RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 FANCEQ9HB96 536 aa16.51■□□□□ 0.23
SQLE-205ENST00000521232 TUBD1Q9UJT1 453 aa16.51■□□□□ 0.23
SQLE-205ENST00000521232 TDRKHQ9Y2W6 561 aaKnown RBP16.51■□□□□ 0.23
SQLE-205ENST00000521232 ZSCAN12O43309 604 aa16.5■□□□□ 0.23
SQLE-205ENST00000521232 MAP3K7O43318 606 aa16.5■□□□□ 0.23
SQLE-205ENST00000521232 KDM1AO60341 852 aa16.5■□□□□ 0.23
SQLE-205ENST00000521232 CPNE3O75131 537 aaKnown RBP16.5■□□□□ 0.23
SQLE-205ENST00000521232 KATNA1O75449 491 aa16.5■□□□□ 0.23
SQLE-205ENST00000521232 NDUFS3O75489 264 aa16.5■□□□□ 0.23
SQLE-205ENST00000521232 SNRNP200O75643 2136 aaKnown RBP16.5■□□□□ 0.23
SQLE-205ENST00000521232 VAPBO95292 243 aa16.5■□□□□ 0.23
SQLE-205ENST00000521232 APOA4P06727 396 aa16.5■□□□□ 0.23
SQLE-205ENST00000521232 RPS3P23396 243 aaKnown RBP eCLIP16.5■□□□□ 0.233e-8■■■□□ 14.9
SQLE-205ENST00000521232 VPS41P49754 854 aa16.5■□□□□ 0.23
SQLE-205ENST00000521232 CSE1LP55060 971 aaKnown RBP16.5■□□□□ 0.23
SQLE-205ENST00000521232 NFATC3Q12968 1075 aa16.5■□□□□ 0.23
SQLE-205ENST00000521232 DEFB109BQ30KR1 87 aa16.5■□□□□ 0.23
SQLE-205ENST00000521232 ZNF789Q5FWF6 425 aa16.5■□□□□ 0.23
SQLE-205ENST00000521232 PTRHD1Q6GMV3 140 aaKnown RBP16.5■□□□□ 0.23
SQLE-205ENST00000521232 FAM199XQ6PEV8 388 aaPredicted RBP16.5■□□□□ 0.23
SQLE-205ENST00000521232 CES3Q6UWW8 571 aa16.5■□□□□ 0.23
SQLE-205ENST00000521232 CAND1Q86VP6 1230 aaKnown RBP16.5■□□□□ 0.23
SQLE-205ENST00000521232 LRRC6Q86X45 466 aa16.5■□□□□ 0.23
SQLE-205ENST00000521232 TMEM126BQ8IUX1 230 aa16.5■□□□□ 0.23
SQLE-205ENST00000521232 KRT222Q8N1A0 295 aa16.5■□□□□ 0.23
SQLE-205ENST00000521232 SLC35F6Q8N357 371 aa16.5■□□□□ 0.23
SQLE-205ENST00000521232 SLC38A9Q8NBW4 561 aa16.5■□□□□ 0.23
SQLE-205ENST00000521232 FLVCR1-AS1Q8TAF5 88 aa16.5■□□□□ 0.23
SQLE-205ENST00000521232 GPR87Q9BY21 358 aa16.5■□□□□ 0.23
SQLE-205ENST00000521232 CHRNA10Q9GZZ6 450 aa16.5■□□□□ 0.23
SQLE-205ENST00000521232 SLC25A18Q9H1K4 315 aa16.5■□□□□ 0.23
SQLE-205ENST00000521232 GNPTGQ9UJJ9 305 aa16.5■□□□□ 0.23
SQLE-205ENST00000521232 NEU2Q9Y3R4 380 aa16.5■□□□□ 0.23
SQLE-205ENST00000521232 TENM4Q6N022 2769 aa16.49■□□□□ 0.23
SQLE-205ENST00000521232 AVILO75366 819 aa16.49■□□□□ 0.23
SQLE-205ENST00000521232 CREG1O75629 220 aa16.49■□□□□ 0.23
SQLE-205ENST00000521232 CHRM5P08912 532 aaPredicted RBP16.49■□□□□ 0.23
SQLE-205ENST00000521232 MLNP12872 115 aa16.49■□□□□ 0.23
SQLE-205ENST00000521232 PVRP15151 417 aa16.49■□□□□ 0.23
SQLE-205ENST00000521232 UGT2B7P16662 529 aa16.49■□□□□ 0.23
SQLE-205ENST00000521232 ABRQ12979 859 aa16.49■□□□□ 0.23
SQLE-205ENST00000521232 KCNAB2Q13303 367 aa16.49■□□□□ 0.23
SQLE-205ENST00000521232 ERV3-1Q14264 604 aa16.49■□□□□ 0.23
SQLE-205ENST00000521232 ATP1A1-AS1Q5TC04 95 aa16.49■□□□□ 0.23
SQLE-205ENST00000521232 ANKRD22Q5VYY1 191 aa16.49■□□□□ 0.23
SQLE-205ENST00000521232 MRNIPQ6NTE8 343 aa16.49■□□□□ 0.23
SQLE-205ENST00000521232 CCDC137Q6PK04 289 aaKnown RBP16.49■□□□□ 0.23
SQLE-205ENST00000521232 SDCCAG8Q86SQ7 713 aaPredicted RBP16.49■□□□□ 0.23
SQLE-205ENST00000521232 MCUQ8NE86 351 aa16.49■□□□□ 0.23
SQLE-205ENST00000521232 OR1L3Q8NH93 324 aa16.49■□□□□ 0.23
SQLE-205ENST00000521232 ACTRT1Q8TDG2 376 aa16.49■□□□□ 0.23
SQLE-205ENST00000521232 APOBEC4Q8WW27 367 aaKnown RBP16.49■□□□□ 0.23
SQLE-205ENST00000521232 CPT1BQ92523 772 aa16.49■□□□□ 0.23
SQLE-205ENST00000521232 PANX3Q96QZ0 392 aa16.49■□□□□ 0.23
SQLE-205ENST00000521232 OSBPL9Q96SU4 736 aa16.49■□□□□ 0.23
SQLE-205ENST00000521232 TCF12Q99081 682 aa16.49■□□□□ 0.23
SQLE-205ENST00000521232 FAM117AQ9C073 453 aa16.49■□□□□ 0.23
SQLE-205ENST00000521232 SPHK1Q9NYA1 384 aa16.49■□□□□ 0.23
SQLE-205ENST00000521232 SERTAD3Q9UJW9 196 aa16.49■□□□□ 0.23
SQLE-205ENST00000521232 MAGEB16A2A368 324 aa16.48■□□□□ 0.23
SQLE-205ENST00000521232 TMEM150CB9EJG8 249 aa16.48■□□□□ 0.23
SQLE-205ENST00000521232 PGRMC1O00264 195 aaKnown RBP16.48■□□□□ 0.23
SQLE-205ENST00000521232 CES2O00748 559 aa16.48■□□□□ 0.23
SQLE-205ENST00000521232 KPNA5O15131 536 aa16.48■□□□□ 0.23
SQLE-205ENST00000521232 RPN2P04844 631 aa16.48■□□□□ 0.23
SQLE-205ENST00000521232 KLK3P07288 261 aaPredicted RBP16.48■□□□□ 0.23
SQLE-205ENST00000521232 FURINP09958 794 aa16.48■□□□□ 0.23
SQLE-205ENST00000521232 TERF1P54274 439 aa16.48■□□□□ 0.23
SQLE-205ENST00000521232 GPS2Q13227 327 aa16.48■□□□□ 0.23
SQLE-205ENST00000521232 KIR2DS3Q14952 304 aa16.48■□□□□ 0.23
SQLE-205ENST00000521232 KYNUQ16719 465 aa16.48■□□□□ 0.23
SQLE-205ENST00000521232 TYSND1Q2T9J0 566 aa16.48■□□□□ 0.23
SQLE-205ENST00000521232 PLEKHS1Q5SXH7 462 aa16.48■□□□□ 0.23
SQLE-205ENST00000521232 PRAMEF17Q5VTA0 474 aa16.48■□□□□ 0.23
SQLE-205ENST00000521232 KIAA0930Q6ICG6 404 aaPredicted RBP16.48■□□□□ 0.23
SQLE-205ENST00000521232 UNC5DQ6UXZ4 953 aa16.48■□□□□ 0.23
SQLE-205ENST00000521232 CDHR3Q6ZTQ4 885 aa16.48■□□□□ 0.23
SQLE-205ENST00000521232 HOOK3Q86VS8 718 aa16.48■□□□□ 0.23
SQLE-205ENST00000521232 COG1Q8WTW3 980 aa16.48■□□□□ 0.23
SQLE-205ENST00000521232 TCTN2Q96GX1 697 aa16.48■□□□□ 0.23
SQLE-205ENST00000521232 BIRC8Q96P09 236 aa16.48■□□□□ 0.23
SQLE-205ENST00000521232 MENTQ9BUN1 341 aa16.48■□□□□ 0.23
SQLE-205ENST00000521232 KLHL25Q9H0H3 589 aa16.48■□□□□ 0.23
SQLE-205ENST00000521232 KCNF1Q9H3M0 494 aa16.48■□□□□ 0.23
SQLE-205ENST00000521232 FAM60AQ9NP50 221 aa16.48■□□□□ 0.23
SQLE-205ENST00000521232 PLAGL1Q9UM63 463 aa16.48■□□□□ 0.23
SQLE-205ENST00000521232 SDR42E2A6NKP2 422 aa16.47■□□□□ 0.23
SQLE-205ENST00000521232 GOLGA8KD6RF30 607 aa16.47■□□□□ 0.23
SQLE-205ENST00000521232 GOLGA8TH3BQL2 631 aa16.47■□□□□ 0.23
SQLE-205ENST00000521232 MEN1O00255 615 aa16.47■□□□□ 0.23
SQLE-205ENST00000521232 TMEM63AO94886 807 aa16.47■□□□□ 0.23
SQLE-205ENST00000521232 PTPN4P29074 926 aa16.47■□□□□ 0.23
SQLE-205ENST00000521232 RORAP35398 523 aa16.47■□□□□ 0.23
SQLE-205ENST00000521232 RAB28P51157 221 aa16.47■□□□□ 0.23
SQLE-205ENST00000521232 ADARP55265 1226 aaKnown RBP16.47■□□□□ 0.23
SQLE-205ENST00000521232 RPS15P62841 145 aaKnown RBP16.47■□□□□ 0.23
SQLE-205ENST00000521232 GRB7Q14451 532 aa16.47■□□□□ 0.23
SQLE-205ENST00000521232 TMED2Q15363 201 aa16.47■□□□□ 0.23
SQLE-205ENST00000521232 SLC5A12Q1EHB4 618 aa16.47■□□□□ 0.23
SQLE-205ENST00000521232 CTSL3PQ5NE16 218 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms