RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 ANKRD22Q5VYY1 191 aa18.31■□□□□ 0.52
HMGB3P22-201ENST00000442010 C16orf46Q6P387 395 aa18.31■□□□□ 0.52
HMGB3P22-201ENST00000442010 SPESP1Q6UW49 350 aa18.31■□□□□ 0.52
HMGB3P22-201ENST00000442010 KRT222Q8N1A0 295 aa18.31■□□□□ 0.52
HMGB3P22-201ENST00000442010 OR1L3Q8NH93 324 aa18.31■□□□□ 0.52
HMGB3P22-201ENST00000442010 ASZ1Q8WWH4 475 aa18.31■□□□□ 0.52
HMGB3P22-201ENST00000442010 LRFN5Q96NI6 719 aa18.31■□□□□ 0.52
HMGB3P22-201ENST00000442010 OR2A14Q96R47 310 aa18.31■□□□□ 0.52
HMGB3P22-201ENST00000442010 RUFY1Q96T51 708 aa18.31■□□□□ 0.52
HMGB3P22-201ENST00000442010 MENTQ9BUN1 341 aa18.31■□□□□ 0.52
HMGB3P22-201ENST00000442010 SPHK1Q9NYA1 384 aa18.31■□□□□ 0.52
HMGB3P22-201ENST00000442010 OR6C2Q9NZP2 312 aa18.31■□□□□ 0.52
HMGB3P22-201ENST00000442010 TUBD1Q9UJT1 453 aa18.31■□□□□ 0.52
HMGB3P22-201ENST00000442010 PCDHB3Q9Y5E6 796 aa18.31■□□□□ 0.52
HMGB3P22-201ENST00000442010 PIPSLA2A3N6 862 aa18.3■□□□□ 0.52
HMGB3P22-201ENST00000442010 C21orf140B9A014 251 aa18.3■□□□□ 0.52
HMGB3P22-201ENST00000442010 CREG1O75629 220 aa18.3■□□□□ 0.52
HMGB3P22-201ENST00000442010 CHRM5P08912 532 aaPredicted RBP18.3■□□□□ 0.52
HMGB3P22-201ENST00000442010 UGT2B7P16662 529 aa18.3■□□□□ 0.52
HMGB3P22-201ENST00000442010 VPS41P49754 854 aa18.3■□□□□ 0.52
HMGB3P22-201ENST00000442010 CSE1LP55060 971 aaKnown RBP18.3■□□□□ 0.52
HMGB3P22-201ENST00000442010 HSPA14Q0VDF9 509 aa18.3■□□□□ 0.52
HMGB3P22-201ENST00000442010 GPS1Q13098 491 aa18.3■□□□□ 0.52
HMGB3P22-201ENST00000442010 GRB7Q14451 532 aa18.3■□□□□ 0.52
HMGB3P22-201ENST00000442010 ARMC3Q5W041 872 aa18.3■□□□□ 0.52
HMGB3P22-201ENST00000442010 FAM199XQ6PEV8 388 aaPredicted RBP18.3■□□□□ 0.52
HMGB3P22-201ENST00000442010 CES3Q6UWW8 571 aa18.3■□□□□ 0.52
HMGB3P22-201ENST00000442010 CAND1Q86VP6 1230 aaKnown RBP18.3■□□□□ 0.52
HMGB3P22-201ENST00000442010 TMEM126BQ8IUX1 230 aa18.3■□□□□ 0.52
HMGB3P22-201ENST00000442010 COG1Q8WTW3 980 aa18.3■□□□□ 0.52
HMGB3P22-201ENST00000442010 CPT1BQ92523 772 aa18.3■□□□□ 0.52
HMGB3P22-201ENST00000442010 MAGOHBQ96A72 148 aaKnown RBP18.3■□□□□ 0.52
HMGB3P22-201ENST00000442010 TSSK1BQ9BXA7 367 aa18.3■□□□□ 0.52
HMGB3P22-201ENST00000442010 SLC25A18Q9H1K4 315 aa18.3■□□□□ 0.52
HMGB3P22-201ENST00000442010 KCNF1Q9H3M0 494 aa18.3■□□□□ 0.52
HMGB3P22-201ENST00000442010 TDRKHQ9Y2W6 561 aaKnown RBP18.3■□□□□ 0.52
HMGB3P22-201ENST00000442010 TMEM150CB9EJG8 249 aa18.29■□□□□ 0.52
HMGB3P22-201ENST00000442010 AVILO75366 819 aa18.29■□□□□ 0.52
HMGB3P22-201ENST00000442010 TMEM63AO94886 807 aa18.29■□□□□ 0.52
HMGB3P22-201ENST00000442010 VAPBO95292 243 aa18.29■□□□□ 0.52
HMGB3P22-201ENST00000442010 PEBP1P30086 187 aaKnown RBP18.29■□□□□ 0.52
HMGB3P22-201ENST00000442010 RORAP35398 523 aa18.29■□□□□ 0.52
HMGB3P22-201ENST00000442010 COILP38432 576 aaPredicted RBP18.29■□□□□ 0.52
HMGB3P22-201ENST00000442010 GABRA4P48169 554 aa18.29■□□□□ 0.52
HMGB3P22-201ENST00000442010 KCNAB2Q13303 367 aa18.29■□□□□ 0.52
HMGB3P22-201ENST00000442010 ZIC1Q15915 447 aa18.29■□□□□ 0.52
HMGB3P22-201ENST00000442010 KYNUQ16719 465 aa18.29■□□□□ 0.52
HMGB3P22-201ENST00000442010 TYSND1Q2T9J0 566 aa18.29■□□□□ 0.52
HMGB3P22-201ENST00000442010 DEFB109BQ30KR1 87 aa18.29■□□□□ 0.52
HMGB3P22-201ENST00000442010 CTSL3PQ5NE16 218 aa18.29■□□□□ 0.52
HMGB3P22-201ENST00000442010 PLEKHS1Q5SXH7 462 aa18.29■□□□□ 0.52
HMGB3P22-201ENST00000442010 CDHR3Q6ZTQ4 885 aa18.29■□□□□ 0.52
HMGB3P22-201ENST00000442010 SLC35F6Q8N357 371 aa18.29■□□□□ 0.52
HMGB3P22-201ENST00000442010 BIRC8Q96P09 236 aa18.29■□□□□ 0.52
HMGB3P22-201ENST00000442010 GPR87Q9BY21 358 aa18.29■□□□□ 0.52
HMGB3P22-201ENST00000442010 CHRNA10Q9GZZ6 450 aa18.29■□□□□ 0.52
HMGB3P22-201ENST00000442010 KLHL25Q9H0H3 589 aa18.29■□□□□ 0.52
HMGB3P22-201ENST00000442010 FAM60AQ9NP50 221 aa18.29■□□□□ 0.52
HMGB3P22-201ENST00000442010 PLAGL1Q9UM63 463 aa18.29■□□□□ 0.52
HMGB3P22-201ENST00000442010 HEATR5BQ9P2D3 2071 aa18.28■□□□□ 0.52
HMGB3P22-201ENST00000442010 H3BMH7 237 aa18.28■□□□□ 0.52
HMGB3P22-201ENST00000442010 KATNA1O75449 491 aa18.28■□□□□ 0.52
HMGB3P22-201ENST00000442010 APOA4P06727 396 aa18.28■□□□□ 0.52
HMGB3P22-201ENST00000442010 PKLRP30613 574 aa18.28■□□□□ 0.52
HMGB3P22-201ENST00000442010 TERF1P54274 439 aa18.28■□□□□ 0.52
HMGB3P22-201ENST00000442010 ERV3-1Q14264 604 aa18.28■□□□□ 0.52
HMGB3P22-201ENST00000442010 KIAA0930Q6ICG6 404 aaPredicted RBP18.28■□□□□ 0.52
HMGB3P22-201ENST00000442010 LCN10Q6JVE6 187 aa18.28■□□□□ 0.52
HMGB3P22-201ENST00000442010 CCDC137Q6PK04 289 aaKnown RBP18.28■□□□□ 0.52
HMGB3P22-201ENST00000442010 UNC5DQ6UXZ4 953 aa18.28■□□□□ 0.52
HMGB3P22-201ENST00000442010 TRIM73Q86UV7 250 aa18.28■□□□□ 0.52
HMGB3P22-201ENST00000442010 LRRC6Q86X45 466 aa18.28■□□□□ 0.52
HMGB3P22-201ENST00000442010 DSELQ8IZU8 1212 aa18.28■□□□□ 0.52
HMGB3P22-201ENST00000442010 C19orf47Q8N9M1 422 aaKnown RBP18.28■□□□□ 0.52
HMGB3P22-201ENST00000442010 MCUQ8NE86 351 aa18.28■□□□□ 0.52
HMGB3P22-201ENST00000442010 ACTRT1Q8TDG2 376 aa18.28■□□□□ 0.52
HMGB3P22-201ENST00000442010 APOBEC4Q8WW27 367 aaKnown RBP18.28■□□□□ 0.52
HMGB3P22-201ENST00000442010 PANX3Q96QZ0 392 aa18.28■□□□□ 0.52
HMGB3P22-201ENST00000442010 OSBPL9Q96SU4 736 aa18.28■□□□□ 0.52
HMGB3P22-201ENST00000442010 ACTL8Q9H568 366 aa18.28■□□□□ 0.52
HMGB3P22-201ENST00000442010 FANCEQ9HB96 536 aa18.28■□□□□ 0.52
HMGB3P22-201ENST00000442010 GNPTGQ9UJJ9 305 aa18.28■□□□□ 0.52
HMGB3P22-201ENST00000442010 KCNMB2Q9Y691 235 aa18.28■□□□□ 0.52
HMGB3P22-201ENST00000442010 GOLGA8KD6RF30 607 aa18.27■□□□□ 0.52
HMGB3P22-201ENST00000442010 GOLGA8TH3BQL2 631 aa18.27■□□□□ 0.52
HMGB3P22-201ENST00000442010 PGRMC1O00264 195 aaKnown RBP18.27■□□□□ 0.52
HMGB3P22-201ENST00000442010 HCRTR1O43613 425 aa18.27■□□□□ 0.52
HMGB3P22-201ENST00000442010 NDUFS3O75489 264 aa18.27■□□□□ 0.52
HMGB3P22-201ENST00000442010 MLNP12872 115 aa18.27■□□□□ 0.52
HMGB3P22-201ENST00000442010 PTPN4P29074 926 aa18.27■□□□□ 0.52
HMGB3P22-201ENST00000442010 RAB28P51157 221 aa18.27■□□□□ 0.52
HMGB3P22-201ENST00000442010 SARNPP82979 210 aaKnown RBP18.27■□□□□ 0.52
HMGB3P22-201ENST00000442010 NFKB2Q00653 900 aa18.27■□□□□ 0.52
HMGB3P22-201ENST00000442010 IZUMO3Q5VZ72 239 aa18.27■□□□□ 0.52
HMGB3P22-201ENST00000442010 PTRHD1Q6GMV3 140 aaKnown RBP18.27■□□□□ 0.52
HMGB3P22-201ENST00000442010 TMEM135Q86UB9 458 aa18.27■□□□□ 0.52
HMGB3P22-201ENST00000442010 LINC01555Q8NAE3 123 aa18.27■□□□□ 0.52
HMGB3P22-201ENST00000442010 LPGAT1Q92604 370 aa18.27■□□□□ 0.52
HMGB3P22-201ENST00000442010 NAP1L3Q99457 506 aaPredicted RBP18.27■□□□□ 0.52
HMGB3P22-201ENST00000442010 TRIM56Q9BRZ2 755 aaKnown RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms