RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 HDAC2Q92769 488 aaKnown RBP10.4□□□□□ -0.75
TOP3B-210ENST00000444502 C1orf21Q9H246 121 aa10.4□□□□□ -0.75
TOP3B-210ENST00000444502 WBP1LQ9NX94 342 aa10.4□□□□□ -0.75
TOP3B-210ENST00000444502 OGDHLQ9ULD0 1010 aa10.4□□□□□ -0.75
TOP3B-210ENST00000444502 ERVW-1Q9UQF0 538 aa10.4□□□□□ -0.75
TOP3B-210ENST00000444502 TBC1D30Q9Y2I9 924 aa10.4□□□□□ -0.75
TOP3B-210ENST00000444502 NOX1Q9Y5S8 564 aa10.4□□□□□ -0.75
TOP3B-210ENST00000444502 ST14Q9Y5Y6 855 aa10.4□□□□□ -0.75
TOP3B-210ENST00000444502 CKMT2P17540 419 aa10.39□□□□□ -0.75
TOP3B-210ENST00000444502 CDH2P19022 906 aaPredicted RBP10.39□□□□□ -0.75
TOP3B-210ENST00000444502 PRKACBP22694 351 aa10.39□□□□□ -0.75
TOP3B-210ENST00000444502 RPL10P27635 214 aaKnown RBP10.39□□□□□ -0.75
TOP3B-210ENST00000444502 AGTR2P50052 363 aa10.39□□□□□ -0.75
TOP3B-210ENST00000444502 HERVK_113P63132 956 aa10.39□□□□□ -0.75
TOP3B-210ENST00000444502 SEMA3BQ13214 749 aa10.39□□□□□ -0.75
TOP3B-210ENST00000444502 DSC3Q14574 896 aa10.39□□□□□ -0.75
TOP3B-210ENST00000444502 SF1Q15637 639 aaKnown RBP10.39□□□□□ -0.75
TOP3B-210ENST00000444502 TECRLQ5HYJ1 363 aa10.39□□□□□ -0.75
TOP3B-210ENST00000444502 LRRC66Q68CR7 880 aa10.39□□□□□ -0.75
TOP3B-210ENST00000444502 AHI1Q8N157 1196 aa10.39□□□□□ -0.75
TOP3B-210ENST00000444502 CLIP4Q8N3C7 705 aa10.39□□□□□ -0.75
TOP3B-210ENST00000444502 NRBF2Q96F24 287 aa10.39□□□□□ -0.75
TOP3B-210ENST00000444502 TSSK3Q96PN8 268 aa10.39□□□□□ -0.75
TOP3B-210ENST00000444502 AARSD1Q9BTE6 412 aaKnown RBP10.39□□□□□ -0.75
TOP3B-210ENST00000444502 ERVK-6Q9BXR3 956 aa10.39□□□□□ -0.75
TOP3B-210ENST00000444502 IPPKQ9H8X2 491 aa10.39□□□□□ -0.75
TOP3B-210ENST00000444502 POLR1BQ9H9Y6 1135 aa10.39□□□□□ -0.75
TOP3B-210ENST00000444502 RAD18Q9NS91 495 aa10.39□□□□□ -0.75
TOP3B-210ENST00000444502 LEF1Q9UJU2 399 aaPredicted RBP10.39□□□□□ -0.75
TOP3B-210ENST00000444502 INVSQ9Y283 1065 aa10.39□□□□□ -0.75
TOP3B-210ENST00000444502 TTC3P53804 2025 aa10.39□□□□□ -0.75
TOP3B-210ENST00000444502 ERAL1O75616 437 aaKnown RBP10.39□□□□□ -0.75
TOP3B-210ENST00000444502 PAK4O96013 591 aaPredicted RBP10.39□□□□□ -0.75
TOP3B-210ENST00000444502 ACP5P13686 325 aa10.39□□□□□ -0.75
TOP3B-210ENST00000444502 ARSAP15289 507 aa10.39□□□□□ -0.75
TOP3B-210ENST00000444502 ATP6V1E1P36543 226 aa10.39□□□□□ -0.75
TOP3B-210ENST00000444502 VAC14Q08AM6 782 aa10.39□□□□□ -0.75
TOP3B-210ENST00000444502 TAF1AQ15573 450 aaPredicted RBP10.39□□□□□ -0.75
TOP3B-210ENST00000444502 KCTD11Q693B1 232 aa10.39□□□□□ -0.75
TOP3B-210ENST00000444502 DEPDC4Q8N2C3 294 aa10.39□□□□□ -0.75
TOP3B-210ENST00000444502 EEF1AKMT1Q8WVE0 214 aa10.39□□□□□ -0.75
TOP3B-210ENST00000444502 SLC22A12Q96S37 553 aa10.39□□□□□ -0.75
TOP3B-210ENST00000444502 ZBTB26Q9HCK0 441 aa10.39□□□□□ -0.75
TOP3B-210ENST00000444502 ELOVL2Q9NXB9 296 aa10.39□□□□□ -0.75
TOP3B-210ENST00000444502 B4GALT6Q9UBX8 382 aa10.39□□□□□ -0.75
TOP3B-210ENST00000444502 CAB39Q9Y376 341 aaPredicted RBP10.39□□□□□ -0.75
TOP3B-210ENST00000444502 NUMBLQ9Y6R0 609 aa10.39□□□□□ -0.75
TOP3B-210ENST00000444502 DGKBQ9Y6T7 804 aa10.39□□□□□ -0.75
TOP3B-210ENST00000444502 CAPN14A8MX76 684 aa10.39□□□□□ -0.75
TOP3B-210ENST00000444502 FUCA1P04066 466 aa10.39□□□□□ -0.75
TOP3B-210ENST00000444502 OGNP20774 298 aaKnown RBP10.39□□□□□ -0.75
TOP3B-210ENST00000444502 MAPK1P28482 360 aa10.39□□□□□ -0.75
TOP3B-210ENST00000444502 CD70P32970 193 aa10.39□□□□□ -0.75
TOP3B-210ENST00000444502 TGFBIQ15582 683 aa10.39□□□□□ -0.75
TOP3B-210ENST00000444502 NDUFA5Q16718 116 aa10.39□□□□□ -0.75
TOP3B-210ENST00000444502 IL23RQ5VWK5 629 aa10.39□□□□□ -0.75
TOP3B-210ENST00000444502 PRMT9Q6P2P2 845 aa10.39□□□□□ -0.75
TOP3B-210ENST00000444502 TAF8Q7Z7C8 310 aa10.39□□□□□ -0.75
TOP3B-210ENST00000444502 METTL25Q8N6Q8 603 aa10.39□□□□□ -0.75
TOP3B-210ENST00000444502 SLC43A3Q8NBI5 491 aa10.39□□□□□ -0.75
TOP3B-210ENST00000444502 EBF1Q9UH73 591 aa10.39□□□□□ -0.75
TOP3B-210ENST00000444502 WNT9AO14904 365 aa10.38□□□□□ -0.75
TOP3B-210ENST00000444502 KPNA5O15131 536 aa10.38□□□□□ -0.75
TOP3B-210ENST00000444502 ASNA1O43681 348 aa10.38□□□□□ -0.75
TOP3B-210ENST00000444502 VPS4BO75351 444 aa10.38□□□□□ -0.75
TOP3B-210ENST00000444502 LEFTY1O75610 366 aa10.38□□□□□ -0.75
TOP3B-210ENST00000444502 ATF6P18850 670 aa10.38□□□□□ -0.75
TOP3B-210ENST00000444502 CD72P21854 359 aa10.38□□□□□ -0.75
TOP3B-210ENST00000444502 LEPRP48357 1165 aaKnown RBP10.38□□□□□ -0.75
TOP3B-210ENST00000444502 STC1P52823 247 aa10.38□□□□□ -0.75
TOP3B-210ENST00000444502 RING1Q06587 406 aa10.38□□□□□ -0.75
TOP3B-210ENST00000444502 TNK2Q07912 1038 aa10.38□□□□□ -0.75
TOP3B-210ENST00000444502 DNASE1L3Q13609 305 aa10.38□□□□□ -0.75
TOP3B-210ENST00000444502 SF3B4Q15427 424 aaKnown RBP eCLIP10.38□□□□□ -0.754e-30■■■■■ 52.9
TOP3B-210ENST00000444502 GCNT7Q6ZNI0 430 aa10.38□□□□□ -0.75
TOP3B-210ENST00000444502 ZBTB2Q8N680 514 aa10.38□□□□□ -0.75
TOP3B-210ENST00000444502 MRPL43Q8N983 215 aaKnown RBP10.38□□□□□ -0.75
TOP3B-210ENST00000444502 FAM47BQ8NA70 645 aa10.38□□□□□ -0.75
TOP3B-210ENST00000444502 ITFG1Q8TB96 612 aa10.38□□□□□ -0.75
TOP3B-210ENST00000444502 TRIM45Q9H8W5 580 aaPredicted RBP10.38□□□□□ -0.75
TOP3B-210ENST00000444502 KCTD5Q9NXV2 234 aa10.38□□□□□ -0.75
TOP3B-210ENST00000444502 ANAPC2Q9UJX6 822 aa10.38□□□□□ -0.75
TOP3B-210ENST00000444502 GRID2O43424 1007 aa10.38□□□□□ -0.75
TOP3B-210ENST00000444502 RGS14O43566 566 aa10.38□□□□□ -0.75
TOP3B-210ENST00000444502 GSNP06396 782 aa10.38□□□□□ -0.75
TOP3B-210ENST00000444502 GDF5P43026 501 aa10.38□□□□□ -0.75
TOP3B-210ENST00000444502 CLK3P49761 638 aaKnown RBP10.38□□□□□ -0.75
TOP3B-210ENST00000444502 CDKN1CP49918 316 aaPredicted RBP10.38□□□□□ -0.75
TOP3B-210ENST00000444502 RAD23AP54725 363 aa10.38□□□□□ -0.75
TOP3B-210ENST00000444502 DSC1Q08554 894 aa10.38□□□□□ -0.75
TOP3B-210ENST00000444502 RFTN1Q14699 578 aaPredicted RBP10.38□□□□□ -0.75
TOP3B-210ENST00000444502 KCNJ8Q15842 424 aa10.38□□□□□ -0.75
TOP3B-210ENST00000444502 MAPKAPK3Q16644 382 aa10.38□□□□□ -0.75
TOP3B-210ENST00000444502 ITPRIPL2Q3MIP1 535 aa10.38□□□□□ -0.75
TOP3B-210ENST00000444502 Q6ZNX1 250 aa10.38□□□□□ -0.75
TOP3B-210ENST00000444502 SH2D5Q6ZV89 423 aa10.38□□□□□ -0.75
TOP3B-210ENST00000444502 GALNT13Q8IUC8 556 aa10.38□□□□□ -0.75
TOP3B-210ENST00000444502 TCEAL8Q8IYN2 117 aa10.38□□□□□ -0.75
TOP3B-210ENST00000444502 ZCCHC7Q8N3Z6 543 aaKnown RBP10.38□□□□□ -0.75
TOP3B-210ENST00000444502 CPSF7Q8N684 471 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms