RNA–Protein interactions for RNA: ENST00000462125.5

C9orf3-210, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-210ENST00000462125 ZNF789Q5FWF6 425 aa12.8□□□□□ -0.36
C9orf3-210ENST00000462125 LDB1Q86U70 411 aaPredicted RBP12.8□□□□□ -0.36
C9orf3-210ENST00000462125 LRRC6Q86X45 466 aa12.8□□□□□ -0.36
C9orf3-210ENST00000462125 SLC38A9Q8NBW4 561 aa12.8□□□□□ -0.36
C9orf3-210ENST00000462125 FLVCR1-AS1Q8TAF5 88 aa12.8□□□□□ -0.36
C9orf3-210ENST00000462125 MAGOHBQ96A72 148 aaKnown RBP12.8□□□□□ -0.36
C9orf3-210ENST00000462125 MFSD3Q96ES6 412 aa12.8□□□□□ -0.36
C9orf3-210ENST00000462125 MS4A14Q96JA4 679 aa12.8□□□□□ -0.36
C9orf3-210ENST00000462125 TSSK1BQ9BXA7 367 aa12.8□□□□□ -0.36
C9orf3-210ENST00000462125 GPR87Q9BY21 358 aa12.8□□□□□ -0.36
C9orf3-210ENST00000462125 CHRNA10Q9GZZ6 450 aa12.8□□□□□ -0.36
C9orf3-210ENST00000462125 SLC25A18Q9H1K4 315 aa12.8□□□□□ -0.36
C9orf3-210ENST00000462125 SOX13Q9UN79 622 aa12.8□□□□□ -0.36
C9orf3-210ENST00000462125 PCDHB3Q9Y5E6 796 aa12.8□□□□□ -0.36
C9orf3-210ENST00000462125 MRPS18BQ9Y676 258 aaKnown RBP12.8□□□□□ -0.36
C9orf3-210ENST00000462125 BOD1L1Q8NFC6 3051 aa12.8□□□□□ -0.36
C9orf3-210ENST00000462125 MAGEB16A2A368 324 aa12.79□□□□□ -0.36
C9orf3-210ENST00000462125 PIPSLA2A3N6 862 aa12.79□□□□□ -0.36
C9orf3-210ENST00000462125 IQCF5A8MTL0 148 aa12.79□□□□□ -0.36
C9orf3-210ENST00000462125 CPNE3O75131 537 aaKnown RBP12.79□□□□□ -0.36
C9orf3-210ENST00000462125 CREG1O75629 220 aa12.79□□□□□ -0.36
C9orf3-210ENST00000462125 SCRG1O75711 98 aa12.79□□□□□ -0.36
C9orf3-210ENST00000462125 KRT14P02533 472 aa12.79□□□□□ -0.36
C9orf3-210ENST00000462125 RPS3P23396 243 aaKnown RBP eCLIP12.79□□□□□ -0.36
C9orf3-210ENST00000462125 COILP38432 576 aaPredicted RBP12.79□□□□□ -0.36
C9orf3-210ENST00000462125 POLE2P56282 527 aa12.79□□□□□ -0.36
C9orf3-210ENST00000462125 SARNPP82979 210 aaKnown RBP12.79□□□□□ -0.36
C9orf3-210ENST00000462125 HSPA14Q0VDF9 509 aa12.79□□□□□ -0.36
C9orf3-210ENST00000462125 DNASE1L3Q13609 305 aa12.79□□□□□ -0.36
C9orf3-210ENST00000462125 TRIP13Q15645 432 aaPredicted RBP12.79□□□□□ -0.36
C9orf3-210ENST00000462125 SYTL3Q4VX76 610 aa12.79□□□□□ -0.36
C9orf3-210ENST00000462125 PLEKHS1Q5SXH7 462 aa12.79□□□□□ -0.36
C9orf3-210ENST00000462125 CAND1Q86VP6 1230 aaKnown RBP12.79□□□□□ -0.36
C9orf3-210ENST00000462125 VRK3Q8IV63 474 aa12.79□□□□□ -0.36
C9orf3-210ENST00000462125 MCUQ8NE86 351 aa12.79□□□□□ -0.36
C9orf3-210ENST00000462125 LKAAEAR1Q8TD35 194 aa12.79□□□□□ -0.36
C9orf3-210ENST00000462125 ACTRT1Q8TDG2 376 aa12.79□□□□□ -0.36
C9orf3-210ENST00000462125 CT55Q8WUE5 264 aa12.79□□□□□ -0.36
C9orf3-210ENST00000462125 APOBEC4Q8WW27 367 aaKnown RBP12.79□□□□□ -0.36
C9orf3-210ENST00000462125 RNF31Q96EP0 1072 aa12.79□□□□□ -0.36
C9orf3-210ENST00000462125 OR2A14Q96R47 310 aa12.79□□□□□ -0.36
C9orf3-210ENST00000462125 TCF12Q99081 682 aa12.79□□□□□ -0.36
C9orf3-210ENST00000462125 NAP1L3Q99457 506 aaPredicted RBP12.79□□□□□ -0.36
C9orf3-210ENST00000462125 MENTQ9BUN1 341 aa12.79□□□□□ -0.36
C9orf3-210ENST00000462125 L2HGDHQ9H9P8 463 aa12.79□□□□□ -0.36
C9orf3-210ENST00000462125 SOHLH2Q9NX45 425 aa12.79□□□□□ -0.36
C9orf3-210ENST00000462125 SYBUQ9NX95 663 aa12.79□□□□□ -0.36
C9orf3-210ENST00000462125 SERTAD3Q9UJW9 196 aa12.79□□□□□ -0.36
C9orf3-210ENST00000462125 ZNF462Q96JM2 2506 aa12.78□□□□□ -0.36
C9orf3-210ENST00000462125 KPNA5O15131 536 aa12.78□□□□□ -0.36
C9orf3-210ENST00000462125 MAP3K7O43318 606 aa12.78□□□□□ -0.36
C9orf3-210ENST00000462125 KDM1AO60341 852 aa12.78□□□□□ -0.36
C9orf3-210ENST00000462125 AVILO75366 819 aa12.78□□□□□ -0.36
C9orf3-210ENST00000462125 KATNA1O75449 491 aa12.78□□□□□ -0.36
C9orf3-210ENST00000462125 VAPBO95292 243 aa12.78□□□□□ -0.36
C9orf3-210ENST00000462125 APOA4P06727 396 aa12.78□□□□□ -0.36
C9orf3-210ENST00000462125 CHRM5P08912 532 aaPredicted RBP12.78□□□□□ -0.36
C9orf3-210ENST00000462125 FURINP09958 794 aa12.78□□□□□ -0.36
C9orf3-210ENST00000462125 PRKAR1AP10644 381 aa12.78□□□□□ -0.36
C9orf3-210ENST00000462125 MLNP12872 115 aa12.78□□□□□ -0.36
C9orf3-210ENST00000462125 ADARP55265 1226 aaKnown RBP12.78□□□□□ -0.36
C9orf3-210ENST00000462125 NFATC3Q12968 1075 aa12.78□□□□□ -0.36
C9orf3-210ENST00000462125 GPS1Q13098 491 aa12.78□□□□□ -0.36
C9orf3-210ENST00000462125 GPS2Q13227 327 aa12.78□□□□□ -0.36
C9orf3-210ENST00000462125 GRB7Q14451 532 aa12.78□□□□□ -0.36
C9orf3-210ENST00000462125 KYNUQ16719 465 aa12.78□□□□□ -0.36
C9orf3-210ENST00000462125 KCTD19Q17RG1 926 aaPredicted RBP12.78□□□□□ -0.36
C9orf3-210ENST00000462125 IZUMO3Q5VZ72 239 aa12.78□□□□□ -0.36
C9orf3-210ENST00000462125 C16orf46Q6P387 395 aa12.78□□□□□ -0.36
C9orf3-210ENST00000462125 FAM199XQ6PEV8 388 aaPredicted RBP12.78□□□□□ -0.36
C9orf3-210ENST00000462125 SPESP1Q6UW49 350 aa12.78□□□□□ -0.36
C9orf3-210ENST00000462125 UNC5DQ6UXZ4 953 aa12.78□□□□□ -0.36
C9orf3-210ENST00000462125 CDHR3Q6ZTQ4 885 aa12.78□□□□□ -0.36
C9orf3-210ENST00000462125 TMEM126BQ8IUX1 230 aa12.78□□□□□ -0.36
C9orf3-210ENST00000462125 KRT222Q8N1A0 295 aa12.78□□□□□ -0.36
C9orf3-210ENST00000462125 OR1L3Q8NH93 324 aa12.78□□□□□ -0.36
C9orf3-210ENST00000462125 CPT1BQ92523 772 aa12.78□□□□□ -0.36
C9orf3-210ENST00000462125 TCTN2Q96GX1 697 aa12.78□□□□□ -0.36
C9orf3-210ENST00000462125 BIRC8Q96P09 236 aa12.78□□□□□ -0.36
C9orf3-210ENST00000462125 PANX3Q96QZ0 392 aa12.78□□□□□ -0.36
C9orf3-210ENST00000462125 FANCEQ9HB96 536 aa12.78□□□□□ -0.36
C9orf3-210ENST00000462125 SPHK1Q9NYA1 384 aa12.78□□□□□ -0.36
C9orf3-210ENST00000462125 TDRKHQ9Y2W6 561 aaKnown RBP12.78□□□□□ -0.36
C9orf3-210ENST00000462125 KCNMB2Q9Y691 235 aa12.78□□□□□ -0.36
C9orf3-210ENST00000462125 H3BMH7 237 aa12.77□□□□□ -0.37
C9orf3-210ENST00000462125 MEN1O00255 615 aa12.77□□□□□ -0.37
C9orf3-210ENST00000462125 CES2O00748 559 aa12.77□□□□□ -0.37
C9orf3-210ENST00000462125 CTIFO43310 598 aaKnown RBP12.77□□□□□ -0.37
C9orf3-210ENST00000462125 SUV39H1O43463 412 aa12.77□□□□□ -0.37
C9orf3-210ENST00000462125 NDUFS3O75489 264 aa12.77□□□□□ -0.37
C9orf3-210ENST00000462125 SLU7O95391 586 aaKnown RBP12.77□□□□□ -0.37
C9orf3-210ENST00000462125 KLK3P07288 261 aaPredicted RBP12.77□□□□□ -0.37
C9orf3-210ENST00000462125 PVRP15151 417 aa12.77□□□□□ -0.37
C9orf3-210ENST00000462125 UGT2B7P16662 529 aa12.77□□□□□ -0.37
C9orf3-210ENST00000462125 PTPN4P29074 926 aa12.77□□□□□ -0.37
C9orf3-210ENST00000462125 RORAP35398 523 aa12.77□□□□□ -0.37
C9orf3-210ENST00000462125 GABRA4P48169 554 aa12.77□□□□□ -0.37
C9orf3-210ENST00000462125 RAB28P51157 221 aa12.77□□□□□ -0.37
C9orf3-210ENST00000462125 ABRQ12979 859 aa12.77□□□□□ -0.37
C9orf3-210ENST00000462125 KCNAB2Q13303 367 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms