RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 SERTAD3Q9UJW9 196 aa17.3■□□□□ 0.36
MSH6-207ENST00000456246 SOX13Q9UN79 622 aa17.3■□□□□ 0.36
MSH6-207ENST00000456246 POLHQ9Y253 713 aa17.3■□□□□ 0.36
MSH6-207ENST00000456246 TDRKHQ9Y2W6 561 aaKnown RBP17.3■□□□□ 0.36
MSH6-207ENST00000456246 BOD1L1Q8NFC6 3051 aa17.29■□□□□ 0.36
MSH6-207ENST00000456246 PGRMC1O00264 195 aaKnown RBP17.29■□□□□ 0.36
MSH6-207ENST00000456246 CREG1O75629 220 aa17.29■□□□□ 0.36
MSH6-207ENST00000456246 SLCO2B1O94956 709 aa17.29■□□□□ 0.36
MSH6-207ENST00000456246 KRT14P02533 472 aa17.29■□□□□ 0.36
MSH6-207ENST00000456246 CHRM5P08912 532 aaPredicted RBP17.29■□□□□ 0.36
MSH6-207ENST00000456246 HBQ1P09105 142 aa17.29■□□□□ 0.36
MSH6-207ENST00000456246 MLNP12872 115 aa17.29■□□□□ 0.36
MSH6-207ENST00000456246 CYP2A7P20853 494 aa17.29■□□□□ 0.36
MSH6-207ENST00000456246 MGAT1P26572 445 aa17.29■□□□□ 0.36
MSH6-207ENST00000456246 GPS1Q13098 491 aa17.29■□□□□ 0.36
MSH6-207ENST00000456246 KCNJ11Q14654 390 aa17.29■□□□□ 0.36
MSH6-207ENST00000456246 KIR2DS3Q14952 304 aa17.29■□□□□ 0.36
MSH6-207ENST00000456246 CYP1B1Q16678 543 aa17.29■□□□□ 0.36
MSH6-207ENST00000456246 DEFB109BQ30KR1 87 aa17.29■□□□□ 0.36
MSH6-207ENST00000456246 DCUN1D3Q8IWE4 304 aa17.29■□□□□ 0.36
MSH6-207ENST00000456246 OTUD6BQ8N6M0 293 aa17.29■□□□□ 0.36
MSH6-207ENST00000456246 C19orf47Q8N9M1 422 aaKnown RBP17.29■□□□□ 0.36
MSH6-207ENST00000456246 N4BP2L2Q92802 583 aaPredicted RBP17.29■□□□□ 0.36
MSH6-207ENST00000456246 SLC22A18Q96BI1 424 aa17.29■□□□□ 0.36
MSH6-207ENST00000456246 TCTN2Q96GX1 697 aa17.29■□□□□ 0.36
MSH6-207ENST00000456246 TCF12Q99081 682 aa17.29■□□□□ 0.36
MSH6-207ENST00000456246 TWSG1Q9GZX9 223 aa17.29■□□□□ 0.36
MSH6-207ENST00000456246 P2RY12Q9H244 342 aa17.29■□□□□ 0.36
MSH6-207ENST00000456246 SYBUQ9NX95 663 aa17.29■□□□□ 0.36
MSH6-207ENST00000456246 MARCH4Q9P2E8 410 aaPredicted RBP17.29■□□□□ 0.36
MSH6-207ENST00000456246 MRPS18BQ9Y676 258 aaKnown RBP17.29■□□□□ 0.36
MSH6-207ENST00000456246 GOLGA6L10A0A0M3HER8 536 aa17.28■□□□□ 0.36
MSH6-207ENST00000456246 TMEM150CB9EJG8 249 aa17.28■□□□□ 0.36
MSH6-207ENST00000456246 H3BMM5 538 aa17.28■□□□□ 0.36
MSH6-207ENST00000456246 SLC28A2O43868 658 aa17.28■□□□□ 0.36
MSH6-207ENST00000456246 UGT2B7P16662 529 aa17.28■□□□□ 0.36
MSH6-207ENST00000456246 AOAHP28039 575 aa17.28■□□□□ 0.36
MSH6-207ENST00000456246 NMBRP28336 390 aa17.28■□□□□ 0.36
MSH6-207ENST00000456246 PTPN4P29074 926 aa17.28■□□□□ 0.36
MSH6-207ENST00000456246 RAB28P51157 221 aa17.28■□□□□ 0.36
MSH6-207ENST00000456246 ITGA1P56199 1179 aa17.28■□□□□ 0.36
MSH6-207ENST00000456246 TYSND1Q2T9J0 566 aa17.28■□□□□ 0.36
MSH6-207ENST00000456246 IZUMO3Q5VZ72 239 aa17.28■□□□□ 0.36
MSH6-207ENST00000456246 KIAA0930Q6ICG6 404 aaPredicted RBP17.28■□□□□ 0.36
MSH6-207ENST00000456246 TTC23LQ6PF05 361 aa17.28■□□□□ 0.36
MSH6-207ENST00000456246 NAPRTQ6XQN6 538 aa17.28■□□□□ 0.36
MSH6-207ENST00000456246 ZNF517Q6ZMY9 492 aaPredicted RBP17.28■□□□□ 0.36
MSH6-207ENST00000456246 OTOAQ7RTW8 1153 aa17.28■□□□□ 0.36
MSH6-207ENST00000456246 SYVN1Q86TM6 617 aa17.28■□□□□ 0.36
MSH6-207ENST00000456246 GPR135Q8IZ08 494 aa17.28■□□□□ 0.36
MSH6-207ENST00000456246 GRK7Q8WTQ7 553 aa17.28■□□□□ 0.36
MSH6-207ENST00000456246 MR1Q95460 341 aa17.28■□□□□ 0.36
MSH6-207ENST00000456246 DPH2Q9BQC3 489 aaPredicted RBP17.28■□□□□ 0.36
MSH6-207ENST00000456246 RAB11FIP5Q9BXF6 653 aa17.28■□□□□ 0.36
MSH6-207ENST00000456246 ACTL8Q9H568 366 aa17.28■□□□□ 0.36
MSH6-207ENST00000456246 XAB2Q9HCS7 855 aaKnown RBP17.28■□□□□ 0.36
MSH6-207ENST00000456246 SAMD15Q9P1V8 674 aa17.28■□□□□ 0.36
MSH6-207ENST00000456246 CDYLQ9Y232 598 aa17.28■□□□□ 0.36
MSH6-207ENST00000456246 VPS9D1Q9Y2B5 631 aa17.28■□□□□ 0.36
MSH6-207ENST00000456246 A0A0J9YY10 115 aa17.27■□□□□ 0.36
MSH6-207ENST00000456246 MAGEB16A2A368 324 aa17.27■□□□□ 0.36
MSH6-207ENST00000456246 E7EQ34 232 aa17.27■□□□□ 0.36
MSH6-207ENST00000456246 MEN1O00255 615 aa17.27■□□□□ 0.36
MSH6-207ENST00000456246 CES2O00748 559 aa17.27■□□□□ 0.36
MSH6-207ENST00000456246 KIF5CO60282 957 aa17.27■□□□□ 0.36
MSH6-207ENST00000456246 VAPBO95292 243 aa17.27■□□□□ 0.36
MSH6-207ENST00000456246 COILP38432 576 aaPredicted RBP17.27■□□□□ 0.36
MSH6-207ENST00000456246 VPS41P49754 854 aa17.27■□□□□ 0.36
MSH6-207ENST00000456246 CSE1LP55060 971 aaKnown RBP17.27■□□□□ 0.36
MSH6-207ENST00000456246 ADARP55265 1226 aaKnown RBP17.27■□□□□ 0.36
MSH6-207ENST00000456246 ABRQ12979 859 aa17.27■□□□□ 0.36
MSH6-207ENST00000456246 GPS2Q13227 327 aa17.27■□□□□ 0.36
MSH6-207ENST00000456246 ERV3-1Q14264 604 aa17.27■□□□□ 0.36
MSH6-207ENST00000456246 TRIP13Q15645 432 aaPredicted RBP17.27■□□□□ 0.36
MSH6-207ENST00000456246 SLC5A12Q1EHB4 618 aa17.27■□□□□ 0.36
MSH6-207ENST00000456246 PLEKHS1Q5SXH7 462 aa17.27■□□□□ 0.36
MSH6-207ENST00000456246 CCDC137Q6PK04 289 aaKnown RBP17.27■□□□□ 0.36
MSH6-207ENST00000456246 ATG14Q6ZNE5 492 aa17.27■□□□□ 0.36
MSH6-207ENST00000456246 PRICKLE2Q7Z3G6 844 aa17.27■□□□□ 0.36
MSH6-207ENST00000456246 LDB1Q86U70 411 aaPredicted RBP17.27■□□□□ 0.36
MSH6-207ENST00000456246 DSELQ8IZU8 1212 aa17.27■□□□□ 0.36
MSH6-207ENST00000456246 RAB42Q8N4Z0 105 aa17.27■□□□□ 0.36
MSH6-207ENST00000456246 MCUQ8NE86 351 aa17.27■□□□□ 0.36
MSH6-207ENST00000456246 OR1L3Q8NH93 324 aa17.27■□□□□ 0.36
MSH6-207ENST00000456246 C9orf43Q8TAL5 461 aaPredicted RBP17.27■□□□□ 0.36
MSH6-207ENST00000456246 LKAAEAR1Q8TD35 194 aa17.27■□□□□ 0.36
MSH6-207ENST00000456246 THAP4Q8WY91 577 aa17.27■□□□□ 0.36
MSH6-207ENST00000456246 CLIP3Q96DZ5 547 aa17.27■□□□□ 0.36
MSH6-207ENST00000456246 RNF31Q96EP0 1072 aa17.27■□□□□ 0.36
MSH6-207ENST00000456246 MFSD3Q96ES6 412 aa17.27■□□□□ 0.36
MSH6-207ENST00000456246 OR2A14Q96R47 310 aa17.27■□□□□ 0.36
MSH6-207ENST00000456246 C17orf62Q9BQA9 187 aa17.27■□□□□ 0.36
MSH6-207ENST00000456246 SLC7A5P2Q9GIP4 190 aa17.27■□□□□ 0.36
MSH6-207ENST00000456246 ACTR5Q9H9F9 607 aaPredicted RBP17.27■□□□□ 0.36
MSH6-207ENST00000456246 KCNMB2Q9Y691 235 aa17.27■□□□□ 0.36
MSH6-207ENST00000456246 AP1M2Q9Y6Q5 423 aa17.27■□□□□ 0.36
MSH6-207ENST00000456246 TCRBV7S3A2A0A539 114 aa17.26■□□□□ 0.35
MSH6-207ENST00000456246 IQCF5A8MTL0 148 aa17.26■□□□□ 0.35
MSH6-207ENST00000456246 FKBP9O95302 570 aa17.26■□□□□ 0.35
MSH6-207ENST00000456246 ESR1P03372 595 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms