RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 ANKRD34CP0C6C1 535 aa9.73□□□□□ -0.85
CPSF4-213ENST00000484112 BRAFP15056 766 aa9.73□□□□□ -0.85
CPSF4-213ENST00000484112 PGAM1P18669 254 aa9.73□□□□□ -0.85
CPSF4-213ENST00000484112 RPS3P23396 243 aaKnown RBP eCLIP9.73□□□□□ -0.85
CPSF4-213ENST00000484112 NMBRP28336 390 aa9.73□□□□□ -0.85
CPSF4-213ENST00000484112 CDKN1CP49918 316 aaPredicted RBP9.73□□□□□ -0.85
CPSF4-213ENST00000484112 PMS2P54278 862 aa9.73□□□□□ -0.85
CPSF4-213ENST00000484112 DNASE1L3Q13609 305 aa9.73□□□□□ -0.85
CPSF4-213ENST00000484112 NFE2L1Q14494 772 aa9.73□□□□□ -0.85
CPSF4-213ENST00000484112 IL11RAQ14626 422 aa9.73□□□□□ -0.85
CPSF4-213ENST00000484112 WHAMMP3Q1A5X7 153 aa9.73□□□□□ -0.85
CPSF4-213ENST00000484112 TYSND1Q2T9J0 566 aa9.73□□□□□ -0.85
CPSF4-213ENST00000484112 ZNF658BQ4V348 819 aaPredicted RBP9.73□□□□□ -0.85
CPSF4-213ENST00000484112 IZUMO3Q5VZ72 239 aa9.73□□□□□ -0.85
CPSF4-213ENST00000484112 CAPRIN2Q6IMN6 1127 aaKnown RBP9.73□□□□□ -0.85
CPSF4-213ENST00000484112 CASC4Q6P4E1 433 aa9.73□□□□□ -0.85
CPSF4-213ENST00000484112 KLHL35Q6PF15 583 aa9.73□□□□□ -0.85
CPSF4-213ENST00000484112 FAM92BQ6ZTR7 304 aa9.73□□□□□ -0.85
CPSF4-213ENST00000484112 TMEM26Q6ZUK4 368 aa9.73□□□□□ -0.85
CPSF4-213ENST00000484112 DET1Q7L5Y6 550 aa9.73□□□□□ -0.85
CPSF4-213ENST00000484112 SSC4DQ8WTU2 575 aa9.73□□□□□ -0.85
CPSF4-213ENST00000484112 MFSD3Q96ES6 412 aa9.73□□□□□ -0.85
CPSF4-213ENST00000484112 SIGLEC10Q96LC7 697 aa9.73□□□□□ -0.85
CPSF4-213ENST00000484112 PANX3Q96QZ0 392 aa9.73□□□□□ -0.85
CPSF4-213ENST00000484112 CARD6Q9BX69 1037 aa9.73□□□□□ -0.85
CPSF4-213ENST00000484112 TRIM55Q9BYV6 548 aa9.73□□□□□ -0.85
CPSF4-213ENST00000484112 RAB33BQ9H082 229 aa9.73□□□□□ -0.85
CPSF4-213ENST00000484112 COG4Q9H9E3 785 aa9.73□□□□□ -0.85
CPSF4-213ENST00000484112 SLC40A1Q9NP59 571 aa9.73□□□□□ -0.85
CPSF4-213ENST00000484112 INTS10Q9NVR2 710 aaKnown RBP9.73□□□□□ -0.85
CPSF4-213ENST00000484112 OGFRQ9NZT2 677 aa9.73□□□□□ -0.85
CPSF4-213ENST00000484112 ZNF624Q9P2J8 865 aaPredicted RBP9.73□□□□□ -0.85
CPSF4-213ENST00000484112 CDC23Q9UJX2 597 aa9.73□□□□□ -0.85
CPSF4-213ENST00000484112 PADI1Q9ULC6 663 aa9.73□□□□□ -0.85
CPSF4-213ENST00000484112 MN1Q10571 1320 aaPredicted RBP9.73□□□□□ -0.85
CPSF4-213ENST00000484112 RELNP78509 3460 aa9.72□□□□□ -0.85
CPSF4-213ENST00000484112 EFCAB8A8MWE9 144 aa9.72□□□□□ -0.85
CPSF4-213ENST00000484112 IFRD1O00458 451 aaPredicted RBP9.72□□□□□ -0.85
CPSF4-213ENST00000484112 TTI1O43156 1089 aa9.72□□□□□ -0.85
CPSF4-213ENST00000484112 KDM1AO60341 852 aa9.72□□□□□ -0.85
CPSF4-213ENST00000484112 SEMA7AO75326 666 aa9.72□□□□□ -0.85
CPSF4-213ENST00000484112 AVILO75366 819 aa9.72□□□□□ -0.85
CPSF4-213ENST00000484112 NDUFS3O75489 264 aa9.72□□□□□ -0.85
CPSF4-213ENST00000484112 SEC31AO94979 1220 aaKnown RBP9.72□□□□□ -0.85
CPSF4-213ENST00000484112 VAPBO95292 243 aa9.72□□□□□ -0.85
CPSF4-213ENST00000484112 ESR1P03372 595 aa9.72□□□□□ -0.85
CPSF4-213ENST00000484112 MTHFD1P11586 935 aaKnown RBP9.72□□□□□ -0.85
CPSF4-213ENST00000484112 RPL10P27635 214 aaKnown RBP9.72□□□□□ -0.85
CPSF4-213ENST00000484112 SLC19A1P41440 591 aa9.72□□□□□ -0.85
CPSF4-213ENST00000484112 ARCN1P48444 511 aaKnown RBP9.72□□□□□ -0.85
CPSF4-213ENST00000484112 CCL11P51671 97 aa9.72□□□□□ -0.85
CPSF4-213ENST00000484112 CRADDP78560 199 aa9.72□□□□□ -0.85
CPSF4-213ENST00000484112 ILF2Q12905 390 aaKnown RBP9.72□□□□□ -0.85
CPSF4-213ENST00000484112 CHAF1BQ13112 559 aa9.72□□□□□ -0.85
CPSF4-213ENST00000484112 FRG1Q14331 258 aaKnown RBP9.72□□□□□ -0.85
CPSF4-213ENST00000484112 RPE65Q16518 533 aa9.72□□□□□ -0.85
CPSF4-213ENST00000484112 NADK2Q4G0N4 442 aa9.72□□□□□ -0.85
CPSF4-213ENST00000484112 ANKRD20A4Q4UJ75 823 aa9.72□□□□□ -0.85
CPSF4-213ENST00000484112 CACHD1Q5VU97 1274 aa9.72□□□□□ -0.85
CPSF4-213ENST00000484112 HIBCHQ6NVY1 386 aaPredicted RBP9.72□□□□□ -0.85
CPSF4-213ENST00000484112 IRGCQ6NXR0 463 aa9.72□□□□□ -0.85
CPSF4-213ENST00000484112 PPP1R3BQ86XI6 285 aa9.72□□□□□ -0.85
CPSF4-213ENST00000484112 CFAP206Q8IYR0 622 aa9.72□□□□□ -0.85
CPSF4-213ENST00000484112 CARFQ8N187 725 aa9.72□□□□□ -0.85
CPSF4-213ENST00000484112 GALNT11Q8NCW6 608 aa9.72□□□□□ -0.85
CPSF4-213ENST00000484112 CT55Q8WUE5 264 aa9.72□□□□□ -0.85
CPSF4-213ENST00000484112 ASZ1Q8WWH4 475 aa9.72□□□□□ -0.85
CPSF4-213ENST00000484112 C16orf45Q96MC5 204 aaPredicted RBP9.72□□□□□ -0.85
CPSF4-213ENST00000484112 RUFY1Q96T51 708 aa9.72□□□□□ -0.85
CPSF4-213ENST00000484112 KRT12Q99456 494 aa9.72□□□□□ -0.85
CPSF4-213ENST00000484112 EBNA1BP2Q99848 306 aaKnown RBP9.72□□□□□ -0.85
CPSF4-213ENST00000484112 ERP44Q9BS26 406 aa9.72□□□□□ -0.85
CPSF4-213ENST00000484112 PHACTR1Q9C0D0 580 aa9.72□□□□□ -0.85
CPSF4-213ENST00000484112 RAB17Q9H0T7 212 aa9.72□□□□□ -0.85
CPSF4-213ENST00000484112 ZNF768Q9H5H4 540 aaKnown RBP9.72□□□□□ -0.85
CPSF4-213ENST00000484112 MVB12BQ9H7P6 319 aa9.72□□□□□ -0.85
CPSF4-213ENST00000484112 LHX9Q9NQ69 397 aa9.72□□□□□ -0.85
CPSF4-213ENST00000484112 WHRNQ9P202 907 aa9.72□□□□□ -0.85
CPSF4-213ENST00000484112 MAP10Q9P2G4 905 aa9.72□□□□□ -0.85
CPSF4-213ENST00000484112 EPHA6Q9UF33 1036 aa9.72□□□□□ -0.85
CPSF4-213ENST00000484112 GNPTGQ9UJJ9 305 aa9.72□□□□□ -0.85
CPSF4-213ENST00000484112 WDR37Q9Y2I8 494 aa9.72□□□□□ -0.85
CPSF4-213ENST00000484112 MRFAP1Q9Y605 127 aa9.72□□□□□ -0.85
CPSF4-213ENST00000484112 COMMD10Q9Y6G5 202 aa9.72□□□□□ -0.85
CPSF4-213ENST00000484112 FAM169AQ9Y6X4 670 aa9.72□□□□□ -0.85
CPSF4-213ENST00000484112 COL12A1Q99715 3063 aa9.72□□□□□ -0.85
CPSF4-213ENST00000484112 ZCWPW2A0A1B0GU75 182 aa9.71□□□□□ -0.86
CPSF4-213ENST00000484112 CCDC78A2IDD5 438 aa9.71□□□□□ -0.86
CPSF4-213ENST00000484112 OR51F1A6NGY5 319 aa9.71□□□□□ -0.86
CPSF4-213ENST00000484112 ARGFXA6NJG6 315 aa9.71□□□□□ -0.86
CPSF4-213ENST00000484112 GOLGA8MH3BSY2 632 aa9.71□□□□□ -0.86
CPSF4-213ENST00000484112 MATN2O00339 956 aa9.71□□□□□ -0.86
CPSF4-213ENST00000484112 MT-ND3P03897 115 aa9.71□□□□□ -0.86
CPSF4-213ENST00000484112 RNF224P0DH78 156 aa9.71□□□□□ -0.86
CPSF4-213ENST00000484112 FGF5P12034 268 aa9.71□□□□□ -0.86
CPSF4-213ENST00000484112 ARNTP27540 789 aa9.71□□□□□ -0.86
CPSF4-213ENST00000484112 CAPZBP47756 277 aa9.71□□□□□ -0.86
CPSF4-213ENST00000484112 PGDP52209 483 aa9.71□□□□□ -0.86
CPSF4-213ENST00000484112 DRG2P55039 364 aaKnown RBP9.71□□□□□ -0.86
CPSF4-213ENST00000484112 ARL4CP56559 192 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms