RNA–Protein interactions for RNA: ENST00000522702.5

FAM49B-222, Transcript of family with sequence similarity 49 member B, human

TSL 4

Gene FAM49B, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM49B-222	ENST00000522702	UCP2	P55851	309 aa		3.87	□□□□□ -1.79
FAM49B-222	ENST00000522702	MAD2L1	Q13257	205 aa	Predicted RBP	3.87	□□□□□ -1.79
FAM49B-222	ENST00000522702	NEDD9	Q14511	834 aa		3.87	□□□□□ -1.79
FAM49B-222	ENST00000522702	KARS	Q15046	597 aa	Known RBP	3.87	□□□□□ -1.79
FAM49B-222	ENST00000522702	UGP2	Q16851	508 aa		3.87	□□□□□ -1.79
FAM49B-222	ENST00000522702	EIF2S3L	Q2VIR3	472 aa	Known RBP	3.87	□□□□□ -1.79
FAM49B-222	ENST00000522702	CCDC40	Q4G0X9	1142 aa		3.87	□□□□□ -1.79
FAM49B-222	ENST00000522702	TAF1B	Q53T94	588 aa	Predicted RBP	3.87	□□□□□ -1.79
FAM49B-222	ENST00000522702	ASPHD1	Q5U4P2	390 aa		3.87	□□□□□ -1.79
FAM49B-222	ENST00000522702	ZDHHC20	Q5W0Z9	365 aa		3.87	□□□□□ -1.79
FAM49B-222	ENST00000522702	NSUN5P2	Q63ZY6	315 aa		3.87	□□□□□ -1.79
FAM49B-222	ENST00000522702	NCAPH2	Q6IBW4	605 aa		3.87	□□□□□ -1.79
FAM49B-222	ENST00000522702	PODNL1	Q6PEZ8	512 aa		3.87	□□□□□ -1.79
FAM49B-222	ENST00000522702	NHLRC1	Q6VVB1	395 aa		3.87	□□□□□ -1.79
FAM49B-222	ENST00000522702	FAM57B	Q71RH2	274 aa		3.87	□□□□□ -1.79
FAM49B-222	ENST00000522702	ARMC9	Q7Z3E5	817 aa		3.87	□□□□□ -1.79
FAM49B-222	ENST00000522702	IRF2BP2	Q7Z5L9	587 aa		3.87	□□□□□ -1.79
FAM49B-222	ENST00000522702	BATF2	Q8N1L9	274 aa		3.87	□□□□□ -1.79
FAM49B-222	ENST00000522702	SPATA6L	Q8N4H0	392 aa		3.87	□□□□□ -1.79
FAM49B-222	ENST00000522702	SLC25A41	Q8N5S1	370 aa		3.87	□□□□□ -1.79
FAM49B-222	ENST00000522702	ANKRD13C	Q8N6S4	541 aa		3.87	□□□□□ -1.79
FAM49B-222	ENST00000522702	SMRP1	Q8NCR6	262 aa		3.87	□□□□□ -1.79
FAM49B-222	ENST00000522702	CCNY	Q8ND76	341 aa		3.87	□□□□□ -1.79
FAM49B-222	ENST00000522702	DENND6B	Q8NEG7	585 aa		3.87	□□□□□ -1.79
FAM49B-222	ENST00000522702	OR52E1	Q8NGJ3	308 aa		3.87	□□□□□ -1.79
FAM49B-222	ENST00000522702	RNASE8	Q8TDE3	154 aa	Known RBP	3.87	□□□□□ -1.79
FAM49B-222	ENST00000522702	SHC3	Q92529	594 aa		3.87	□□□□□ -1.79
FAM49B-222	ENST00000522702	RAD54L	Q92698	747 aa		3.87	□□□□□ -1.79
FAM49B-222	ENST00000522702	SNAPC3	Q92966	411 aa		3.87	□□□□□ -1.79
FAM49B-222	ENST00000522702	LRRC3B	Q96PB8	259 aa		3.87	□□□□□ -1.79
FAM49B-222	ENST00000522702	TXN2	Q99757	166 aa		3.87	□□□□□ -1.79
FAM49B-222	ENST00000522702	CPNE1	Q99829	537 aa		3.87	□□□□□ -1.79
FAM49B-222	ENST00000522702	PKP2	Q99959	881 aa		3.87	□□□□□ -1.79
FAM49B-222	ENST00000522702	WDR83	Q9BRX9	315 aa	Known RBP	3.87	□□□□□ -1.79
FAM49B-222	ENST00000522702	NPFFR1	Q9GZQ6	430 aa		3.87	□□□□□ -1.79
FAM49B-222	ENST00000522702	WNT5B	Q9H1J7	359 aa		3.87	□□□□□ -1.79
FAM49B-222	ENST00000522702	SPAG4	Q9NPE6	437 aa		3.87	□□□□□ -1.79
FAM49B-222	ENST00000522702	KLHL13	Q9P2N7	655 aa		3.87	□□□□□ -1.79
FAM49B-222	ENST00000522702	RABL2A	Q9UBK7	228 aa	Predicted RBP	3.87	□□□□□ -1.79
FAM49B-222	ENST00000522702	TRMT6	Q9UJA5	497 aa	Known RBP	3.87	□□□□□ -1.79
FAM49B-222	ENST00000522702	UTS2R	Q9UKP6	389 aa		3.87	□□□□□ -1.79
FAM49B-222	ENST00000522702	HPCAL4	Q9UM19	191 aa		3.87	□□□□□ -1.79
FAM49B-222	ENST00000522702	LAMP3	Q9UQV4	416 aa		3.87	□□□□□ -1.79
FAM49B-222	ENST00000522702	KCNK6	Q9Y257	313 aa		3.87	□□□□□ -1.79
FAM49B-222	ENST00000522702	STON1	Q9Y6Q2	735 aa		3.87	□□□□□ -1.79
FAM49B-222	ENST00000522702	NPHP3	Q7Z494	1330 aa		3.87	□□□□□ -1.79
FAM49B-222	ENST00000522702	HECW1	Q76N89	1606 aa		3.87	□□□□□ -1.79
FAM49B-222	ENST00000522702	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	3.87	□□□□□ -1.79	3e-6	■■□□□ 12.9
FAM49B-222	ENST00000522702	EPRS	P07814	1512 aa	Known RBP	3.86	□□□□□ -1.79
FAM49B-222	ENST00000522702	EHBP1L1	Q8N3D4	1523 aa		3.86	□□□□□ -1.79
FAM49B-222	ENST00000522702	TRBV5-3	A0A0A0MS03	114 aa		3.86	□□□□□ -1.79
FAM49B-222	ENST00000522702		A0A0G2JK05	382 aa		3.86	□□□□□ -1.79
FAM49B-222	ENST00000522702		A0A1W2PPW3	197 aa		3.86	□□□□□ -1.79
FAM49B-222	ENST00000522702	ELOVL7	A1L3X0	281 aa		3.86	□□□□□ -1.79
FAM49B-222	ENST00000522702	ANKUB1	A6NFN9	424 aa		3.86	□□□□□ -1.79
FAM49B-222	ENST00000522702	SDR42E2	A6NKP2	422 aa		3.86	□□□□□ -1.79
FAM49B-222	ENST00000522702	KBTBD13	C9JR72	458 aa		3.86	□□□□□ -1.79
FAM49B-222	ENST00000522702		H0YCG3	227 aa		3.86	□□□□□ -1.79
FAM49B-222	ENST00000522702	TMEM189-UBE2V1	I3L0A0	370 aa		3.86	□□□□□ -1.79
FAM49B-222	ENST00000522702	HSPB6	O14558	160 aa		3.86	□□□□□ -1.79
FAM49B-222	ENST00000522702	XRCC3	O43542	346 aa		3.86	□□□□□ -1.79
FAM49B-222	ENST00000522702	SSX4	O60224	188 aa		3.86	□□□□□ -1.79
FAM49B-222	ENST00000522702	NDUFB4	O95168	129 aa		3.86	□□□□□ -1.79
FAM49B-222	ENST00000522702	SNX4	O95219	450 aa		3.86	□□□□□ -1.79
FAM49B-222	ENST00000522702	PTBP3	O95758	552 aa	Known RBP	3.86	□□□□□ -1.79
FAM49B-222	ENST00000522702	PDGFB	P01127	241 aa	Predicted RBP	3.86	□□□□□ -1.79
FAM49B-222	ENST00000522702	PLA2G4B	P0C869	781 aa		3.86	□□□□□ -1.79
FAM49B-222	ENST00000522702	SPP1	P10451	314 aa		3.86	□□□□□ -1.79
FAM49B-222	ENST00000522702	PRG2	P13727	222 aa		3.86	□□□□□ -1.79
FAM49B-222	ENST00000522702	DDX5	P17844	614 aa	Known RBP	3.86	□□□□□ -1.79
FAM49B-222	ENST00000522702	CD22	P20273	847 aa		3.86	□□□□□ -1.79
FAM49B-222	ENST00000522702	PSMB4	P28070	264 aa		3.86	□□□□□ -1.79
FAM49B-222	ENST00000522702	METAP2	P50579	478 aa	Known RBP eCLIP	3.86	□□□□□ -1.79
FAM49B-222	ENST00000522702	SMS	P52788	366 aa		3.86	□□□□□ -1.79
FAM49B-222	ENST00000522702	ARFIP1	P53367	373 aa		3.86	□□□□□ -1.79
FAM49B-222	ENST00000522702	CDK3	Q00526	305 aa		3.86	□□□□□ -1.79
FAM49B-222	ENST00000522702	FAM27E3	Q08E93	113 aa		3.86	□□□□□ -1.79
FAM49B-222	ENST00000522702	UBE2V1	Q13404	147 aa		3.86	□□□□□ -1.79
FAM49B-222	ENST00000522702	TNK1	Q13470	666 aa		3.86	□□□□□ -1.79
FAM49B-222	ENST00000522702	MELK	Q14680	651 aa		3.86	□□□□□ -1.79
FAM49B-222	ENST00000522702	OASL	Q15646	514 aa	Known RBP	3.86	□□□□□ -1.79
FAM49B-222	ENST00000522702	FASTKD1	Q53R41	847 aa	Known RBP	3.86	□□□□□ -1.79
FAM49B-222	ENST00000522702	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	3.86	□□□□□ -1.79	4e-6	■■■■■ 32.2
FAM49B-222	ENST00000522702	LCE1E	Q5T753	118 aa		3.86	□□□□□ -1.79
FAM49B-222	ENST00000522702	SLC25A24	Q6NUK1	477 aa		3.86	□□□□□ -1.79
FAM49B-222	ENST00000522702	METTL2B	Q6P1Q9	378 aa	Known RBP	3.86	□□□□□ -1.79
FAM49B-222	ENST00000522702	DEF8	Q6ZN54	512 aa		3.86	□□□□□ -1.79
FAM49B-222	ENST00000522702	MTSS1L	Q765P7	747 aa		3.86	□□□□□ -1.79
FAM49B-222	ENST00000522702	PHLDB2	Q86SQ0	1253 aa		3.86	□□□□□ -1.79
FAM49B-222	ENST00000522702	AQP12A	Q8IXF9	295 aa		3.86	□□□□□ -1.79
FAM49B-222	ENST00000522702	DDIAS	Q8IXT1	998 aa		3.86	□□□□□ -1.79
FAM49B-222	ENST00000522702	MB21D2	Q8IYB1	491 aa	Predicted RBP	3.86	□□□□□ -1.79
FAM49B-222	ENST00000522702	CFAP206	Q8IYR0	622 aa		3.86	□□□□□ -1.79
FAM49B-222	ENST00000522702	ELMOD2	Q8IZ81	293 aa		3.86	□□□□□ -1.79
FAM49B-222	ENST00000522702	DSEL	Q8IZU8	1212 aa		3.86	□□□□□ -1.79
FAM49B-222	ENST00000522702	RASGEF1C	Q8N431	466 aa		3.86	□□□□□ -1.79
FAM49B-222	ENST00000522702	GMCL1P1	Q8NEA9	526 aa		3.86	□□□□□ -1.79
FAM49B-222	ENST00000522702	AGBL3	Q8NEM8	1001 aa		3.86	□□□□□ -1.79
FAM49B-222	ENST00000522702	OR2AJ1	Q8NGZ0	328 aa		3.86	□□□□□ -1.79
FAM49B-222	ENST00000522702	EXOC6	Q8TAG9	804 aa		3.86	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms