RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 C21orf140B9A014 251 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 H3BMM5 538 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 PGRMC1O00264 195 aaKnown RBP6.79□□□□□ -1.32
VPS50-218ENST00000485994 BTN3A3O00478 584 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 C1QL1O75973 258 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 FKBP9O95302 570 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 KRT14P02533 472 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 CCNYL3P0C7X3 344 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 LIFP15018 202 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 TCP1P17987 556 aaKnown RBP6.79□□□□□ -1.32
VPS50-218ENST00000485994 WT1P19544 449 aaPredicted RBP6.79□□□□□ -1.32
VPS50-218ENST00000485994 ARNTP27540 789 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 NMBRP28336 390 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 PBLDP30039 288 aaPredicted RBP6.79□□□□□ -1.32
VPS50-218ENST00000485994 SHMT2P34897 504 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 MAGEA3P43357 314 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 FOXM1Q08050 763 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 CBLBQ13191 982 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 GBX1Q14549 363 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 SEMA3AQ14563 771 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 KIR2DS3Q14952 304 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 TBR1Q16650 682 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 KYNUQ16719 465 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 TYSND1Q2T9J0 566 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 DNTTIP2Q5QJE6 756 aaKnown RBP6.79□□□□□ -1.32
VPS50-218ENST00000485994 RNF187Q5TA31 235 aaPredicted RBP6.79□□□□□ -1.32
VPS50-218ENST00000485994 KIAA1614Q5VZ46 1190 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 PAPD7Q5XG87 772 aaKnown RBP6.79□□□□□ -1.32
VPS50-218ENST00000485994 KIAA0930Q6ICG6 404 aaPredicted RBP6.79□□□□□ -1.32
VPS50-218ENST00000485994 MRNIPQ6NTE8 343 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 TTC27Q6P3X3 843 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 UNC5DQ6UXZ4 953 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 FAM92BQ6ZTR7 304 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 SDCCAG8Q86SQ7 713 aaPredicted RBP6.79□□□□□ -1.32
VPS50-218ENST00000485994 CAND1Q86VP6 1230 aaKnown RBP6.79□□□□□ -1.32
VPS50-218ENST00000485994 RASGRP3Q8IV61 690 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 ZNF843Q8N446 348 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 TAB3Q8N5C8 712 aaPredicted RBP6.79□□□□□ -1.32
VPS50-218ENST00000485994 EXD3Q8N9H8 876 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 OR52E1Q8NGJ3 308 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 GRK7Q8WTQ7 553 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 NAT14Q8WUY8 206 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 SEC14L1Q92503 715 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 CPT1BQ92523 772 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 ELMO1Q92556 727 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 SLC22A18Q96BI1 424 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 BIRC8Q96P09 236 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 TRAPPC9Q96Q05 1148 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 CTRCQ99895 268 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 GPR87Q9BY21 358 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 ULBP3Q9BZM4 244 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 ZMYND15Q9H091 742 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 XAB2Q9HCS7 855 aaKnown RBP6.79□□□□□ -1.32
VPS50-218ENST00000485994 LHX9Q9NQ69 397 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 GEMIN8Q9NWZ8 242 aaKnown RBP6.79□□□□□ -1.32
VPS50-218ENST00000485994 PCYOX1Q9UHG3 505 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 SERTAD3Q9UJW9 196 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 SNX12Q9UMY4 172 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 ASF1AQ9Y294 204 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 MRFAP1Q9Y605 127 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 RPS6KL1Q9Y6S9 549 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 RP1L1Q8IWN7 2480 aaPredicted RBP6.79□□□□□ -1.32
VPS50-218ENST00000485994 NBASA2RRP1 2371 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 TCRBV7S3A2A0A539 114 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 PIPSLA2A3N6 862 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 SLC9B1P1A6NJY1 282 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 B8ZZF3 427 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 H3BMH7 237 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 AGRPO00253 132 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 BTN3A1O00481 513 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 KIF5CO60282 957 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 PHF2O75151 1096 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 NDUFS3O75489 264 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 KIAA0754O94854 1291 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 VAPBO95292 243 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 ESR1P03372 595 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 RPN2P04844 631 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 APOA4P06727 396 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 HBQ1P09105 142 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 RAB40ALP0C0E4 278 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 TPBGLP0DKB5 382 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 ZNF28P17035 718 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 ITGB6P18564 788 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 PAMP19021 973 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 POLR2CP19387 275 aaPredicted RBP6.78□□□□□ -1.32
VPS50-218ENST00000485994 OGNP20774 298 aaKnown RBP6.78□□□□□ -1.32
VPS50-218ENST00000485994 CDH3P22223 829 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 MGAT1P26572 445 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 ATP5DP30049 168 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 PREPP48147 710 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 GABRA4P48169 554 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 ARL4DP49703 201 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 SESN2P58004 480 aaPredicted RBP6.78□□□□□ -1.32
VPS50-218ENST00000485994 PPP1CAP62136 330 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 GPS1Q13098 491 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 SRSF6Q13247 344 aaKnown RBP6.78□□□□□ -1.32
VPS50-218ENST00000485994 TUBB3Q13509 450 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 SLC5A12Q1EHB4 618 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 ANKRD20A4Q4UJ75 823 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 PWWP2BQ6NUJ5 590 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms