RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 MSTNO14793 375 aa7.23□□□□□ -1.25
LINC01049-201ENST00000426840 KPNA5O15131 536 aa7.23□□□□□ -1.25
LINC01049-201ENST00000426840 ICMTO60725 284 aa7.23□□□□□ -1.25
LINC01049-201ENST00000426840 SPAG6O75602 509 aa7.23□□□□□ -1.25
LINC01049-201ENST00000426840 GP1BAP07359 652 aa7.23□□□□□ -1.25
LINC01049-201ENST00000426840 FTH1P19P0C7X4 201 aa7.23□□□□□ -1.25
LINC01049-201ENST00000426840 SLC2A4P14672 509 aa7.23□□□□□ -1.25
LINC01049-201ENST00000426840 CHRM3P20309 590 aa7.23□□□□□ -1.25
LINC01049-201ENST00000426840 CD9P21926 228 aa7.23□□□□□ -1.25
LINC01049-201ENST00000426840 SOX18P35713 384 aa7.23□□□□□ -1.25
LINC01049-201ENST00000426840 PREPP48147 710 aa7.23□□□□□ -1.25
LINC01049-201ENST00000426840 CLCN7P51798 805 aa7.23□□□□□ -1.25
LINC01049-201ENST00000426840 E2F1Q01094 437 aa7.23□□□□□ -1.25
LINC01049-201ENST00000426840 PLOD1Q02809 727 aaPredicted RBP7.23□□□□□ -1.25
LINC01049-201ENST00000426840 HSPA14Q0VDF9 509 aa7.23□□□□□ -1.25
LINC01049-201ENST00000426840 HYAL2Q12891 473 aa7.23□□□□□ -1.25
LINC01049-201ENST00000426840 ILKQ13418 452 aa7.23□□□□□ -1.25
LINC01049-201ENST00000426840 SLMAPQ14BN4 828 aa7.23□□□□□ -1.25
LINC01049-201ENST00000426840 ERCC6LQ2NKX8 1250 aa7.23□□□□□ -1.25
LINC01049-201ENST00000426840 KBTBD12Q3ZCT8 623 aa7.23□□□□□ -1.25
LINC01049-201ENST00000426840 PPM1JQ5JR12 505 aa7.23□□□□□ -1.25
LINC01049-201ENST00000426840 PLEKHS1Q5SXH7 462 aa7.23□□□□□ -1.25
LINC01049-201ENST00000426840 RBM20Q5T481 1227 aaKnown RBP7.23□□□□□ -1.25
LINC01049-201ENST00000426840 CYHR1Q6ZMK1 362 aa7.23□□□□□ -1.25
LINC01049-201ENST00000426840 STRA8Q7Z7C7 330 aa7.23□□□□□ -1.25
LINC01049-201ENST00000426840 SLC9B2Q86UD5 537 aa7.23□□□□□ -1.25
LINC01049-201ENST00000426840 CD163Q86VB7 1156 aa7.23□□□□□ -1.25
LINC01049-201ENST00000426840 SLC26A11Q86WA9 606 aa7.23□□□□□ -1.25
LINC01049-201ENST00000426840 ZC3HC1Q86WB0 502 aaKnown RBP7.23□□□□□ -1.25
LINC01049-201ENST00000426840 WFDC8Q8IUA0 241 aa7.23□□□□□ -1.25
LINC01049-201ENST00000426840 SLC22A15Q8IZD6 547 aa7.23□□□□□ -1.25
LINC01049-201ENST00000426840 ACVR1CQ8NER5 493 aa7.23□□□□□ -1.25
LINC01049-201ENST00000426840 GIMAP7Q8NHV1 300 aa7.23□□□□□ -1.25
LINC01049-201ENST00000426840 IFI44Q8TCB0 444 aa7.23□□□□□ -1.25
LINC01049-201ENST00000426840 ASZ1Q8WWH4 475 aa7.23□□□□□ -1.25
LINC01049-201ENST00000426840 UBXN4Q92575 508 aa7.23□□□□□ -1.25
LINC01049-201ENST00000426840 NAT6Q93015 286 aa7.23□□□□□ -1.25
LINC01049-201ENST00000426840 CCDC74AQ96AQ1 378 aa7.23□□□□□ -1.25
LINC01049-201ENST00000426840 RMDN2Q96LZ7 410 aa7.23□□□□□ -1.25
LINC01049-201ENST00000426840 SPOCK3Q9BQ16 436 aa7.23□□□□□ -1.25
LINC01049-201ENST00000426840 TSSK1BQ9BXA7 367 aa7.23□□□□□ -1.25
LINC01049-201ENST00000426840 EPB41L4BQ9H329 900 aa7.23□□□□□ -1.25
LINC01049-201ENST00000426840 SLC40A1Q9NP59 571 aa7.23□□□□□ -1.25
LINC01049-201ENST00000426840 KLHL42Q9P2K6 505 aa7.23□□□□□ -1.25
LINC01049-201ENST00000426840 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.23□□□□□ -1.25
LINC01049-201ENST00000426840 APOBEC2Q9Y235 224 aaKnown RBP7.23□□□□□ -1.25
LINC01049-201ENST00000426840 MTO1Q9Y2Z2 717 aaKnown RBP7.23□□□□□ -1.25
LINC01049-201ENST00000426840 VWA7Q9Y334 891 aa7.23□□□□□ -1.25
LINC01049-201ENST00000426840 COMMD10Q9Y6G5 202 aa7.23□□□□□ -1.25
LINC01049-201ENST00000426840 V9GYY5 206 aaPredicted RBP7.23□□□□□ -1.25
LINC01049-201ENST00000426840 A0A1W2PQM1 296 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 RHPN2P1A8MT19 583 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 NTN3O00634 580 aaPredicted RBP7.22□□□□□ -1.25
LINC01049-201ENST00000426840 OPA1O60313 960 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 RFPL3O75679 317 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 FAM155BO75949 473 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 VIPP01282 170 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 RPLP1P05386 114 aaKnown RBP7.22□□□□□ -1.25
LINC01049-201ENST00000426840 APOA4P06727 396 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 SLC35G4P0C7Q5 338 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 TPBGLP0DKB5 382 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 MTHFD1P11586 935 aaKnown RBP7.22□□□□□ -1.25
LINC01049-201ENST00000426840 CD1CP29017 333 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 STX2P32856 288 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 GP5P40197 560 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 HALP42357 657 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 GPR3P46089 330 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 PGGT1BP53609 377 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 PMS2P54278 862 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 CSE1LP55060 971 aaKnown RBP7.22□□□□□ -1.25
LINC01049-201ENST00000426840 CDKN2DP55273 166 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 OR1D5P58170 312 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 TAS2R39P59534 338 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 VSNL1P62760 191 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 RAC1P63000 192 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 CCL7P80098 99 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 HHEXQ03014 270 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 CFHR1Q03591 330 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 ABRQ12979 859 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 SQSTM1Q13501 440 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 BOP1Q14137 746 aaKnown RBP7.22□□□□□ -1.25
LINC01049-201ENST00000426840 CCDC157Q569K6 752 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 ACSBG2Q5FVE4 666 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 HECTD2Q5U5R9 776 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 CDCP2Q5VXM1 449 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 DUS1LQ6P1R4 473 aaKnown RBP7.22□□□□□ -1.25
LINC01049-201ENST00000426840 WDR93Q6P2C0 686 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 TMEM207Q6UWW9 146 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 DHRS13Q6UX07 377 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 TMEM26Q6ZUK4 368 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 TRMT10CQ7L0Y3 403 aaKnown RBP7.22□□□□□ -1.25
LINC01049-201ENST00000426840 OTOAQ7RTW8 1153 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 SPRED1Q7Z699 444 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 PDZD3Q86UT5 571 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 ZNF761Q86XN6 746 aaPredicted RBP7.22□□□□□ -1.25
LINC01049-201ENST00000426840 RASGRP3Q8IV61 690 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 RBM12BQ8IXT5 1001 aaKnown RBP7.22□□□□□ -1.25
LINC01049-201ENST00000426840 GSPT2Q8IYD1 628 aaKnown RBP7.22□□□□□ -1.25
LINC01049-201ENST00000426840 PPM1NQ8N819 430 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 Q8N9G6 341 aaPredicted RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms