RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 TM9SF4Q92544 642 aa6.43□□□□□ -1.38
SMC4-217ENST00000485867 SLC41A2Q96JW4 573 aa6.43□□□□□ -1.38
SMC4-217ENST00000485867 ZNF514Q96K75 400 aaPredicted RBP6.43□□□□□ -1.38
SMC4-217ENST00000485867 NSMCE3Q96MG7 304 aa6.43□□□□□ -1.38
SMC4-217ENST00000485867 PLEKHG4BQ96PX9 1271 aa6.43□□□□□ -1.38
SMC4-217ENST00000485867 TSG101Q99816 390 aa6.43□□□□□ -1.38
SMC4-217ENST00000485867 SLX1AQ9BQ83 275 aa6.43□□□□□ -1.38
SMC4-217ENST00000485867 KRTAP17-1Q9BYP8 105 aa6.43□□□□□ -1.38
SMC4-217ENST00000485867 ZBTB20Q9HC78 741 aaPredicted RBP6.43□□□□□ -1.38
SMC4-217ENST00000485867 MCCC2Q9HCC0 563 aa6.43□□□□□ -1.38
SMC4-217ENST00000485867 UBE2TQ9NPD8 197 aaPredicted RBP6.43□□□□□ -1.38
SMC4-217ENST00000485867 SEMA5BQ9P283 1151 aa6.43□□□□□ -1.38
SMC4-217ENST00000485867 HPSEQ9Y251 543 aa6.43□□□□□ -1.38
SMC4-217ENST00000485867 PRKAB1Q9Y478 270 aa6.43□□□□□ -1.38
SMC4-217ENST00000485867 MAP1AP78559 2803 aaPredicted RBP6.43□□□□□ -1.38
SMC4-217ENST00000485867 IGHV5-51A0A0C4DH38 117 aa6.42□□□□□ -1.38
SMC4-217ENST00000485867 OR5K4A6NMS3 321 aa6.42□□□□□ -1.38
SMC4-217ENST00000485867 C19orf84I3L1E1 186 aa6.42□□□□□ -1.38
SMC4-217ENST00000485867 J3KR12 359 aa6.42□□□□□ -1.38
SMC4-217ENST00000485867 PSMD11O00231 422 aa6.42□□□□□ -1.38
SMC4-217ENST00000485867 GRID2O43424 1007 aa6.42□□□□□ -1.38
SMC4-217ENST00000485867 DNAJC6O75061 913 aa6.42□□□□□ -1.38
SMC4-217ENST00000485867 SCRG1O75711 98 aa6.42□□□□□ -1.38
SMC4-217ENST00000485867 CYP7B1O75881 506 aa6.42□□□□□ -1.38
SMC4-217ENST00000485867 CAPN1P07384 714 aa6.42□□□□□ -1.38
SMC4-217ENST00000485867 EBLN1P0CF75 366 aa6.42□□□□□ -1.38
SMC4-217ENST00000485867 ACP5P13686 325 aa6.42□□□□□ -1.38
SMC4-217ENST00000485867 USP8P40818 1118 aa6.42□□□□□ -1.38
SMC4-217ENST00000485867 PRCPP42785 496 aa6.42□□□□□ -1.38
SMC4-217ENST00000485867 GABRB2P47870 512 aa6.42□□□□□ -1.38
SMC4-217ENST00000485867 KCNK10P57789 538 aa6.42□□□□□ -1.38
SMC4-217ENST00000485867 PPP1CAP62136 330 aa6.42□□□□□ -1.38
SMC4-217ENST00000485867 OTUD4Q01804 1114 aaKnown RBP6.42□□□□□ -1.38
SMC4-217ENST00000485867 ACY1Q03154 408 aa6.42□□□□□ -1.38
SMC4-217ENST00000485867 TLE4Q04727 773 aa6.42□□□□□ -1.38
SMC4-217ENST00000485867 GTF3C1Q12789 2109 aa6.42□□□□□ -1.38
SMC4-217ENST00000485867 ICAM4Q14773 271 aa6.42□□□□□ -1.38
SMC4-217ENST00000485867 CDSNQ15517 529 aa6.42□□□□□ -1.38
SMC4-217ENST00000485867 PARP15Q460N3 678 aa6.42□□□□□ -1.38
SMC4-217ENST00000485867 DCAF10Q5QP82 559 aa6.42□□□□□ -1.38
SMC4-217ENST00000485867 IRGCQ6NXR0 463 aa6.42□□□□□ -1.38
SMC4-217ENST00000485867 CERS6Q6ZMG9 384 aa6.42□□□□□ -1.38
SMC4-217ENST00000485867 RFLNAQ6ZTI6 216 aa6.42□□□□□ -1.38
SMC4-217ENST00000485867 ENOSF1Q7L5Y1 443 aa6.42□□□□□ -1.38
SMC4-217ENST00000485867 CHST15Q7LFX5 561 aaPredicted RBP6.42□□□□□ -1.38
SMC4-217ENST00000485867 TECPR1Q7Z6L1 1165 aa6.42□□□□□ -1.38
SMC4-217ENST00000485867 MRGPREQ86SM8 312 aa6.42□□□□□ -1.38
SMC4-217ENST00000485867 RAB43Q86YS6 212 aa6.42□□□□□ -1.38
SMC4-217ENST00000485867 GALNT16Q8N428 558 aa6.42□□□□□ -1.38
SMC4-217ENST00000485867 PPP4R1Q8TF05 950 aa6.42□□□□□ -1.38
SMC4-217ENST00000485867 SHC3Q92529 594 aa6.42□□□□□ -1.38
SMC4-217ENST00000485867 ZDHHC12Q96GR4 267 aa6.42□□□□□ -1.38
SMC4-217ENST00000485867 COX14Q96I36 57 aa6.42□□□□□ -1.38
SMC4-217ENST00000485867 LRFN5Q96NI6 719 aa6.42□□□□□ -1.38
SMC4-217ENST00000485867 WDR77Q9BQA1 342 aaPredicted RBP6.42□□□□□ -1.38
SMC4-217ENST00000485867 MLPHQ9BV36 600 aaPredicted RBP6.42□□□□□ -1.38
SMC4-217ENST00000485867 NLNQ9BYT8 704 aa6.42□□□□□ -1.38
SMC4-217ENST00000485867 SCAND2PQ9GZW5 306 aaPredicted RBP6.42□□□□□ -1.38
SMC4-217ENST00000485867 ABCG8Q9H221 673 aa6.42□□□□□ -1.38
SMC4-217ENST00000485867 PLCB1Q9NQ66 1216 aa6.42□□□□□ -1.38
SMC4-217ENST00000485867 ASH2LQ9UBL3 628 aa6.42□□□□□ -1.38
SMC4-217ENST00000485867 EPHA6Q9UF33 1036 aa6.42□□□□□ -1.38
SMC4-217ENST00000485867 NEU2Q9Y3R4 380 aa6.42□□□□□ -1.38
SMC4-217ENST00000485867 NBEAL1Q6ZS30 2694 aa6.42□□□□□ -1.38
SMC4-217ENST00000485867 A0A0U1RQS6 177 aa6.41□□□□□ -1.38
SMC4-217ENST00000485867 NPIPB15A6NHN6 443 aaPredicted RBP6.41□□□□□ -1.38
SMC4-217ENST00000485867 GOLGA8SH3BPF8 625 aa6.41□□□□□ -1.38
SMC4-217ENST00000485867 GPR42O15529 346 aa6.41□□□□□ -1.38
SMC4-217ENST00000485867 HTRA2O43464 458 aaPredicted RBP6.41□□□□□ -1.38
SMC4-217ENST00000485867 KLHL41O60662 606 aa6.41□□□□□ -1.38
SMC4-217ENST00000485867 PRAMEF11O60813 436 aa6.41□□□□□ -1.38
SMC4-217ENST00000485867 JRKO75564 520 aa6.41□□□□□ -1.38
SMC4-217ENST00000485867 ASMTLO95671 621 aa6.41□□□□□ -1.38
SMC4-217ENST00000485867 VIPP01282 170 aa6.41□□□□□ -1.38
SMC4-217ENST00000485867 JCHAINP01591 159 aa6.41□□□□□ -1.38
SMC4-217ENST00000485867 KLK3P07288 261 aaPredicted RBP6.41□□□□□ -1.38
SMC4-217ENST00000485867 CYP2A6P11509 494 aaPredicted RBP6.41□□□□□ -1.38
SMC4-217ENST00000485867 XRCC1P18887 633 aaPredicted RBP6.41□□□□□ -1.38
SMC4-217ENST00000485867 EPHB2P29323 1055 aa6.41□□□□□ -1.38
SMC4-217ENST00000485867 OTX2P32243 289 aa6.41□□□□□ -1.38
SMC4-217ENST00000485867 RORAP35398 523 aa6.41□□□□□ -1.38
SMC4-217ENST00000485867 SYKP43405 635 aa6.41□□□□□ -1.38
SMC4-217ENST00000485867 GSDMDP57764 484 aa6.41□□□□□ -1.38
SMC4-217ENST00000485867 LRRC63Q05C16 580 aa6.41□□□□□ -1.38
SMC4-217ENST00000485867 PAK1Q13153 545 aa6.41□□□□□ -1.38
SMC4-217ENST00000485867 PTPRRQ15256 657 aa6.41□□□□□ -1.38
SMC4-217ENST00000485867 CDO1Q16878 200 aa6.41□□□□□ -1.38
SMC4-217ENST00000485867 C15orf59Q2T9L4 293 aaPredicted RBP6.41□□□□□ -1.38
SMC4-217ENST00000485867 CCDC40Q4G0X9 1142 aa6.41□□□□□ -1.38
SMC4-217ENST00000485867 COBLL1Q53SF7 1204 aa6.41□□□□□ -1.38
SMC4-217ENST00000485867 PLEKHS1Q5SXH7 462 aa6.41□□□□□ -1.38
SMC4-217ENST00000485867 B3GNTL1Q67FW5 361 aaPredicted RBP6.41□□□□□ -1.38
SMC4-217ENST00000485867 GJB7Q6PEY0 223 aa6.41□□□□□ -1.38
SMC4-217ENST00000485867 ARCQ7LC44 396 aa6.41□□□□□ -1.38
SMC4-217ENST00000485867 TSPAN33Q86UF1 283 aa6.41□□□□□ -1.38
SMC4-217ENST00000485867 TGIF2LYQ8IUE0 185 aa6.41□□□□□ -1.38
SMC4-217ENST00000485867 TMEM126BQ8IUX1 230 aa6.41□□□□□ -1.38
SMC4-217ENST00000485867 DSELQ8IZU8 1212 aa6.41□□□□□ -1.38
SMC4-217ENST00000485867 UMODL1-AS1Q8N2C9 162 aa6.41□□□□□ -1.38
SMC4-217ENST00000485867 CCDC185Q8N715 623 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms