RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 GPR18Q14330 331 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 CSHL1Q14406 222 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 TSNQ15631 228 aaKnown RBP6.31□□□□□ -1.4
CD44-214ENST00000525211 C14orf28Q4W4Y0 310 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 TNFAIP8L3Q5GJ75 292 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 PLEKHS1Q5SXH7 462 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 AGAP9Q5VTM2 703 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 IL27RAQ6UWB1 636 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 WASH2PQ6VEQ5 465 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 TIFABQ6ZNK6 161 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 OTOAQ7RTW8 1153 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 CLEC14AQ86T13 490 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 PDZD3Q86UT5 571 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 GKN2Q86XP6 184 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 TDRPQ86YL5 185 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 C4orf33Q8N1A6 199 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 FSTL5Q8N475 847 aaPredicted RBP6.31□□□□□ -1.4
CD44-214ENST00000525211 LINC01555Q8NAE3 123 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 PPFIBP2Q8ND30 876 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 RHBDD1Q8TEB9 315 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 SETD7Q8WTS6 366 aaKnown RBP6.31□□□□□ -1.4
CD44-214ENST00000525211 SCG3Q8WXD2 468 aaKnown RBP6.31□□□□□ -1.4
CD44-214ENST00000525211 ASB11Q8WXH4 323 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 TFGQ92734 400 aaPredicted RBP6.31□□□□□ -1.4
CD44-214ENST00000525211 ESAMQ96AP7 390 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 CCDC74AQ96AQ1 378 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 SKA1Q96BD8 255 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 RNF31Q96EP0 1072 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 PRR11Q96HE9 360 aaPredicted RBP6.31□□□□□ -1.4
CD44-214ENST00000525211 ZNF514Q96K75 400 aaPredicted RBP6.31□□□□□ -1.4
CD44-214ENST00000525211 CNDP2Q96KP4 475 aaKnown RBP6.31□□□□□ -1.4
CD44-214ENST00000525211 UBXN10Q96LJ8 280 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 FERD3LQ96RJ6 166 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 PKP4Q99569 1192 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 TTC1Q99614 292 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 TMEM109Q9BVC6 243 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 VPS11Q9H270 941 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 ZFAND3Q9H8U3 227 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 SLC40A1Q9NP59 571 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 WASH6PQ9NQA3 447 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 PCMTD2Q9NV79 361 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 SPHK1Q9NYA1 384 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 TAS2R13Q9NYV9 303 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 NLGN3Q9NZ94 848 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 CPNE7Q9UBL6 633 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 LGALS13Q9UHV8 139 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 TRMT6Q9UJA5 497 aaKnown RBP6.31□□□□□ -1.4
CD44-214ENST00000525211 EMCNQ9ULC0 261 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 ATXN7L1Q9ULK2 861 aaPredicted RBP6.31□□□□□ -1.4
CD44-214ENST00000525211 PADI4Q9UM07 663 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 ICKQ9UPZ9 632 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 SH2B3Q9UQQ2 575 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 PDE10AQ9Y233 779 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 PCDHGB2Q9Y5G2 931 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 PKD1L2Q7Z442 2459 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 A0A096LPK6 155 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 A0A1W2PNU3 283 aaPredicted RBP6.3□□□□□ -1.4
CD44-214ENST00000525211 A0A1W2PPV9 198 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 DCDC2BA2VCK2 349 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 GFYI3L273 518 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 BTN3A3O00478 584 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 BTN3A1O00481 513 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 MAP2K7O14733 419 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 RASGRF2O14827 1237 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 LIN7AO14910 233 aaPredicted RBP6.3□□□□□ -1.4
CD44-214ENST00000525211 TAPBPO15533 448 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 PRAMEF4O60810 478 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 SPAG7O75391 227 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 VPS26AO75436 327 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 PSIP1O75475 530 aaKnown RBP6.3□□□□□ -1.4
CD44-214ENST00000525211 LDOC1O95751 146 aaPredicted RBP6.3□□□□□ -1.4
CD44-214ENST00000525211 IL2RAP01589 272 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 APOA4P06727 396 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 SNRPAP09012 282 aaKnown RBP6.3□□□□□ -1.4
CD44-214ENST00000525211 SLC35G4P0C7Q5 338 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 MPC1LP0DKB6 136 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 MTHFD2P13995 350 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 TYRP1P17643 537 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 XRCC1P18887 633 aaPredicted RBP6.3□□□□□ -1.4
CD44-214ENST00000525211 CD9P21926 228 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 MPSTP25325 297 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 PSMB5P28074 263 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 CD1CP29017 333 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 PPARGP37231 505 aaPredicted RBP6.3□□□□□ -1.4
CD44-214ENST00000525211 CCNFP41002 786 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 GLRBP48167 497 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 ACADVLP49748 655 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 AGTR2P50052 363 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 WDR4P57081 412 aaKnown RBP6.3□□□□□ -1.4
CD44-214ENST00000525211 SNRPNP63162 240 aaKnown RBP6.3□□□□□ -1.4
CD44-214ENST00000525211 RPA4Q13156 261 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 PPP1R3AQ16821 1122 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 RSPO4Q2I0M5 234 aaPredicted RBP6.3□□□□□ -1.4
CD44-214ENST00000525211 KRT71Q3SY84 523 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 SYTL3Q4VX76 610 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 CCDC157Q569K6 752 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 TTMPQ5BVD1 217 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 CEP85LQ5SZL2 805 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 PRAMEF9Q5VWM5 478 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 CES4AQ5XG92 561 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms