ 0.26
PHRF1-204ENST00000532550 KLHL25Q9H0H3 589 aa16.68■□□□□ 0.26
PHRF1-204ENST00000532550 P2RY12Q9H244 342 aa16.68■□□□□ 0.26
PHRF1-204ENST00000532550 ADNPQ9H2P0 1102 aa16.68■□□□□ 0.26
PHRF1-204ENST00000532550 LATS2Q9NRM7 1088 aa16.68■□□□□ 0.26
PHRF1-204ENST00000532550 PLAGL1Q9UM63 463 aa16.68■□□□□ 0.26
PHRF1-204ENST00000532550 SPTA1P02549 2419 aa16.67■□□□□ 0.26
PHRF1-204ENST00000532550 SDR42E2A6NKP2 422 aa16.67■□□□□ 0.26
PHRF1-204ENST00000532550 ISM1B1AKI9 464 aa16.67■□□□□ 0.26
PHRF1-204ENST00000532550 GOLGA8KD6RF30 607 aa16.67■□□□□ 0.26
PHRF1-204ENST00000532550 GOLGA8TH3BQL2 631 aa16.67■□□□□ 0.26
PHRF1-204ENST00000532550 TERTO14746 1132 aaKnown RBP16.67■□□□□ 0.26
PHRF1-204ENST00000532550 SLCO2B1O94956 709 aa16.67■□□□□ 0.26
PHRF1-204ENST00000532550 TPBGLP0DKB5 382 aa16.67■□□□□ 0.26
PHRF1-204ENST00000532550 MLNP12872 115 aa16.67■□□□□ 0.26
PHRF1-204ENST00000532550 PVRP15151 417 aa16.67■□□□□ 0.26
PHRF1-204ENST00000532550 UGT2B7P16662 529 aa16.67■□□□□ 0.26
PHRF1-204ENST00000532550 OAS2P29728 719 aaKnown RBP16.67■□□□□ 0.26
PHRF1-204ENST00000532550 EIF3BP55884 814 aaKnown RBP16.67■□□□□ 0.26
PHRF1-204ENST00000532550 POLE2P56282 527 aa16.67■□□□□ 0.26
PHRF1-204ENST00000532550 RPS15P62841 145 aaKnown RBP16.67■□□□□ 0.26
PHRF1-204ENST00000532550 ANKRD22Q5VYY1 191 aa16.67■□□□□ 0.26
PHRF1-204ENST00000532550 UNC5DQ6UXZ4 953 aa16.67■□□□□ 0.26
PHRF1-204ENST00000532550 OTOAQ7RTW8 1153 aa16.67■□□□□ 0.26
PHRF1-204ENST00000532550 CAND1Q86VP6 1230 aaKnown RBP16.67■□□□□ 0.26
PHRF1-204ENST00000532550 MCUQ8NE86 351 aa16.67■□□□□ 0.26
PHRF1-204ENST00000532550 CT55Q8WUE5 264 aa16.67■□□□□ 0.26
PHRF1-204ENST00000532550 APOBEC4Q8WW27 367 aaKnown RBP16.67■□□□□ 0.26
PHRF1-204ENST00000532550 N4BP2L2Q92802 583 aaPredicted RBP16.67■□□□□ 0.26
PHRF1-204ENST00000532550 MR1Q95460 341 aa16.67■□□□□ 0.26
PHRF1-204ENST00000532550 CLIP3Q96DZ5 547 aa16.67■□□□□ 0.26
PHRF1-204ENST00000532550 TCTN2Q96GX1 697 aa16.67■□□□□ 0.26
PHRF1-204ENST00000532550 OR2A14Q96R47 310 aa16.67■□□□□ 0.26
PHRF1-204ENST00000532550 GPR87Q9BY21 358 aa16.67■□□□□ 0.26
PHRF1-204ENST00000532550 SLC7A5P2Q9GIP4 190 aa16.67■□□□□ 0.26
PHRF1-204ENST00000532550 KCNF1Q9H3M0 494 aa16.67■□□□□ 0.26
PHRF1-204ENST00000532550 AKIRIN1Q9H9L7 192 aaPredicted RBP16.67■□□□□ 0.26
PHRF1-204ENST00000532550 XAB2Q9HCS7 855 aaKnown RBP16.67■□□□□ 0.26
PHRF1-204ENST00000532550 CDYLQ9Y232 598 aa16.67■□□□□ 0.26
PHRF1-204ENST00000532550 PCDHGA6Q9Y5G7 932 aa16.67■□□□□ 0.26
PHRF1-204ENST00000532550 GOLGA8MH3BSY2 632 aa16.66■□□□□ 0.26
PHRF1-204ENST00000532550 CES2O00748 559 aa16.66■□□□□ 0.26
PHRF1-204ENST00000532550 PHF2O75151 1096 aa16.66■□□□□ 0.26
PHRF1-204ENST00000532550 CREG1O75629 220 aa16.66■□□□□ 0.26
PHRF1-204ENST00000532550 RECKO95980 971 aa16.66■□□□□ 0.26
PHRF1-204ENST00000532550 MSL3P1P0C860 447 aa16.66■□□□□ 0.26
PHRF1-204ENST00000532550 PLA2G2AP14555 144 aa16.66■□□□□ 0.26
PHRF1-204ENST00000532550 ARNTP27540 789 aa16.66■□□□□ 0.26
PHRF1-204ENST00000532550 FMO4P31512 558 aa16.66■□□□□ 0.26
PHRF1-204ENST00000532550 KCNAB2Q13303 367 aa16.66■□□□□ 0.26
PHRF1-204ENST00000532550 KYNUQ16719 465 aa16.66■□□□□ 0.26
PHRF1-204ENST00000532550 RNF187Q5TA31 235 aaPredicted RBP16.66■□□□□ 0.26
PHRF1-204ENST00000532550 ATP1A1-AS1Q5TC04 95 aa16.66■□□□□ 0.26
PHRF1-204ENST00000532550 KIAA0930Q6ICG6 404 aaPredicted RBP16.66■□□□□ 0.26
PHRF1-204ENST00000532550 OR1L3Q8NH93 324 aa16.66■□□□□ 0.26
PHRF1-204ENST00000532550 SKA2Q8WVK7 121 aaPredicted RBP16.66■□□□□ 0.26
PHRF1-204ENST00000532550 TWSG1Q9GZX9 223 aa16.66■□□□□ 0.26
PHRF1-204ENST00000532550 SLC25A18Q9H1K4 315 aa16.66■□□□□ 0.26
PHRF1-204ENST00000532550 STARD5Q9NSY2 213 aa16.66■□□□□ 0.26
PHRF1-204ENST00000532550 SPHK1Q9NYA1 384 aa16.66■□□□□ 0.26
PHRF1-204ENST00000532550 SLC39A10Q9ULF5 831 aa16.66■□□□□ 0.26
PHRF1-204ENST00000532550 SNX12Q9UMY4 172 aa16.66■□□□□ 0.26
PHRF1-204ENST00000532550 HEMK1Q9Y5R4 338 aaPredicted RBP16.66■□□□□ 0.26
PHRF1-204ENST00000532550 TLN1Q9Y490 2541 aaKnown RBP16.65■□□□□ 0.26
PHRF1-204ENST00000532550 A0A0J9YY10 115 aa16.65■□□□□ 0.26
PHRF1-204ENST00000532550 FAM237BA0A1B0GVD1 139 aa16.65■□□□□ 0.26
PHRF1-204ENST00000532550 E7EQ34 232 aa16.65■□□□□ 0.26
PHRF1-204ENST00000532550 H3BMM5 538 aa16.65■□□□□ 0.26
PHRF1-204ENST00000532550 CYP2A7P20853 494 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms