RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 COPG2Q9UBF2 871 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 CNOT8Q9UFF9 292 aaKnown RBP3.63□□□□□ -1.83
SF3B1-205ENST00000424674 CD300AQ9UGN4 299 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 POLLQ9UGP5 575 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 DBNLQ9UJU6 430 aaKnown RBP3.63□□□□□ -1.83
SF3B1-205ENST00000424674 VPS4AQ9UN37 437 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 MGAT4BQ9UQ53 548 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 HBS1LQ9Y450 684 aaKnown RBP3.63□□□□□ -1.83
SF3B1-205ENST00000424674 MAU2Q9Y6X3 613 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 UTYO14607 1347 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 AATKQ6ZMQ8 1374 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 ARHGEF17Q96PE2 2063 aaPredicted RBP3.63□□□□□ -1.83
SF3B1-205ENST00000424674 PTCH1Q13635 1447 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 A0A0U1RQJ8 604 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 A0A1W2PN81 502 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 PIPSLA2A3N6 862 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 KBTBD13C9JR72 458 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 ADM5C9JUS6 153 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 TLR4O00206 839 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 MAGEB2O15479 319 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 OGG1O15527 345 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 ATG13O75143 517 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 NIPSNAP2O75323 286 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 VPS4BO75351 444 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 GCATO75600 419 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 CRTAPO75718 401 aaPredicted RBP3.62□□□□□ -1.83
SF3B1-205ENST00000424674 RAD51DO75771 328 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 KRT36O76013 467 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 CSTAP01040 98 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 IL1BP01584 269 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 IGHEP01854 428 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 HIST1H2ABP04908 130 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 HEXAP06865 529 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 IQCF3P0C7M6 154 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 TMEM225BP0DP42 221 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 TROVE2P10155 538 aaKnown RBP eCLIP3.62□□□□□ -1.83
SF3B1-205ENST00000424674 ERVK-10P10266 1014 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 HIST1H2ADP20671 130 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 HOXD9P28356 352 aaPredicted RBP3.62□□□□□ -1.83
SF3B1-205ENST00000424674 PPIFP30405 207 aaKnown RBP3.62□□□□□ -1.83
SF3B1-205ENST00000424674 SLC16A2P36021 539 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 CHRNA7P36544 502 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 SYKP43405 635 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 CDKN1BP46527 198 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 SLC6A12P48065 614 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 HTR6P50406 440 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 ZNF75DP51815 510 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 HNRNPFP52597 415 aaKnown RBP3.62□□□□□ -1.83
SF3B1-205ENST00000424674 AIF1P55008 147 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 MFAP3P55082 362 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 FOXL2P58012 376 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 RPL23AP62750 156 aaKnown RBP3.62□□□□□ -1.83
SF3B1-205ENST00000424674 CSNK2BP67870 215 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 B4GALNT1Q00973 533 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 ITIH3Q06033 890 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 RESTQ13127 1097 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 PDE7AQ13946 482 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 E2F2Q14209 437 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 UBXN2BQ14CS0 331 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 SHBQ15464 509 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 SSX2Q16385 188 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 SMTNL2Q2TAL5 461 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 AP5B1Q2VPB7 878 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 EDRF1Q3B7T1 1238 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 PTCHD3Q3KNS1 767 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 USH1GQ495M9 461 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 NKAIN1Q4KMZ8 207 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 ABHD17BQ5VST6 288 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 LRRC38Q5VT99 294 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 KCTD11Q693B1 232 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 CAPRIN2Q6IMN6 1127 aaKnown RBP3.62□□□□□ -1.83
SF3B1-205ENST00000424674 ARMC6Q6NXE6 501 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 IL20RBQ6UXL0 311 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 DLEU7Q6UYE1 221 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 ZBTB49Q6ZSB9 765 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 HIST3H2AQ7L7L0 130 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 EFL1Q7Z2Z2 1120 aaKnown RBP3.62□□□□□ -1.83
SF3B1-205ENST00000424674 PIGWQ7Z7B1 504 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 FAM228AQ86W67 206 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 ADGRG3Q86Y34 549 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 COMMD1Q8N668 190 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 FITM2Q8N6M3 262 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 RNF148Q8N7C7 305 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 CLEC1AQ8NC01 280 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 HJURPQ8NCD3 748 aaPredicted RBP3.62□□□□□ -1.83
SF3B1-205ENST00000424674 PDPRQ8NCN5 879 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 PSD4Q8NDX1 1056 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 FAM71CQ8NEG0 241 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 OR9A1PQ8NGU1 263 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 OR2T3Q8NH03 318 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 CLHC1Q8NHS4 586 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 MAFAQ8NHW3 353 aaPredicted RBP3.62□□□□□ -1.83
SF3B1-205ENST00000424674 FAM76AQ8TAV0 307 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 OIT3Q8WWZ8 545 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 ATL1Q8WXF7 558 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 ASB10Q8WXI3 467 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 CDKL2Q92772 493 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 APBB2Q92870 758 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 ST6GALNAC6Q969X2 333 aa3.62□□□□□ -1.83
SF3B1-205ENST00000424674 SLC41A3Q96GZ6 507 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms