RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-222	ENST00000477937	SOX13	Q9UN79	622 aa		13.37	□□□□□ -0.27
HDAC7-222	ENST00000477937	FASN	P49327	2511 aa	Known RBP	13.37	□□□□□ -0.27
HDAC7-222	ENST00000477937	C21orf140	B9A014	251 aa		13.36	□□□□□ -0.27
HDAC7-222	ENST00000477937	TMEM150C	B9EJG8	249 aa		13.36	□□□□□ -0.27
HDAC7-222	ENST00000477937	KIF5C	O60282	957 aa		13.36	□□□□□ -0.27
HDAC7-222	ENST00000477937	AVIL	O75366	819 aa		13.36	□□□□□ -0.27
HDAC7-222	ENST00000477937	RPN2	P04844	631 aa		13.36	□□□□□ -0.27
HDAC7-222	ENST00000477937	KLK3	P07288	261 aa	Predicted RBP	13.36	□□□□□ -0.27
HDAC7-222	ENST00000477937	CHRM5	P08912	532 aa	Predicted RBP	13.36	□□□□□ -0.27
HDAC7-222	ENST00000477937	PAM	P19021	973 aa		13.36	□□□□□ -0.27
HDAC7-222	ENST00000477937	RPS3	P23396	243 aa	Known RBP eCLIP	13.36	□□□□□ -0.27
HDAC7-222	ENST00000477937	OAS2	P29728	719 aa	Known RBP	13.36	□□□□□ -0.27
HDAC7-222	ENST00000477937	POLE2	P56282	527 aa		13.36	□□□□□ -0.27
HDAC7-222	ENST00000477937	ABR	Q12979	859 aa		13.36	□□□□□ -0.27
HDAC7-222	ENST00000477937	DNASE1L3	Q13609	305 aa		13.36	□□□□□ -0.27
HDAC7-222	ENST00000477937	ERV3-1	Q14264	604 aa		13.36	□□□□□ -0.27
HDAC7-222	ENST00000477937	DEFB109B	Q30KR1	87 aa		13.36	□□□□□ -0.27
HDAC7-222	ENST00000477937	CASC4	Q6P4E1	433 aa		13.36	□□□□□ -0.27
HDAC7-222	ENST00000477937	VRK3	Q8IV63	474 aa		13.36	□□□□□ -0.27
HDAC7-222	ENST00000477937	KRT222	Q8N1A0	295 aa		13.36	□□□□□ -0.27
HDAC7-222	ENST00000477937	CFAP61	Q8NHU2	1237 aa		13.36	□□□□□ -0.27
HDAC7-222	ENST00000477937	GSDMB	Q8TAX9	411 aa		13.36	□□□□□ -0.27
HDAC7-222	ENST00000477937	ACTRT1	Q8TDG2	376 aa		13.36	□□□□□ -0.27
HDAC7-222	ENST00000477937	COG1	Q8WTW3	980 aa		13.36	□□□□□ -0.27
HDAC7-222	ENST00000477937	CT55	Q8WUE5	264 aa		13.36	□□□□□ -0.27
HDAC7-222	ENST00000477937	APOBEC4	Q8WW27	367 aa	Known RBP	13.36	□□□□□ -0.27
HDAC7-222	ENST00000477937	CPT1B	Q92523	772 aa		13.36	□□□□□ -0.27
HDAC7-222	ENST00000477937	OR2A14	Q96R47	310 aa		13.36	□□□□□ -0.27
HDAC7-222	ENST00000477937	GPR87	Q9BY21	358 aa		13.36	□□□□□ -0.27
HDAC7-222	ENST00000477937	FAM117A	Q9C073	453 aa		13.36	□□□□□ -0.27
HDAC7-222	ENST00000477937	KLHL25	Q9H0H3	589 aa		13.36	□□□□□ -0.27
HDAC7-222	ENST00000477937	SLC25A18	Q9H1K4	315 aa		13.36	□□□□□ -0.27
HDAC7-222	ENST00000477937	P2RY12	Q9H244	342 aa		13.36	□□□□□ -0.27
HDAC7-222	ENST00000477937	STARD5	Q9NSY2	213 aa		13.36	□□□□□ -0.27
HDAC7-222	ENST00000477937	SAMD15	Q9P1V8	674 aa		13.36	□□□□□ -0.27
HDAC7-222	ENST00000477937	CDYL	Q9Y232	598 aa		13.36	□□□□□ -0.27
HDAC7-222	ENST00000477937	PCDHGA6	Q9Y5G7	932 aa		13.36	□□□□□ -0.27
HDAC7-222	ENST00000477937	GOLGA6L10	A0A0M3HER8	536 aa		13.35	□□□□□ -0.27
HDAC7-222	ENST00000477937	MAGEB16	A2A368	324 aa		13.35	□□□□□ -0.27
HDAC7-222	ENST00000477937	CES2	O00748	559 aa		13.35	□□□□□ -0.27
HDAC7-222	ENST00000477937	CREG1	O75629	220 aa		13.35	□□□□□ -0.27
HDAC7-222	ENST00000477937	SLCO2B1	O94956	709 aa		13.35	□□□□□ -0.27
HDAC7-222	ENST00000477937	RECK	O95980	971 aa		13.35	□□□□□ -0.27
HDAC7-222	ENST00000477937	TPBGL	P0DKB5	382 aa		13.35	□□□□□ -0.27
HDAC7-222	ENST00000477937	MLN	P12872	115 aa		13.35	□□□□□ -0.27
HDAC7-222	ENST00000477937	PLA2G2A	P14555	144 aa		13.35	□□□□□ -0.27
HDAC7-222	ENST00000477937	PVR	P15151	417 aa		13.35	□□□□□ -0.27
HDAC7-222	ENST00000477937	UGT2B7	P16662	529 aa		13.35	□□□□□ -0.27
HDAC7-222	ENST00000477937	ARNT	P27540	789 aa		13.35	□□□□□ -0.27
HDAC7-222	ENST00000477937	RPS15	P62841	145 aa	Known RBP	13.35	□□□□□ -0.27
HDAC7-222	ENST00000477937	KCNAB2	Q13303	367 aa		13.35	□□□□□ -0.27
HDAC7-222	ENST00000477937	RNF187	Q5TA31	235 aa	Predicted RBP	13.35	□□□□□ -0.27
HDAC7-222	ENST00000477937	ATP1A1-AS1	Q5TC04	95 aa		13.35	□□□□□ -0.27
HDAC7-222	ENST00000477937	ANKRD22	Q5VYY1	191 aa		13.35	□□□□□ -0.27
HDAC7-222	ENST00000477937	KIAA0930	Q6ICG6	404 aa	Predicted RBP	13.35	□□□□□ -0.27
HDAC7-222	ENST00000477937	FAM199X	Q6PEV8	388 aa	Predicted RBP	13.35	□□□□□ -0.27
HDAC7-222	ENST00000477937	TTC23L	Q6PF05	361 aa		13.35	□□□□□ -0.27
HDAC7-222	ENST00000477937	UNC5D	Q6UXZ4	953 aa		13.35	□□□□□ -0.27
HDAC7-222	ENST00000477937	OTOA	Q7RTW8	1153 aa		13.35	□□□□□ -0.27
HDAC7-222	ENST00000477937	CAND1	Q86VP6	1230 aa	Known RBP	13.35	□□□□□ -0.27
HDAC7-222	ENST00000477937	MCU	Q8NE86	351 aa		13.35	□□□□□ -0.27
HDAC7-222	ENST00000477937	LKAAEAR1	Q8TD35	194 aa		13.35	□□□□□ -0.27
HDAC7-222	ENST00000477937	GRK7	Q8WTQ7	553 aa		13.35	□□□□□ -0.27
HDAC7-222	ENST00000477937	ANP32B	Q92688	251 aa	Known RBP	13.35	□□□□□ -0.27
HDAC7-222	ENST00000477937	N4BP2L2	Q92802	583 aa	Predicted RBP	13.35	□□□□□ -0.27
HDAC7-222	ENST00000477937	MR1	Q95460	341 aa		13.35	□□□□□ -0.27
HDAC7-222	ENST00000477937	TCTN2	Q96GX1	697 aa		13.35	□□□□□ -0.27
HDAC7-222	ENST00000477937	LRFN5	Q96NI6	719 aa		13.35	□□□□□ -0.27
HDAC7-222	ENST00000477937	TCF12	Q99081	682 aa		13.35	□□□□□ -0.27
HDAC7-222	ENST00000477937	SLC7A5P2	Q9GIP4	190 aa		13.35	□□□□□ -0.27
HDAC7-222	ENST00000477937	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	13.35	□□□□□ -0.27
HDAC7-222	ENST00000477937	XAB2	Q9HCS7	855 aa	Known RBP	13.35	□□□□□ -0.27
HDAC7-222	ENST00000477937	TRMT1	Q9NXH9	659 aa	Known RBP	13.35	□□□□□ -0.27
HDAC7-222	ENST00000477937	TUBD1	Q9UJT1	453 aa		13.35	□□□□□ -0.27
HDAC7-222	ENST00000477937	PLAGL1	Q9UM63	463 aa		13.35	□□□□□ -0.27
HDAC7-222	ENST00000477937	POLH	Q9Y253	713 aa		13.35	□□□□□ -0.27
HDAC7-222	ENST00000477937	HEMK1	Q9Y5R4	338 aa	Predicted RBP	13.35	□□□□□ -0.27
HDAC7-222	ENST00000477937	CCDC88C	Q9P219	2028 aa		13.35	□□□□□ -0.27
HDAC7-222	ENST00000477937	SEC16A	O15027	2179 aa		13.35	□□□□□ -0.27
HDAC7-222	ENST00000477937	BAHCC1	Q9P281	2608 aa		13.35	□□□□□ -0.27
HDAC7-222	ENST00000477937		A0A0J9YY10	115 aa		13.34	□□□□□ -0.27
HDAC7-222	ENST00000477937	SDR42E2	A6NKP2	422 aa		13.34	□□□□□ -0.27
HDAC7-222	ENST00000477937	ISM1	B1AKI9	464 aa		13.34	□□□□□ -0.27
HDAC7-222	ENST00000477937	GOLGA8K	D6RF30	607 aa		13.34	□□□□□ -0.27
HDAC7-222	ENST00000477937		H3BMM5	538 aa		13.34	□□□□□ -0.27
HDAC7-222	ENST00000477937	GOLGA8T	H3BQL2	631 aa		13.34	□□□□□ -0.27
HDAC7-222	ENST00000477937	PHF2	O75151	1096 aa		13.34	□□□□□ -0.27
HDAC7-222	ENST00000477937	OGN	P20774	298 aa	Known RBP	13.34	□□□□□ -0.27
HDAC7-222	ENST00000477937	CYP2A7	P20853	494 aa		13.34	□□□□□ -0.27
HDAC7-222	ENST00000477937	PTPN4	P29074	926 aa		13.34	□□□□□ -0.27
HDAC7-222	ENST00000477937	RAB28	P51157	221 aa		13.34	□□□□□ -0.27
HDAC7-222	ENST00000477937	EIF3B	P55884	814 aa	Known RBP	13.34	□□□□□ -0.27
HDAC7-222	ENST00000477937	GPS2	Q13227	327 aa		13.34	□□□□□ -0.27
HDAC7-222	ENST00000477937	KIR2DS3	Q14952	304 aa		13.34	□□□□□ -0.27
HDAC7-222	ENST00000477937	KYNU	Q16719	465 aa		13.34	□□□□□ -0.27
HDAC7-222	ENST00000477937	CDHR3	Q6ZTQ4	885 aa		13.34	□□□□□ -0.27
HDAC7-222	ENST00000477937	TRIM73	Q86UV7	250 aa		13.34	□□□□□ -0.27
HDAC7-222	ENST00000477937	DCUN1D3	Q8IWE4	304 aa		13.34	□□□□□ -0.27
HDAC7-222	ENST00000477937	GPR135	Q8IZ08	494 aa		13.34	□□□□□ -0.27
HDAC7-222	ENST00000477937	C19orf47	Q8N9M1	422 aa	Known RBP	13.34	□□□□□ -0.27

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