RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 ATP13A2Q9NQ11 1180 aa5.9□□□□□ -1.46
LSM3P4-201ENST00000502948 SPTLC3Q9NUV7 552 aa5.9□□□□□ -1.46
LSM3P4-201ENST00000502948 NLE1Q9NVX2 485 aaPredicted RBP5.9□□□□□ -1.46
LSM3P4-201ENST00000502948 ACTR10Q9NZ32 417 aa5.9□□□□□ -1.46
LSM3P4-201ENST00000502948 SLC5A6Q9Y289 635 aa5.9□□□□□ -1.46
LSM3P4-201ENST00000502948 KLK4Q9Y5K2 254 aa5.9□□□□□ -1.46
LSM3P4-201ENST00000502948 CFAP20Q9Y6A4 193 aaKnown RBP5.9□□□□□ -1.46
LSM3P4-201ENST00000502948 RP1L1Q8IWN7 2480 aaPredicted RBP5.9□□□□□ -1.47
LSM3P4-201ENST00000502948 TEX15Q9BXT5 2789 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 A0A0J9YY10 115 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 SLC5A10A0PJK1 596 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 AKR1B15C9JRZ8 316 aaPredicted RBP5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 AGPSO00116 658 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 PEX12O00623 359 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 ZSCAN9O15535 394 aaPredicted RBP5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 PJA2O43164 708 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 OR2B3O76000 313 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 TJP3O95049 919 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 FTH1P02794 183 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 POLBP06746 335 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 MMP11P24347 488 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 MC4RP32245 332 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 CETN2P41208 172 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 FOLR3P41439 243 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 MAGEA1P43355 309 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 TSFMP43897 325 aaKnown RBP5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 ARCN1P48444 511 aaKnown RBP5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 EMP3P54852 163 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 OTUD4Q01804 1114 aaKnown RBP5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 ACVR1Q04771 509 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 CHAF1BQ13112 559 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 AIMP2Q13155 320 aaKnown RBP5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 ATP1A4Q13733 1029 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 PTPRCAPQ14761 206 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 SKOR2Q2VWA4 1001 aaPredicted RBP5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 PLEKHN1Q494U1 663 aaPredicted RBP5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 TCTE1Q5JU00 501 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 UNC5AQ6ZN44 842 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 DET1Q7L5Y6 550 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 DAAM2Q86T65 1068 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 LINC00523Q86TU6 105 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 SERPINA9Q86WD7 417 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 CCDC50Q8IVM0 306 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 DNAJC22Q8N4W6 341 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 LILRA3Q8N6C8 439 aaPredicted RBP5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 TTC13Q8NBP0 860 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 OR13C4Q8NGS5 318 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 HMGCLL1Q8TB92 370 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 ACTL9Q8TC94 416 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 DLG3Q92796 817 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 ZUFSPQ96AP4 578 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 MRFAP1L1Q96HT8 127 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 C5orf34Q96MH7 638 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 PPM1MQ96MI6 270 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 RANBP9Q96S59 729 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 TBL1YQ9BQ87 522 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 MENTQ9BUN1 341 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 OSBPL8Q9BZF1 889 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 SLC7A5P2Q9GIP4 190 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 LRRC40Q9H9A6 602 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 FAM60AQ9NP50 221 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 AGPAT4Q9NRZ5 378 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 P4HTMQ9NXG6 502 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 GPN3Q9UHW5 284 aaPredicted RBP5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 ERRFI1Q9UJM3 462 aaPredicted RBP5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 NXT1Q9UKK6 140 aaKnown RBP5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 PLCL2Q9UPR0 1127 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 ICKQ9UPZ9 632 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 PCDHGA10Q9Y5H3 936 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 MRFAP1Q9Y605 127 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 CACNA1DQ01668 2161 aa5.89□□□□□ -1.47
LSM3P4-201ENST00000502948 CPAMD8Q8IZJ3 1885 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 A0A1B0GX78 115 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 HEATR9A2RTY3 570 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 FITM1A5D6W6 292 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 ANKUB1A6NFN9 424 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 VSTM2BA6NLU5 285 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 TARM1B6A8C7 271 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 H7C0C1 242 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 ZNF185O15231 689 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 KCNN4O15554 427 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 BUD23O43709 281 aaKnown RBP5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 SRPX2O60687 465 aaPredicted RBP5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 GPC4O75487 556 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 S1PR4O95977 384 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 RPN2P04844 631 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 UMODP07911 640 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 CHRM5P08912 532 aaPredicted RBP5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 OR56A5P0C7T3 313 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 TPBGLP0DKB5 382 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 CBSLP0DN79 551 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 EDN3P14138 238 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 UGT2B7P16662 529 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 ITGAXP20702 1163 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 ITGA3P26006 1051 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 PSMB4P28070 264 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 PDHA2P29803 388 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 PBLDP30039 288 aaPredicted RBP5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 STIP1P31948 543 aaKnown RBP5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 CBSP35520 551 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms