RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 RNF14Q9UBS8 474 aa9.91□□□□□ -0.82
CCM2-208ENST00000476594 SERTAD3Q9UJW9 196 aa9.91□□□□□ -0.82
CCM2-208ENST00000476594 SLC39A10Q9ULF5 831 aa9.91□□□□□ -0.82
CCM2-208ENST00000476594 MAD1L1Q9Y6D9 718 aa9.91□□□□□ -0.82
CCM2-208ENST00000476594 LOC400499M0QZD8 3231 aa9.9□□□□□ -0.82
CCM2-208ENST00000476594 LOC101059948A0A1B0GTJ6 334 aa9.9□□□□□ -0.82
CCM2-208ENST00000476594 CTAGE9A4FU28 777 aa9.9□□□□□ -0.82
CCM2-208ENST00000476594 SLC9B1P1A6NJY1 282 aa9.9□□□□□ -0.82
CCM2-208ENST00000476594 ISM1B1AKI9 464 aa9.9□□□□□ -0.82
CCM2-208ENST00000476594 GPC4O75487 556 aa9.9□□□□□ -0.82
CCM2-208ENST00000476594 USP1O94782 785 aa9.9□□□□□ -0.82
CCM2-208ENST00000476594 FOLR1P15328 257 aa9.9□□□□□ -0.82
CCM2-208ENST00000476594 CYP2A7P20853 494 aa9.9□□□□□ -0.82
CCM2-208ENST00000476594 ACADLP28330 430 aa9.9□□□□□ -0.82
CCM2-208ENST00000476594 CCR7P32248 378 aa9.9□□□□□ -0.82
CCM2-208ENST00000476594 DLSTP36957 453 aa9.9□□□□□ -0.82
CCM2-208ENST00000476594 CCR10P46092 362 aa9.9□□□□□ -0.82
CCM2-208ENST00000476594 ARCN1P48444 511 aaKnown RBP9.9□□□□□ -0.82
CCM2-208ENST00000476594 RAB28P51157 221 aa9.9□□□□□ -0.82
CCM2-208ENST00000476594 CSE1LP55060 971 aaKnown RBP9.9□□□□□ -0.82
CCM2-208ENST00000476594 PPP1CAP62136 330 aa9.9□□□□□ -0.82
CCM2-208ENST00000476594 RPS15P62841 145 aaKnown RBP9.9□□□□□ -0.82
CCM2-208ENST00000476594 TYSND1Q2T9J0 566 aa9.9□□□□□ -0.82
CCM2-208ENST00000476594 TTC27Q6P3X3 843 aa9.9□□□□□ -0.82
CCM2-208ENST00000476594 GALNT6Q8NCL4 622 aa9.9□□□□□ -0.82
CCM2-208ENST00000476594 DENND1AQ8TEH3 1009 aa9.9□□□□□ -0.82
CCM2-208ENST00000476594 COG1Q8WTW3 980 aa9.9□□□□□ -0.82
CCM2-208ENST00000476594 STARD8Q92502 1023 aa9.9□□□□□ -0.82
CCM2-208ENST00000476594 RAD51AP1Q96B01 352 aa9.9□□□□□ -0.82
CCM2-208ENST00000476594 ZNF669Q96BR6 464 aaPredicted RBP9.9□□□□□ -0.82
CCM2-208ENST00000476594 TCTN2Q96GX1 697 aa9.9□□□□□ -0.82
CCM2-208ENST00000476594 PDLIM2Q96JY6 352 aa9.9□□□□□ -0.82
CCM2-208ENST00000476594 SERPINB12Q96P63 405 aa9.9□□□□□ -0.82
CCM2-208ENST00000476594 BBC3Q96PG8 261 aaPredicted RBP9.9□□□□□ -0.82
CCM2-208ENST00000476594 FAM167BQ9BTA0 163 aa9.9□□□□□ -0.82
CCM2-208ENST00000476594 GPR87Q9BY21 358 aa9.9□□□□□ -0.82
CCM2-208ENST00000476594 PITPNM3Q9BZ71 974 aa9.9□□□□□ -0.82
CCM2-208ENST00000476594 P2RY12Q9H244 342 aa9.9□□□□□ -0.82
CCM2-208ENST00000476594 ADNPQ9H2P0 1102 aa9.9□□□□□ -0.82
CCM2-208ENST00000476594 KCNF1Q9H3M0 494 aa9.9□□□□□ -0.82
CCM2-208ENST00000476594 LHX9Q9NQ69 397 aa9.9□□□□□ -0.82
CCM2-208ENST00000476594 HEMK1Q9Y5R4 338 aaPredicted RBP9.9□□□□□ -0.82
CCM2-208ENST00000476594 SAR1BQ9Y6B6 198 aa9.9□□□□□ -0.82
CCM2-208ENST00000476594 COMMD10Q9Y6G5 202 aa9.9□□□□□ -0.82
CCM2-208ENST00000476594 MGAQ8IWI9 3026 aa9.89□□□□□ -0.83
CCM2-208ENST00000476594 A0A0J9YY10 115 aa9.89□□□□□ -0.83
CCM2-208ENST00000476594 TCRBV7S3A2A0A539 114 aa9.89□□□□□ -0.83
CCM2-208ENST00000476594 ZNF839A8K0R7 811 aa9.89□□□□□ -0.83
CCM2-208ENST00000476594 TMEM150CB9EJG8 249 aa9.89□□□□□ -0.83
CCM2-208ENST00000476594 E7EQ34 232 aa9.89□□□□□ -0.83
CCM2-208ENST00000476594 GOLGA8MH3BSY2 632 aa9.89□□□□□ -0.83
CCM2-208ENST00000476594 CCDC188H7C350 402 aa9.89□□□□□ -0.83
CCM2-208ENST00000476594 BTN3A3O00478 584 aa9.89□□□□□ -0.83
CCM2-208ENST00000476594 KATNA1O75449 491 aa9.89□□□□□ -0.83
CCM2-208ENST00000476594 TMEM63AO94886 807 aa9.89□□□□□ -0.83
CCM2-208ENST00000476594 SLCO2B1O94956 709 aa9.89□□□□□ -0.83
CCM2-208ENST00000476594 TTC4O95801 387 aa9.89□□□□□ -0.83
CCM2-208ENST00000476594 S1PR4O95977 384 aa9.89□□□□□ -0.83
CCM2-208ENST00000476594 RECKO95980 971 aa9.89□□□□□ -0.83
CCM2-208ENST00000476594 CHRM5P08912 532 aaPredicted RBP9.89□□□□□ -0.83
CCM2-208ENST00000476594 CD63P08962 238 aa9.89□□□□□ -0.83
CCM2-208ENST00000476594 CHRM3P20309 590 aa9.89□□□□□ -0.83
CCM2-208ENST00000476594 AOAHP28039 575 aa9.89□□□□□ -0.83
CCM2-208ENST00000476594 ATP5DP30049 168 aa9.89□□□□□ -0.83
CCM2-208ENST00000476594 ITGA1P56199 1179 aa9.89□□□□□ -0.83
CCM2-208ENST00000476594 CDC20Q12834 499 aa9.89□□□□□ -0.83
CCM2-208ENST00000476594 DNASE1L3Q13609 305 aa9.89□□□□□ -0.83
CCM2-208ENST00000476594 PTK6Q13882 451 aa9.89□□□□□ -0.83
CCM2-208ENST00000476594 SEMA3AQ14563 771 aa9.89□□□□□ -0.83
CCM2-208ENST00000476594 KCNAB1Q14722 419 aa9.89□□□□□ -0.83
CCM2-208ENST00000476594 LONRF1Q17RB8 773 aa9.89□□□□□ -0.83
CCM2-208ENST00000476594 SLC5A12Q1EHB4 618 aa9.89□□□□□ -0.83
CCM2-208ENST00000476594 ZNF470Q6ECI4 717 aa9.89□□□□□ -0.83
CCM2-208ENST00000476594 PWWP2BQ6NUJ5 590 aa9.89□□□□□ -0.83
CCM2-208ENST00000476594 NEPROQ6NW34 567 aa9.89□□□□□ -0.83
CCM2-208ENST00000476594 UNC5AQ6ZN44 842 aa9.89□□□□□ -0.83
CCM2-208ENST00000476594 TIPARPQ7Z3E1 657 aaKnown RBP9.89□□□□□ -0.83
CCM2-208ENST00000476594 LDB1Q86U70 411 aaPredicted RBP9.89□□□□□ -0.83
CCM2-208ENST00000476594 ADGRF3Q8IZF5 1079 aa9.89□□□□□ -0.83
CCM2-208ENST00000476594 C19orf47Q8N9M1 422 aaKnown RBP9.89□□□□□ -0.83
CCM2-208ENST00000476594 CFAP61Q8NHU2 1237 aa9.89□□□□□ -0.83
CCM2-208ENST00000476594 EXTL1Q92935 676 aa9.89□□□□□ -0.83
CCM2-208ENST00000476594 SLCO2A1Q92959 643 aa9.89□□□□□ -0.83
CCM2-208ENST00000476594 ZNF501Q96CX3 271 aaPredicted RBP9.89□□□□□ -0.83
CCM2-208ENST00000476594 CLIP3Q96DZ5 547 aa9.89□□□□□ -0.83
CCM2-208ENST00000476594 LRFN5Q96NI6 719 aa9.89□□□□□ -0.83
CCM2-208ENST00000476594 TRAPPC9Q96Q05 1148 aa9.89□□□□□ -0.83
CCM2-208ENST00000476594 DPH2Q9BQC3 489 aaPredicted RBP9.89□□□□□ -0.83
CCM2-208ENST00000476594 SLC12A9Q9BXP2 914 aa9.89□□□□□ -0.83
CCM2-208ENST00000476594 CHRNA10Q9GZZ6 450 aa9.89□□□□□ -0.83
CCM2-208ENST00000476594 XKR8Q9H6D3 395 aa9.89□□□□□ -0.83
CCM2-208ENST00000476594 FAM114A2Q9NRY5 505 aa9.89□□□□□ -0.83
CCM2-208ENST00000476594 IRAK4Q9NWZ3 460 aa9.89□□□□□ -0.83
CCM2-208ENST00000476594 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.89□□□□□ -0.83
CCM2-208ENST00000476594 MARCH4Q9P2E8 410 aaPredicted RBP9.89□□□□□ -0.83
CCM2-208ENST00000476594 PCYOX1Q9UHG3 505 aa9.89□□□□□ -0.83
CCM2-208ENST00000476594 TUBD1Q9UJT1 453 aa9.89□□□□□ -0.83
CCM2-208ENST00000476594 CROTQ9UKG9 612 aa9.89□□□□□ -0.83
CCM2-208ENST00000476594 SRPK3Q9UPE1 567 aa9.89□□□□□ -0.83
CCM2-208ENST00000476594 ICKQ9UPZ9 632 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms