RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 SLC39A13Q96H72 371 aa12.27□□□□□ -0.45
CAPN1-208ENST00000527323 CASD1Q96PB1 797 aa12.27□□□□□ -0.45
CAPN1-208ENST00000527323 ZNF382Q96SR6 550 aa12.27□□□□□ -0.45
CAPN1-208ENST00000527323 PKMYT1Q99640 499 aa12.27□□□□□ -0.45
CAPN1-208ENST00000527323 TMEM106CQ9BVX2 250 aa12.27□□□□□ -0.45
CAPN1-208ENST00000527323 NLE1Q9NVX2 485 aaPredicted RBP12.27□□□□□ -0.45
CAPN1-208ENST00000527323 AASSQ9UDR5 926 aa12.27□□□□□ -0.45
CAPN1-208ENST00000527323 FFAR3O14843 346 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 GPR42O15529 346 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 ANGPTL1O95841 491 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 GUCA1CO95843 209 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 S100BP04271 92 aaPredicted RBP12.26□□□□□ -0.45
CAPN1-208ENST00000527323 MSH3P20585 1137 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 FMO3P31513 532 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 SERPINB10P48595 397 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 ISL1P61371 349 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 VBP1P61758 197 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 EMX1Q04741 257 aaPredicted RBP12.26□□□□□ -0.45
CAPN1-208ENST00000527323 SIM2Q14190 667 aaPredicted RBP12.26□□□□□ -0.45
CAPN1-208ENST00000527323 PTGR1Q14914 329 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 CTF1Q16619 201 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 PARP15Q460N3 678 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 MILR1Q7Z6M3 343 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 PIANPQ8IYJ0 282 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 C7orf61Q8IZ16 206 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 ARL10Q8N8L6 244 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 OR4F6Q8NGB9 312 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 OR8J3Q8NGG0 315 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 BTN2A3PQ96KV6 586 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 NSMCE3Q96MG7 304 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 ACTL8Q9H568 366 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 ZFP14Q9HCL3 533 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 HEBP1Q9NRV9 189 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 NYNRINQ9P2P1 1898 aaKnown RBP12.26□□□□□ -0.45
CAPN1-208ENST00000527323 ERVK-18Q9QC07 812 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 MUC3AQ02505 3323 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 MIA3Q5JRA6 1907 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 FAM92AA1XBS5 289 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 BCKDKO14874 412 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 CYP11A1P05108 521 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 CLTBP09497 229 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 CYP4B1P13584 511 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 ITIH1P19827 911 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 MAP2K4P45985 399 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 PPP2R2BQ00005 443 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 ABRAXAS2Q15018 415 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 TMEM236Q5W0B7 351 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 TMEM53Q6P2H8 277 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 ZNF683Q8IZ20 524 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 PHACTR4Q8IZ21 702 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 CADM3Q8N126 398 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 OR5K1Q8NHB7 308 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 NDNFQ8TB73 568 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 BADQ92934 168 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 TADA1Q96BN2 335 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 DPY30Q9C005 99 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 C11orf49Q9H6J7 331 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 GORASP2Q9H8Y8 452 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 MAGEE1Q9HCI5 957 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 PAK1IP1Q9NWT1 392 aaPredicted RBP12.26□□□□□ -0.45
CAPN1-208ENST00000527323 ZNF229Q9UJW7 825 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 EIF3LQ9Y262 564 aaKnown RBP12.26□□□□□ -0.45
CAPN1-208ENST00000527323 ANGPTL3Q9Y5C1 460 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 BRWD1Q9NSI6 2320 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 ALDH2P05091 517 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 MC4RP32245 332 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 DCTP40126 519 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 CDK5R2Q13319 367 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 BTG3Q14201 252 aaPredicted RBP12.26□□□□□ -0.45
CAPN1-208ENST00000527323 CTXN3Q4LDR2 81 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 FAM26DQ5JW98 314 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 VARS2Q5ST30 1063 aaKnown RBP12.26□□□□□ -0.45
CAPN1-208ENST00000527323 PSAPL1Q6NUJ1 521 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 DET1Q7L5Y6 550 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 TMEM179BQ7Z7N9 219 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 LPCAT1Q8NF37 534 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 FATE1Q969F0 183 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 C1QTNF3Q9BXJ4 246 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 RIBC2Q9H4K1 309 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 FKBPLQ9UIM3 349 aa12.26□□□□□ -0.45
CAPN1-208ENST00000527323 RBMX2Q9Y388 322 aaKnown RBP12.26□□□□□ -0.45
CAPN1-208ENST00000527323 TNRC18O15417 2968 aaPredicted RBP12.25□□□□□ -0.45
CAPN1-208ENST00000527323 IFRD1O00458 451 aaPredicted RBP12.25□□□□□ -0.45
CAPN1-208ENST00000527323 LSM1O15116 133 aaKnown RBP12.25□□□□□ -0.45
CAPN1-208ENST00000527323 AXIN1O15169 862 aa12.25□□□□□ -0.45
CAPN1-208ENST00000527323 AQP9O43315 295 aa12.25□□□□□ -0.45
CAPN1-208ENST00000527323 PRAMEF11O60813 436 aa12.25□□□□□ -0.45
CAPN1-208ENST00000527323 MITFO75030 526 aaPredicted RBP12.25□□□□□ -0.45
CAPN1-208ENST00000527323 GJA8P48165 433 aa12.25□□□□□ -0.45
CAPN1-208ENST00000527323 DUSP4Q13115 394 aa12.25□□□□□ -0.45
CAPN1-208ENST00000527323 GTF2H3Q13889 308 aa12.25□□□□□ -0.45
CAPN1-208ENST00000527323 LAPTM4AQ15012 233 aa12.25□□□□□ -0.45
CAPN1-208ENST00000527323 NPTX1Q15818 432 aa12.25□□□□□ -0.45
CAPN1-208ENST00000527323 LAIR2Q6ISS4 152 aa12.25□□□□□ -0.45
CAPN1-208ENST00000527323 GOLGA7Q7Z5G4 137 aa12.25□□□□□ -0.45
CAPN1-208ENST00000527323 SLC35B4Q969S0 331 aa12.25□□□□□ -0.45
CAPN1-208ENST00000527323 MCOLN1Q9GZU1 580 aa12.25□□□□□ -0.45
CAPN1-208ENST00000527323 IKZF5Q9H5V7 419 aa12.25□□□□□ -0.45
CAPN1-208ENST00000527323 IPPKQ9H8X2 491 aa12.25□□□□□ -0.45
CAPN1-208ENST00000527323 POLE4Q9NR33 117 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms