RNA–Protein interactions for RNA: ENST00000466613.2

SDHB-203, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-203ENST00000466613 DNAJC21Q5F1R6 531 aaKnown RBP16.11■□□□□ 0.17
SDHB-203ENST00000466613 TTC27Q6P3X3 843 aa16.11■□□□□ 0.17
SDHB-203ENST00000466613 FAM199XQ6PEV8 388 aaPredicted RBP16.11■□□□□ 0.17
SDHB-203ENST00000466613 PRICKLE2Q7Z3G6 844 aa16.11■□□□□ 0.17
SDHB-203ENST00000466613 HOOK3Q86VS8 718 aa16.11■□□□□ 0.17
SDHB-203ENST00000466613 OR1L3Q8NH93 324 aa16.11■□□□□ 0.17
SDHB-203ENST00000466613 APOBEC4Q8WW27 367 aaKnown RBP16.11■□□□□ 0.17
SDHB-203ENST00000466613 CPT1BQ92523 772 aa16.11■□□□□ 0.17
SDHB-203ENST00000466613 MFSD3Q96ES6 412 aa16.11■□□□□ 0.17
SDHB-203ENST00000466613 LRFN5Q96NI6 719 aa16.11■□□□□ 0.17
SDHB-203ENST00000466613 GPR87Q9BY21 358 aa16.11■□□□□ 0.17
SDHB-203ENST00000466613 KLHL25Q9H0H3 589 aa16.11■□□□□ 0.17
SDHB-203ENST00000466613 GNPTGQ9UJJ9 305 aa16.11■□□□□ 0.17
SDHB-203ENST00000466613 KRT14P02533 472 aa16.1■□□□□ 0.17
SDHB-203ENST00000466613 APOA4P06727 396 aa16.1■□□□□ 0.17
SDHB-203ENST00000466613 CHRM5P08912 532 aaPredicted RBP16.1■□□□□ 0.17
SDHB-203ENST00000466613 FURINP09958 794 aa16.1■□□□□ 0.17
SDHB-203ENST00000466613 RPS3P23396 243 aaKnown RBP eCLIP16.1■□□□□ 0.179e-7■■■■□ 21.5
SDHB-203ENST00000466613 AOAHP28039 575 aa16.1■□□□□ 0.17
SDHB-203ENST00000466613 MAGEA6P43360 314 aa16.1■□□□□ 0.17
SDHB-203ENST00000466613 VPS41P49754 854 aa16.1■□□□□ 0.17
SDHB-203ENST00000466613 TERF1P54274 439 aa16.1■□□□□ 0.17
SDHB-203ENST00000466613 SARNPP82979 210 aaKnown RBP16.1■□□□□ 0.17
SDHB-203ENST00000466613 NFKB2Q00653 900 aa16.1■□□□□ 0.17
SDHB-203ENST00000466613 GPS1Q13098 491 aa16.1■□□□□ 0.17
SDHB-203ENST00000466613 TMED2Q15363 201 aa16.1■□□□□ 0.17
SDHB-203ENST00000466613 ZNF789Q5FWF6 425 aa16.1■□□□□ 0.17
SDHB-203ENST00000466613 PRAMEF17Q5VTA0 474 aa16.1■□□□□ 0.17
SDHB-203ENST00000466613 ZNF517Q6ZMY9 492 aaPredicted RBP16.1■□□□□ 0.17
SDHB-203ENST00000466613 CDHR3Q6ZTQ4 885 aa16.1■□□□□ 0.17
SDHB-203ENST00000466613 LRRC6Q86X45 466 aa16.1■□□□□ 0.17
SDHB-203ENST00000466613 VRK3Q8IV63 474 aa16.1■□□□□ 0.17
SDHB-203ENST00000466613 KRT222Q8N1A0 295 aa16.1■□□□□ 0.17
SDHB-203ENST00000466613 C19orf47Q8N9M1 422 aaKnown RBP16.1■□□□□ 0.17
SDHB-203ENST00000466613 SLC38A9Q8NBW4 561 aa16.1■□□□□ 0.17
SDHB-203ENST00000466613 FLVCR1-AS1Q8TAF5 88 aa16.1■□□□□ 0.17
SDHB-203ENST00000466613 SEC14L1Q92503 715 aa16.1■□□□□ 0.17
SDHB-203ENST00000466613 MR1Q95460 341 aa16.1■□□□□ 0.17
SDHB-203ENST00000466613 MAGOHBQ96A72 148 aaKnown RBP16.1■□□□□ 0.17
SDHB-203ENST00000466613 MS4A14Q96JA4 679 aa16.1■□□□□ 0.17
SDHB-203ENST00000466613 PANX3Q96QZ0 392 aa16.1■□□□□ 0.17
SDHB-203ENST00000466613 OR2A14Q96R47 310 aa16.1■□□□□ 0.17
SDHB-203ENST00000466613 RUFY1Q96T51 708 aa16.1■□□□□ 0.17
SDHB-203ENST00000466613 TWSG1Q9GZX9 223 aa16.1■□□□□ 0.17
SDHB-203ENST00000466613 P2RY12Q9H244 342 aa16.1■□□□□ 0.17
SDHB-203ENST00000466613 ACTL8Q9H568 366 aa16.1■□□□□ 0.17
SDHB-203ENST00000466613 GRPEL1Q9HAV7 217 aa16.1■□□□□ 0.17
SDHB-203ENST00000466613 SPHK1Q9NYA1 384 aa16.1■□□□□ 0.17
SDHB-203ENST00000466613 PLAGL1Q9UM63 463 aa16.1■□□□□ 0.17
SDHB-203ENST00000466613 SOX13Q9UN79 622 aa16.1■□□□□ 0.17
SDHB-203ENST00000466613 POLHQ9Y253 713 aa16.1■□□□□ 0.17
SDHB-203ENST00000466613 A0A0J9YY10 115 aa16.09■□□□□ 0.17
SDHB-203ENST00000466613 CDC14CA4D256 554 aa16.09■□□□□ 0.17
SDHB-203ENST00000466613 NDUFS3O75489 264 aa16.09■□□□□ 0.17
SDHB-203ENST00000466613 VAPBO95292 243 aa16.09■□□□□ 0.17
SDHB-203ENST00000466613 RPN2P04844 631 aa16.09■□□□□ 0.17
SDHB-203ENST00000466613 KLK3P07288 261 aaPredicted RBP16.09■□□□□ 0.17
SDHB-203ENST00000466613 ARNTP27540 789 aa16.09■□□□□ 0.17
SDHB-203ENST00000466613 PTPN4P29074 926 aa16.09■□□□□ 0.17
SDHB-203ENST00000466613 PKLRP30613 574 aa16.09■□□□□ 0.17
SDHB-203ENST00000466613 RAB28P51157 221 aa16.09■□□□□ 0.17
SDHB-203ENST00000466613 RPS15P62841 145 aaKnown RBP16.09■□□□□ 0.17
SDHB-203ENST00000466613 CYP1B1Q16678 543 aa16.09■□□□□ 0.17
SDHB-203ENST00000466613 KYNUQ16719 465 aa16.09■□□□□ 0.17
SDHB-203ENST00000466613 IZUMO3Q5VZ72 239 aa16.09■□□□□ 0.17
SDHB-203ENST00000466613 ARMC3Q5W041 872 aa16.09■□□□□ 0.17
SDHB-203ENST00000466613 PTRHD1Q6GMV3 140 aaKnown RBP16.09■□□□□ 0.17
SDHB-203ENST00000466613 CES3Q6UWW8 571 aa16.09■□□□□ 0.17
SDHB-203ENST00000466613 UNC5DQ6UXZ4 953 aa16.09■□□□□ 0.17
SDHB-203ENST00000466613 TRIM73Q86UV7 250 aa16.09■□□□□ 0.17
SDHB-203ENST00000466613 DSELQ8IZU8 1212 aa16.09■□□□□ 0.17
SDHB-203ENST00000466613 OTUD6BQ8N6M0 293 aa16.09■□□□□ 0.17
SDHB-203ENST00000466613 NAP1L3Q99457 506 aaPredicted RBP16.09■□□□□ 0.17
SDHB-203ENST00000466613 SERTAD3Q9UJW9 196 aa16.09■□□□□ 0.17
SDHB-203ENST00000466613 KCNMB2Q9Y691 235 aa16.09■□□□□ 0.17
SDHB-203ENST00000466613 FER1L5A0AVI2 2057 aa16.09■□□□□ 0.17
SDHB-203ENST00000466613 E7EQ34 232 aa16.08■□□□□ 0.16
SDHB-203ENST00000466613 MEN1O00255 615 aa16.08■□□□□ 0.16
SDHB-203ENST00000466613 PGRMC1O00264 195 aaKnown RBP16.08■□□□□ 0.16
SDHB-203ENST00000466613 SUV39H1O43463 412 aa16.08■□□□□ 0.16
SDHB-203ENST00000466613 AVILO75366 819 aa16.08■□□□□ 0.16
SDHB-203ENST00000466613 TMEM63AO94886 807 aa16.08■□□□□ 0.16
SDHB-203ENST00000466613 SLCO2B1O94956 709 aa16.08■□□□□ 0.16
SDHB-203ENST00000466613 CYP2A7P20853 494 aa16.08■□□□□ 0.16
SDHB-203ENST00000466613 PEBP1P30086 187 aaKnown RBP16.08■□□□□ 0.16
SDHB-203ENST00000466613 RORAP35398 523 aa16.08■□□□□ 0.16
SDHB-203ENST00000466613 COILP38432 576 aaPredicted RBP16.08■□□□□ 0.16
SDHB-203ENST00000466613 EIF3BP55884 814 aaKnown RBP16.08■□□□□ 0.16
SDHB-203ENST00000466613 ITGA1P56199 1179 aa16.08■□□□□ 0.16
SDHB-203ENST00000466613 RPS18P62269 152 aaKnown RBP16.08■□□□□ 0.16
SDHB-203ENST00000466613 KIR2DS3Q14952 304 aa16.08■□□□□ 0.16
SDHB-203ENST00000466613 PLEKHS1Q5SXH7 462 aa16.08■□□□□ 0.16
SDHB-203ENST00000466613 ANKRD22Q5VYY1 191 aa16.08■□□□□ 0.16
SDHB-203ENST00000466613 KIAA0930Q6ICG6 404 aaPredicted RBP16.08■□□□□ 0.16
SDHB-203ENST00000466613 MRNIPQ6NTE8 343 aa16.08■□□□□ 0.16
SDHB-203ENST00000466613 CCDC137Q6PK04 289 aaKnown RBP16.08■□□□□ 0.16
SDHB-203ENST00000466613 SYVN1Q86TM6 617 aa16.08■□□□□ 0.16
SDHB-203ENST00000466613 DCUN1D3Q8IWE4 304 aa16.08■□□□□ 0.16
SDHB-203ENST00000466613 REXO1L1PQ8IX06 675 aa16.08■□□□□ 0.16
SDHB-203ENST00000466613 CFAP61Q8NHU2 1237 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms