RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 ATXN10Q9UBB4 475 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 ANAPC7Q9UJX3 599 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 TCRBV5S1A1TA0A578 114 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 GSAPA4D1B5 854 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 TMEM191CA6NGB0 347 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 FADS2P1A8MWK0 482 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 TCP11X1B4DZS4 312 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 F5H423 210 aaPredicted RBP6.08□□□□□ -1.44
PABPC1-220ENST00000522658 MATN3O15232 486 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 KIF1CO43896 1103 aaKnown RBP6.08□□□□□ -1.44
PABPC1-220ENST00000522658 MTX2O75431 263 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 ZBTB11O95625 1053 aaPredicted RBP6.08□□□□□ -1.44
PABPC1-220ENST00000522658 JCHAINP01591 159 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 FTLP02792 175 aaPredicted RBP6.08□□□□□ -1.44
PABPC1-220ENST00000522658 SLC35G4P0C7Q5 338 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 EBLN1P0CF75 366 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 CDH3P22223 829 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 OTX2P32243 289 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 CD86P42081 329 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 GLRBP48167 497 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 DRG2P55039 364 aaKnown RBP6.08□□□□□ -1.44
PABPC1-220ENST00000522658 RIPPLY3P57055 190 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 PCBP3P57721 371 aaKnown RBP6.08□□□□□ -1.44
PABPC1-220ENST00000522658 DCDC1P59894 354 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 KRTAP10-2P60368 255 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 ERVFRD-1P60508 538 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 RNF4P78317 190 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 ADCY2Q08462 1091 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 PWP1Q13610 501 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 IL10RAQ13651 578 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 GALNT3Q14435 633 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 KCNAB1Q14722 419 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 PTPRRQ15256 657 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 PPP2R5EQ16537 467 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 CYP2A13Q16696 494 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 PRR30Q53SZ7 412 aaPredicted RBP6.08□□□□□ -1.44
PABPC1-220ENST00000522658 ZDHHC20Q5W0Z9 365 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 PWWP2BQ6NUJ5 590 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 DPY19L2P1Q6NXN4 242 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 ZNF449Q6P9G9 518 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 FAM199XQ6PEV8 388 aaPredicted RBP6.08□□□□□ -1.44
PABPC1-220ENST00000522658 GPR135Q8IZ08 494 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 ZADH2Q8N4Q0 377 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 TRAM1L1Q8N609 369 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 ENDOVQ8N8Q3 282 aaKnown RBP6.08□□□□□ -1.44
PABPC1-220ENST00000522658 KCTD6Q8NC69 237 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 BRSK1Q8TDC3 778 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 KLHL6Q8WZ60 621 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 FER1L6-AS2Q96M78 137 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 IP6K3Q96PC2 410 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 LYSMD1Q96S90 227 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 SRPK1Q96SB4 655 aaKnown RBP6.08□□□□□ -1.44
PABPC1-220ENST00000522658 NUP85Q9BW27 656 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.08□□□□□ -1.44
PABPC1-220ENST00000522658 PCDH18Q9HCL0 1135 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 KCND1Q9NSA2 647 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 ETNK2Q9NVF9 386 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 SIRT5Q9NXA8 310 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 TAS2R14Q9NYV8 317 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 EPHA6Q9UF33 1036 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 NDOR1Q9UHB4 597 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 IP6K2Q9UHH9 426 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 MYO6Q9UM54 1294 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 SHOC2Q9UQ13 582 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 SLC30A1Q9Y6M5 507 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 RELNP78509 3460 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 LRRK2Q5S007 2527 aa6.08□□□□□ -1.44
PABPC1-220ENST00000522658 ZNF106Q9H2Y7 1883 aaKnown RBP6.08□□□□□ -1.44
PABPC1-220ENST00000522658 IGHV5-51A0A0C4DH38 117 aa6.07□□□□□ -1.44
PABPC1-220ENST00000522658 ARHGAP10A1A4S6 786 aa6.07□□□□□ -1.44
PABPC1-220ENST00000522658 OR5K3A6NET4 321 aa6.07□□□□□ -1.44
PABPC1-220ENST00000522658 GOLGA6L3A6NEY3 463 aa6.07□□□□□ -1.44
PABPC1-220ENST00000522658 LRRC53A6NM62 1247 aa6.07□□□□□ -1.44
PABPC1-220ENST00000522658 ANKRD66B4E2M5 251 aa6.07□□□□□ -1.44
PABPC1-220ENST00000522658 TMEM150CB9EJG8 249 aa6.07□□□□□ -1.44
PABPC1-220ENST00000522658 MYO1FO00160 1098 aa6.07□□□□□ -1.44
PABPC1-220ENST00000522658 MATN2O00339 956 aa6.07□□□□□ -1.44
PABPC1-220ENST00000522658 PPP1R12AO14974 1030 aaPredicted RBP6.07□□□□□ -1.44
PABPC1-220ENST00000522658 HNRNPRO43390 633 aaKnown RBP6.07□□□□□ -1.44
PABPC1-220ENST00000522658 KCNJ13O60928 360 aa6.07□□□□□ -1.44
PABPC1-220ENST00000522658 ATE1O95260 518 aa6.07□□□□□ -1.44
PABPC1-220ENST00000522658 HLA-DQB2P05538 268 aa6.07□□□□□ -1.44
PABPC1-220ENST00000522658 HBQ1P09105 142 aa6.07□□□□□ -1.44
PABPC1-220ENST00000522658 RAB40ALP0C0E4 278 aa6.07□□□□□ -1.44
PABPC1-220ENST00000522658 GZMAP12544 262 aa6.07□□□□□ -1.44
PABPC1-220ENST00000522658 FOLR1P15328 257 aa6.07□□□□□ -1.44
PABPC1-220ENST00000522658 HLA-DPA1P20036 260 aa6.07□□□□□ -1.44
PABPC1-220ENST00000522658 MSH3P20585 1137 aa6.07□□□□□ -1.44
PABPC1-220ENST00000522658 LPOP22079 712 aaPredicted RBP6.07□□□□□ -1.44
PABPC1-220ENST00000522658 CCNCP24863 283 aa6.07□□□□□ -1.44
PABPC1-220ENST00000522658 NDUFS1P28331 727 aa6.07□□□□□ -1.44
PABPC1-220ENST00000522658 GALNT2Q10471 571 aa6.07□□□□□ -1.44
PABPC1-220ENST00000522658 AP1B1Q10567 949 aa6.07□□□□□ -1.44
PABPC1-220ENST00000522658 ITGA9Q13797 1035 aa6.07□□□□□ -1.44
PABPC1-220ENST00000522658 SLC14A2Q15849 920 aa6.07□□□□□ -1.44
PABPC1-220ENST00000522658 STX1AQ16623 288 aa6.07□□□□□ -1.44
PABPC1-220ENST00000522658 LONRF2Q1L5Z9 754 aa6.07□□□□□ -1.44
PABPC1-220ENST00000522658 CCDC183Q5T5S1 534 aa6.07□□□□□ -1.44
PABPC1-220ENST00000522658 AGAP9Q5VTM2 703 aa6.07□□□□□ -1.44
PABPC1-220ENST00000522658 IZUMO3Q5VZ72 239 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms