RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 ARMCX6Q7L4S7 300 aa8.51□□□□□ -1.05
RIF1-208ENST00000457745 ADAMTSL2Q86TH1 951 aa8.51□□□□□ -1.05
RIF1-208ENST00000457745 TREML1Q86YW5 311 aa8.51□□□□□ -1.05
RIF1-208ENST00000457745 TRIM42Q8IWZ5 723 aa8.51□□□□□ -1.05
RIF1-208ENST00000457745 CACNA2D3Q8IZS8 1091 aa8.51□□□□□ -1.05
RIF1-208ENST00000457745 RNF175Q8N4F7 328 aa8.51□□□□□ -1.05
RIF1-208ENST00000457745 FITM2Q8N6M3 262 aa8.51□□□□□ -1.05
RIF1-208ENST00000457745 TEX9Q8N6V9 391 aa8.51□□□□□ -1.05
RIF1-208ENST00000457745 TMEM105Q8N8V8 129 aa8.51□□□□□ -1.05
RIF1-208ENST00000457745 CCDC197Q8NCU1 140 aa8.51□□□□□ -1.05
RIF1-208ENST00000457745 DENND6BQ8NEG7 585 aa8.51□□□□□ -1.05
RIF1-208ENST00000457745 OR2T11Q8NH01 316 aa8.51□□□□□ -1.05
RIF1-208ENST00000457745 C1orf216Q8TAB5 229 aa8.51□□□□□ -1.05
RIF1-208ENST00000457745 HMGCLL1Q8TB92 370 aa8.51□□□□□ -1.05
RIF1-208ENST00000457745 HM13Q8TCT9 377 aa8.51□□□□□ -1.05
RIF1-208ENST00000457745 SKA2Q8WVK7 121 aaPredicted RBP8.51□□□□□ -1.05
RIF1-208ENST00000457745 PATE1Q8WXA2 126 aa8.51□□□□□ -1.05
RIF1-208ENST00000457745 SNX19Q92543 992 aa8.51□□□□□ -1.05
RIF1-208ENST00000457745 SKA1Q96BD8 255 aa8.51□□□□□ -1.05
RIF1-208ENST00000457745 SHDQ96IW2 340 aa8.51□□□□□ -1.05
RIF1-208ENST00000457745 MARK4Q96L34 752 aa8.51□□□□□ -1.05
RIF1-208ENST00000457745 MENTQ9BUN1 341 aa8.51□□□□□ -1.05
RIF1-208ENST00000457745 NUF2Q9BZD4 464 aa8.51□□□□□ -1.05
RIF1-208ENST00000457745 TMEM168Q9H0V1 697 aa8.51□□□□□ -1.05
RIF1-208ENST00000457745 MYLK2Q9H1R3 596 aa8.51□□□□□ -1.05
RIF1-208ENST00000457745 SPNS1Q9H2V7 528 aa8.51□□□□□ -1.05
RIF1-208ENST00000457745 KDM4CQ9H3R0 1056 aa8.51□□□□□ -1.05
RIF1-208ENST00000457745 PRDM8Q9NQV8 689 aa8.51□□□□□ -1.05
RIF1-208ENST00000457745 STOX2Q9P2F5 926 aaPredicted RBP8.51□□□□□ -1.05
RIF1-208ENST00000457745 ZNHIT2Q9UHR6 403 aa8.51□□□□□ -1.05
RIF1-208ENST00000457745 MOSPD1Q9UJG1 213 aa8.51□□□□□ -1.05
RIF1-208ENST00000457745 MID2Q9UJV3 735 aa8.51□□□□□ -1.05
RIF1-208ENST00000457745 BTRCQ9Y297 605 aa8.51□□□□□ -1.05
RIF1-208ENST00000457745 RAP2CQ9Y3L5 183 aa8.51□□□□□ -1.05
RIF1-208ENST00000457745 SIT1Q9Y3P8 196 aa8.51□□□□□ -1.05
RIF1-208ENST00000457745 TIMM22Q9Y584 194 aa8.51□□□□□ -1.05
RIF1-208ENST00000457745 SDK1Q7Z5N4 2213 aa8.51□□□□□ -1.05
RIF1-208ENST00000457745 THADAQ6YHU6 1953 aa8.51□□□□□ -1.05
RIF1-208ENST00000457745 ATXN2Q99700 1313 aaKnown RBP8.51□□□□□ -1.05
RIF1-208ENST00000457745 KNL1Q8NG31 2342 aa8.51□□□□□ -1.05
RIF1-208ENST00000457745 KCNE1BA0A087WTH5 132 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 A0A1W2PPC4 97 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 A6NCN8 305 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 OR52A4PA6NMU1 304 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 METTL12A8MUP2 240 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 EIF3FO00303 357 aaPredicted RBP8.5□□□□□ -1.05
RIF1-208ENST00000457745 FPGTO14772 594 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 LIN7AO14910 233 aaPredicted RBP8.5□□□□□ -1.05
RIF1-208ENST00000457745 NRP2O60462 931 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 CCNT2O60583 730 aaKnown RBP8.5□□□□□ -1.05
RIF1-208ENST00000457745 UBOX5O94941 541 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 TGDSO95455 350 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 VCLP18206 1134 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 CLCNKAP51800 687 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 CTBSQ01459 385 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 BNC1Q01954 994 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 SIGLEC14Q08ET2 396 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 ILF2Q12905 390 aaKnown RBP8.5□□□□□ -1.05
RIF1-208ENST00000457745 UBAP2LQ14157 1087 aaKnown RBP8.5□□□□□ -1.05
RIF1-208ENST00000457745 ZSCAN26Q16670 478 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 PTCHD3Q3KNS1 767 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 TUBB8Q3ZCM7 444 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 GKAP1Q5VSY0 366 aaPredicted RBP8.5□□□□□ -1.05
RIF1-208ENST00000457745 KANK2Q63ZY3 851 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 METRNLQ641Q3 311 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 CAPRIN2Q6IMN6 1127 aaKnown RBP8.5□□□□□ -1.05
RIF1-208ENST00000457745 EPGNQ6UW88 154 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 NEK10Q6ZWH5 1172 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 RD3Q7Z3Z2 195 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 PDZD3Q86UT5 571 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 AMZ2Q86W34 360 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 CRLF3Q8IUI8 442 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 SLC22A9Q8IVM8 553 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 TMEFF1Q8IYR6 380 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 KMT2EQ8IZD2 1858 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 C2orf73Q8N5S3 287 aaPredicted RBP8.5□□□□□ -1.05
RIF1-208ENST00000457745 OR56A4Q8NGH8 313 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 PIWIL2Q8TC59 973 aaKnown RBP8.5□□□□□ -1.05
RIF1-208ENST00000457745 NUDT8Q8WV74 236 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 ASZ1Q8WWH4 475 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 CCT6BQ92526 530 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 EDAQ92838 391 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 TMEM159Q96B96 161 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 CNDP1Q96KN2 507 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 WDR92Q96MX6 357 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 OR2M4Q96R27 311 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 HBEGFQ99075 208 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 EGFL8Q99944 293 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 ZCCHC2Q9C0B9 1178 aaKnown RBP8.5□□□□□ -1.05
RIF1-208ENST00000457745 NMUR2Q9GZQ4 415 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 NSRP1Q9H0G5 558 aaKnown RBP8.5□□□□□ -1.05
RIF1-208ENST00000457745 ZNF385DQ9H6B1 395 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 XKR8Q9H6D3 395 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 NOL11Q9H8H0 719 aaKnown RBP8.5□□□□□ -1.05
RIF1-208ENST00000457745 SYNPO2LQ9H987 977 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 CARS2Q9HA77 564 aaKnown RBP8.5□□□□□ -1.05
RIF1-208ENST00000457745 RDH14Q9HBH5 336 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 PARVBQ9HBI1 364 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 MID1IP1Q9NPA3 183 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms