RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 TPBGLP0DKB5 382 aa19■□□□□ 0.63
SEC22A-208ENST00000487572 THRAP10827 490 aa19■□□□□ 0.63
SEC22A-208ENST00000487572 RGS4P49798 205 aa19■□□□□ 0.63
SEC22A-208ENST00000487572 PMS2P54278 862 aa19■□□□□ 0.63
SEC22A-208ENST00000487572 SLC12A2P55011 1212 aa19■□□□□ 0.63
SEC22A-208ENST00000487572 TAS2R39P59534 338 aa19■□□□□ 0.63
SEC22A-208ENST00000487572 TUBB4BP68371 445 aa19■□□□□ 0.63
SEC22A-208ENST00000487572 CAMK2BQ13554 666 aa19■□□□□ 0.63
SEC22A-208ENST00000487572 ZNF460Q14592 562 aa19■□□□□ 0.63
SEC22A-208ENST00000487572 CCSMST1Q4G0I0 132 aa19■□□□□ 0.63
SEC22A-208ENST00000487572 C3orf38Q5JPI3 329 aa19■□□□□ 0.63
SEC22A-208ENST00000487572 GRTP1Q5TC63 336 aa19■□□□□ 0.63
SEC22A-208ENST00000487572 NEK10Q6ZWH5 1172 aa19■□□□□ 0.63
SEC22A-208ENST00000487572 UBXN4Q92575 508 aa19■□□□□ 0.63
SEC22A-208ENST00000487572 LINGO1Q96FE5 620 aa19■□□□□ 0.63
SEC22A-208ENST00000487572 ZDHHC12Q96GR4 267 aa19■□□□□ 0.63
SEC22A-208ENST00000487572 CAB39LQ9H9S4 337 aa19■□□□□ 0.63
SEC22A-208ENST00000487572 SATB2Q9UPW6 733 aa19■□□□□ 0.63
SEC22A-208ENST00000487572 MN1Q10571 1320 aaPredicted RBP19■□□□□ 0.63
SEC22A-208ENST00000487572 CCDC187A0A096LP49 1063 aa18.99■□□□□ 0.63
SEC22A-208ENST00000487572 PMS2P1A4D2B8 440 aa18.99■□□□□ 0.63
SEC22A-208ENST00000487572 BTN3A3O00478 584 aa18.99■□□□□ 0.63
SEC22A-208ENST00000487572 BTN3A1O00481 513 aa18.99■□□□□ 0.63
SEC22A-208ENST00000487572 KIF1CO43896 1103 aaKnown RBP18.99■□□□□ 0.63
SEC22A-208ENST00000487572 RASSF9O75901 435 aa18.99■□□□□ 0.63
SEC22A-208ENST00000487572 C9P02748 559 aa18.99■□□□□ 0.63
SEC22A-208ENST00000487572 MPOP05164 745 aa18.99■□□□□ 0.63
SEC22A-208ENST00000487572 MPC1LP0DKB6 136 aa18.99■□□□□ 0.63
SEC22A-208ENST00000487572 CD9P21926 228 aa18.99■□□□□ 0.63
SEC22A-208ENST00000487572 TNFRSF8P28908 595 aa18.99■□□□□ 0.63
SEC22A-208ENST00000487572 SHMT2P34897 504 aa18.99■□□□□ 0.63
SEC22A-208ENST00000487572 SPRP35270 261 aaPredicted RBP18.99■□□□□ 0.63
SEC22A-208ENST00000487572 CCNFP41002 786 aa18.99■□□□□ 0.63
SEC22A-208ENST00000487572 FOXK2Q01167 660 aa18.99■□□□□ 0.63
SEC22A-208ENST00000487572 PRKAA1Q13131 559 aa18.99■□□□□ 0.63
SEC22A-208ENST00000487572 C16orf72Q14CZ0 275 aa18.99■□□□□ 0.63
SEC22A-208ENST00000487572 TRMT10CQ7L0Y3 403 aaKnown RBP18.99■□□□□ 0.63
SEC22A-208ENST00000487572 EIF1ADQ8N9N8 165 aaKnown RBP18.99■□□□□ 0.63
SEC22A-208ENST00000487572 LMNTD1Q8N9Z9 388 aa18.99■□□□□ 0.63
SEC22A-208ENST00000487572 GRAMD1AQ96CP6 724 aa18.99■□□□□ 0.63
SEC22A-208ENST00000487572 LIN37Q96GY3 246 aaPredicted RBP18.99■□□□□ 0.63
SEC22A-208ENST00000487572 IL17FQ96PD4 163 aa18.99■□□□□ 0.63
SEC22A-208ENST00000487572 LOXL2Q9Y4K0 774 aa18.99■□□□□ 0.63
SEC22A-208ENST00000487572 A0A087WUV0 522 aaPredicted RBP18.98■□□□□ 0.63
SEC22A-208ENST00000487572 TRABD2BA6NFA1 517 aa18.98■□□□□ 0.63
SEC22A-208ENST00000487572 ARHGEF33A8MVX0 844 aa18.98■□□□□ 0.63
SEC22A-208ENST00000487572 EIF3FO00303 357 aaPredicted RBP18.98■□□□□ 0.63
SEC22A-208ENST00000487572 PSIP1O75475 530 aaKnown RBP18.98■□□□□ 0.63
SEC22A-208ENST00000487572 CATP04040 527 aaKnown RBP18.98■□□□□ 0.63
SEC22A-208ENST00000487572 HGFP14210 728 aa18.98■□□□□ 0.63
SEC22A-208ENST00000487572 IL2P60568 153 aa18.98■□□□□ 0.63
SEC22A-208ENST00000487572 VSNL1P62760 191 aa18.98■□□□□ 0.63
SEC22A-208ENST00000487572 GABREP78334 506 aa18.98■□□□□ 0.63
SEC22A-208ENST00000487572 POU4F1Q01851 419 aa18.98■□□□□ 0.63
SEC22A-208ENST00000487572 ILF2Q12905 390 aaKnown RBP18.98■□□□□ 0.63
SEC22A-208ENST00000487572 TRA2AQ13595 282 aaKnown RBP eCLIP18.98■□□□□ 0.63
SEC22A-208ENST00000487572 GRB7Q14451 532 aa18.98■□□□□ 0.63
SEC22A-208ENST00000487572 USP10Q14694 798 aaKnown RBP18.98■□□□□ 0.63
SEC22A-208ENST00000487572 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.98■□□□□ 0.63
SEC22A-208ENST00000487572 LRRC8EQ6NSJ5 796 aa18.98■□□□□ 0.63
SEC22A-208ENST00000487572 CYHR1Q6ZMK1 362 aa18.98■□□□□ 0.63
SEC22A-208ENST00000487572 RAB11FIP2Q7L804 512 aa18.98■□□□□ 0.63
SEC22A-208ENST00000487572 TAX1BP1Q86VP1 789 aa18.98■□□□□ 0.63
SEC22A-208ENST00000487572 CEP97Q8IW35 865 aa18.98■□□□□ 0.63
SEC22A-208ENST00000487572 MYO1HQ8N1T3 1032 aa18.98■□□□□ 0.63
SEC22A-208ENST00000487572 C2orf73Q8N5S3 287 aaPredicted RBP18.98■□□□□ 0.63
SEC22A-208ENST00000487572 WDR36Q8NI36 951 aaKnown RBP18.98■□□□□ 0.63
SEC22A-208ENST00000487572 MAGEC3Q8TD91 643 aa18.98■□□□□ 0.63
SEC22A-208ENST00000487572 RAD51AP1Q96B01 352 aa18.98■□□□□ 0.63
SEC22A-208ENST00000487572 GPR22Q99680 433 aa18.98■□□□□ 0.63
SEC22A-208ENST00000487572 AKAP7Q9P0M2 348 aaPredicted RBP18.98■□□□□ 0.63
SEC22A-208ENST00000487572 EPHA6Q9UF33 1036 aa18.98■□□□□ 0.63
SEC22A-208ENST00000487572 UNC13CQ8NB66 2214 aa18.98■□□□□ 0.63
SEC22A-208ENST00000487572 A0A1W2PNU3 283 aaPredicted RBP18.97■□□□□ 0.63
SEC22A-208ENST00000487572 PHGDHO43175 533 aaKnown RBP18.97■□□□□ 0.63
SEC22A-208ENST00000487572 RIPK2O43353 540 aa18.97■□□□□ 0.63
SEC22A-208ENST00000487572 SYF2O95926 243 aaKnown RBP18.97■□□□□ 0.63
SEC22A-208ENST00000487572 MAP4P27816 1152 aaKnown RBP18.97■□□□□ 0.63
SEC22A-208ENST00000487572 PKLRP30613 574 aa18.97■□□□□ 0.63
SEC22A-208ENST00000487572 CSTF2P33240 577 aaKnown RBP eCLIP18.97■□□□□ 0.63
SEC22A-208ENST00000487572 SEPHS1P49903 392 aa18.97■□□□□ 0.63
SEC22A-208ENST00000487572 RAB28P51157 221 aa18.97■□□□□ 0.63
SEC22A-208ENST00000487572 BMPR2Q13873 1038 aa18.97■□□□□ 0.63
SEC22A-208ENST00000487572 ERCC6LQ2NKX8 1250 aa18.97■□□□□ 0.63
SEC22A-208ENST00000487572 CACHD1Q5VU97 1274 aa18.97■□□□□ 0.63
SEC22A-208ENST00000487572 UBE2R2Q712K3 238 aaPredicted RBP18.97■□□□□ 0.63
SEC22A-208ENST00000487572 ADGRF3Q8IZF5 1079 aa18.97■□□□□ 0.63
SEC22A-208ENST00000487572 FBXO39Q8N4B4 442 aa18.97■□□□□ 0.63
SEC22A-208ENST00000487572 ASB11Q8WXH4 323 aa18.97■□□□□ 0.63
SEC22A-208ENST00000487572 TSPAN17Q96FV3 270 aa18.97■□□□□ 0.63
SEC22A-208ENST00000487572 CMKLR1Q99788 373 aa18.97■□□□□ 0.63
SEC22A-208ENST00000487572 FUT8Q9BYC5 575 aa18.97■□□□□ 0.63
SEC22A-208ENST00000487572 TXLNGYQ9BZA5 131 aa18.97■□□□□ 0.63
SEC22A-208ENST00000487572 RAB33BQ9H082 229 aa18.97■□□□□ 0.63
SEC22A-208ENST00000487572 GPAMQ9HCL2 828 aa18.97■□□□□ 0.63
SEC22A-208ENST00000487572 PDP2Q9P2J9 529 aa18.97■□□□□ 0.63
SEC22A-208ENST00000487572 AK5Q9Y6K8 562 aa18.97■□□□□ 0.63
SEC22A-208ENST00000487572 POC1B-GALNT4F8VUJ3 575 aa18.96■□□□□ 0.63
SEC22A-208ENST00000487572 RASGRF2O14827 1237 aa18.96■□□□□ 0.63
SEC22A-208ENST00000487572 PLD2O14939 933 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms