RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 MYO7BQ6PIF6 2116 aa10.66□□□□□ -0.7
NEDD8-204ENST00000526430 CDC14CA4D256 554 aa10.66□□□□□ -0.7
NEDD8-204ENST00000526430 GOLGA8KD6RF30 607 aa10.66□□□□□ -0.7
NEDD8-204ENST00000526430 GOLGA8TH3BQL2 631 aa10.66□□□□□ -0.7
NEDD8-204ENST00000526430 NUAK1O60285 661 aa10.66□□□□□ -0.7
NEDD8-204ENST00000526430 DPM1O60762 260 aa10.66□□□□□ -0.7
NEDD8-204ENST00000526430 CREG1O75629 220 aa10.66□□□□□ -0.7
NEDD8-204ENST00000526430 SLC25A14O95258 325 aaPredicted RBP10.66□□□□□ -0.7
NEDD8-204ENST00000526430 VAPBO95292 243 aa10.66□□□□□ -0.7
NEDD8-204ENST00000526430 SLU7O95391 586 aaKnown RBP10.66□□□□□ -0.7
NEDD8-204ENST00000526430 PYGLP06737 847 aa10.66□□□□□ -0.7
NEDD8-204ENST00000526430 F7P08709 466 aaPredicted RBP10.66□□□□□ -0.7
NEDD8-204ENST00000526430 FAM153BP0C7A2 387 aa10.66□□□□□ -0.7
NEDD8-204ENST00000526430 ZNF8P17098 575 aaPredicted RBP10.66□□□□□ -0.7
NEDD8-204ENST00000526430 ITGA3P26006 1051 aa10.66□□□□□ -0.7
NEDD8-204ENST00000526430 GABRB3P28472 473 aa10.66□□□□□ -0.7
NEDD8-204ENST00000526430 CTSCP53634 463 aa10.66□□□□□ -0.7
NEDD8-204ENST00000526430 ARL4CP56559 192 aa10.66□□□□□ -0.7
NEDD8-204ENST00000526430 CAV1Q03135 178 aa10.66□□□□□ -0.7
NEDD8-204ENST00000526430 CACNG1Q06432 222 aa10.66□□□□□ -0.7
NEDD8-204ENST00000526430 NR6A1Q15406 480 aa10.66□□□□□ -0.7
NEDD8-204ENST00000526430 DBN1Q16643 649 aa10.66□□□□□ -0.7
NEDD8-204ENST00000526430 FAM153CQ494X1 144 aa10.66□□□□□ -0.7
NEDD8-204ENST00000526430 PYCR3Q53H96 274 aa10.66□□□□□ -0.7
NEDD8-204ENST00000526430 ZNF789Q5FWF6 425 aa10.66□□□□□ -0.7
NEDD8-204ENST00000526430 NKAIN2Q5VXU1 208 aa10.66□□□□□ -0.7
NEDD8-204ENST00000526430 SP5Q6BEB4 398 aaPredicted RBP10.66□□□□□ -0.7
NEDD8-204ENST00000526430 KIAA0930Q6ICG6 404 aaPredicted RBP10.66□□□□□ -0.7
NEDD8-204ENST00000526430 TRMT10BQ6PF06 316 aaKnown RBP10.66□□□□□ -0.7
NEDD8-204ENST00000526430 CENPUQ71F23 418 aa10.66□□□□□ -0.7
NEDD8-204ENST00000526430 GDF7Q7Z4P5 450 aa10.66□□□□□ -0.7
NEDD8-204ENST00000526430 SERPINA9Q86WD7 417 aa10.66□□□□□ -0.7
NEDD8-204ENST00000526430 NRROSQ86YC3 692 aa10.66□□□□□ -0.7
NEDD8-204ENST00000526430 PDIK1LQ8N165 341 aa10.66□□□□□ -0.7
NEDD8-204ENST00000526430 NXPE1Q8N323 547 aa10.66□□□□□ -0.7
NEDD8-204ENST00000526430 FBXO36Q8NEA4 188 aa10.66□□□□□ -0.7
NEDD8-204ENST00000526430 GPR150Q8NGU9 434 aa10.66□□□□□ -0.7
NEDD8-204ENST00000526430 OR4L1Q8NH43 312 aa10.66□□□□□ -0.7
NEDD8-204ENST00000526430 CCL4L1Q8NHW4 92 aa10.66□□□□□ -0.7
NEDD8-204ENST00000526430 ZDHHC1Q8WTX9 485 aa10.66□□□□□ -0.7
NEDD8-204ENST00000526430 PNPLA2Q96AD5 504 aa10.66□□□□□ -0.7
NEDD8-204ENST00000526430 LRRC39Q96DD0 335 aa10.66□□□□□ -0.7
NEDD8-204ENST00000526430 TXLNGYQ9BZA5 131 aa10.66□□□□□ -0.7
NEDD8-204ENST00000526430 TWSG1Q9GZX9 223 aa10.66□□□□□ -0.7
NEDD8-204ENST00000526430 SLAMF7Q9NQ25 335 aa10.66□□□□□ -0.7
NEDD8-204ENST00000526430 SMYD2Q9NRG4 433 aa10.66□□□□□ -0.7
NEDD8-204ENST00000526430 FAM114A2Q9NRY5 505 aa10.66□□□□□ -0.7
NEDD8-204ENST00000526430 CROTQ9UKG9 612 aa10.66□□□□□ -0.7
NEDD8-204ENST00000526430 CHMP2BQ9UQN3 213 aa10.66□□□□□ -0.7
NEDD8-204ENST00000526430 ZNF451Q9Y4E5 1061 aa10.66□□□□□ -0.7
NEDD8-204ENST00000526430 PRSS38A1L453 326 aa10.65□□□□□ -0.7
NEDD8-204ENST00000526430 ANKUB1A6NFN9 424 aa10.65□□□□□ -0.7
NEDD8-204ENST00000526430 CACNB4O00305 520 aaPredicted RBP10.65□□□□□ -0.7
NEDD8-204ENST00000526430 POLR1CO15160 346 aaPredicted RBP10.65□□□□□ -0.7
NEDD8-204ENST00000526430 EIF3HO15372 352 aaKnown RBP eCLIP10.65□□□□□ -0.7
NEDD8-204ENST00000526430 OR1I1O60431 355 aa10.65□□□□□ -0.7
NEDD8-204ENST00000526430 S1PR4O95977 384 aa10.65□□□□□ -0.7
NEDD8-204ENST00000526430 IVLP07476 585 aa10.65□□□□□ -0.7
NEDD8-204ENST00000526430 PGAM1P18669 254 aa10.65□□□□□ -0.7
NEDD8-204ENST00000526430 MPSTP25325 297 aa10.65□□□□□ -0.7
NEDD8-204ENST00000526430 SSTR1P30872 391 aa10.65□□□□□ -0.7
NEDD8-204ENST00000526430 PTGER4P35408 488 aa10.65□□□□□ -0.7
NEDD8-204ENST00000526430 PER3P56645 1201 aa10.65□□□□□ -0.7
NEDD8-204ENST00000526430 TMEM115Q12893 351 aaPredicted RBP10.65□□□□□ -0.7
NEDD8-204ENST00000526430 CALCOCO2Q13137 446 aa10.65□□□□□ -0.7
NEDD8-204ENST00000526430 LAMB3Q13751 1172 aa10.65□□□□□ -0.7
NEDD8-204ENST00000526430 FRG1Q14331 258 aaKnown RBP10.65□□□□□ -0.7
NEDD8-204ENST00000526430 CRYMQ14894 314 aa10.65□□□□□ -0.7
NEDD8-204ENST00000526430 GPR33Q49SQ1 333 aa10.65□□□□□ -0.7
NEDD8-204ENST00000526430 SLC6A19Q695T7 634 aa10.65□□□□□ -0.7
NEDD8-204ENST00000526430 WDR74Q6RFH5 385 aaPredicted RBP10.65□□□□□ -0.7
NEDD8-204ENST00000526430 RELL1Q8IUW5 271 aa10.65□□□□□ -0.7
NEDD8-204ENST00000526430 ZNF669Q96BR6 464 aaPredicted RBP10.65□□□□□ -0.7
NEDD8-204ENST00000526430 MCMBPQ9BTE3 642 aa10.65□□□□□ -0.7
NEDD8-204ENST00000526430 GSDMCQ9BYG8 508 aa10.65□□□□□ -0.7
NEDD8-204ENST00000526430 PHACTR1Q9C0D0 580 aa10.65□□□□□ -0.7
NEDD8-204ENST00000526430 OR2AG1Q9H205 316 aa10.65□□□□□ -0.7
NEDD8-204ENST00000526430 APMAPQ9HDC9 416 aa10.65□□□□□ -0.7
NEDD8-204ENST00000526430 PHPT1Q9NRX4 125 aaPredicted RBP10.65□□□□□ -0.7
NEDD8-204ENST00000526430 TAAR2Q9P1P5 351 aa10.65□□□□□ -0.7
NEDD8-204ENST00000526430 VPS18Q9P253 973 aa10.65□□□□□ -0.7
NEDD8-204ENST00000526430 SLC23A2Q9UGH3 650 aa10.65□□□□□ -0.7
NEDD8-204ENST00000526430 NFU1Q9UMS0 254 aa10.65□□□□□ -0.7
NEDD8-204ENST00000526430 SUFUQ9UMX1 484 aa10.65□□□□□ -0.7
NEDD8-204ENST00000526430 PRKAB1Q9Y478 270 aa10.65□□□□□ -0.7
NEDD8-204ENST00000526430 MAD1L1Q9Y6D9 718 aa10.65□□□□□ -0.7
NEDD8-204ENST00000526430 PIKFYVEQ9Y2I7 2098 aa10.65□□□□□ -0.7
NEDD8-204ENST00000526430 A6NCN8 305 aa10.64□□□□□ -0.71
NEDD8-204ENST00000526430 PPM1DO15297 605 aa10.64□□□□□ -0.71
NEDD8-204ENST00000526430 CD3EAPO15446 510 aaKnown RBP10.64□□□□□ -0.71
NEDD8-204ENST00000526430 CEACAM4O75871 244 aa10.64□□□□□ -0.71
NEDD8-204ENST00000526430 ERVK-10P10266 1014 aa10.64□□□□□ -0.71
NEDD8-204ENST00000526430 ACRV1P26436 265 aa10.64□□□□□ -0.71
NEDD8-204ENST00000526430 MAGEA4P43358 317 aa10.64□□□□□ -0.71
NEDD8-204ENST00000526430 ILF3Q12906 894 aaKnown RBP eCLIP10.64□□□□□ -0.713e-7■■□□□ 13.3
NEDD8-204ENST00000526430 BIRC2Q13490 618 aa10.64□□□□□ -0.71
NEDD8-204ENST00000526430 ITGA9Q13797 1035 aa10.64□□□□□ -0.71
NEDD8-204ENST00000526430 ZRSR2Q15696 482 aaKnown RBP10.64□□□□□ -0.71
NEDD8-204ENST00000526430 ERCC6LQ2NKX8 1250 aa10.64□□□□□ -0.71
NEDD8-204ENST00000526430 TYSND1Q2T9J0 566 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms