RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 PPP1R3BQ86XI6 285 aa10.62□□□□□ -0.71
USP49-204ENST00000423567 DTX1Q86Y01 620 aa10.62□□□□□ -0.71
USP49-204ENST00000423567 DCUN1D3Q8IWE4 304 aa10.62□□□□□ -0.71
USP49-204ENST00000423567 RAB42Q8N4Z0 105 aa10.62□□□□□ -0.71
USP49-204ENST00000423567 ZBTB2Q8N680 514 aa10.62□□□□□ -0.71
USP49-204ENST00000423567 ZSCAN1Q8NBB4 408 aa10.62□□□□□ -0.71
USP49-204ENST00000423567 PMEPA1Q969W9 287 aa10.62□□□□□ -0.71
USP49-204ENST00000423567 SLC41A2Q96JW4 573 aa10.62□□□□□ -0.71
USP49-204ENST00000423567 EBNA1BP2Q99848 306 aaKnown RBP10.62□□□□□ -0.71
USP49-204ENST00000423567 TRIM56Q9BRZ2 755 aaKnown RBP10.62□□□□□ -0.71
USP49-204ENST00000423567 TRIM31Q9BZY9 425 aa10.62□□□□□ -0.71
USP49-204ENST00000423567 PRORYQ9H606 182 aa10.62□□□□□ -0.71
USP49-204ENST00000423567 XKR8Q9H6D3 395 aa10.62□□□□□ -0.71
USP49-204ENST00000423567 FANCEQ9HB96 536 aa10.62□□□□□ -0.71
USP49-204ENST00000423567 CPNE5Q9HCH3 593 aa10.62□□□□□ -0.71
USP49-204ENST00000423567 APMAPQ9HDC9 416 aa10.62□□□□□ -0.71
USP49-204ENST00000423567 C1GALT1Q9NS00 363 aa10.62□□□□□ -0.71
USP49-204ENST00000423567 IL1RAPL1Q9NZN1 696 aa10.62□□□□□ -0.71
USP49-204ENST00000423567 OR6C2Q9NZP2 312 aa10.62□□□□□ -0.71
USP49-204ENST00000423567 SEMA5BQ9P283 1151 aa10.62□□□□□ -0.71
USP49-204ENST00000423567 POMT2Q9UKY4 750 aa10.62□□□□□ -0.71
USP49-204ENST00000423567 RARRES3Q9UL19 164 aa10.62□□□□□ -0.71
USP49-204ENST00000423567 FAM169AQ9Y6X4 670 aa10.62□□□□□ -0.71
USP49-204ENST00000423567 DMXL2Q8TDJ6 3036 aa10.62□□□□□ -0.71
USP49-204ENST00000423567 KIF26BQ2KJY2 2108 aa10.61□□□□□ -0.71
USP49-204ENST00000423567 TEX51A0A1B0GUA7 166 aa10.61□□□□□ -0.71
USP49-204ENST00000423567 PIPSLA2A3N6 862 aa10.61□□□□□ -0.71
USP49-204ENST00000423567 FAM187AA6NFU0 413 aa10.61□□□□□ -0.71
USP49-204ENST00000423567 BTN3A3O00478 584 aa10.61□□□□□ -0.71
USP49-204ENST00000423567 BTN3A1O00481 513 aa10.61□□□□□ -0.71
USP49-204ENST00000423567 FANCGO15287 622 aa10.61□□□□□ -0.71
USP49-204ENST00000423567 NIPSNAP2O75323 286 aa10.61□□□□□ -0.71
USP49-204ENST00000423567 STK17BO94768 372 aa10.61□□□□□ -0.71
USP49-204ENST00000423567 SEC31AO94979 1220 aaKnown RBP10.61□□□□□ -0.71
USP49-204ENST00000423567 IVDP26440 423 aa10.61□□□□□ -0.71
USP49-204ENST00000423567 MAP4P27816 1152 aaKnown RBP10.61□□□□□ -0.71
USP49-204ENST00000423567 PRDX3P30048 256 aaKnown RBP10.61□□□□□ -0.71
USP49-204ENST00000423567 KPNA2P52292 529 aaKnown RBP10.61□□□□□ -0.71
USP49-204ENST00000423567 ITGA8P53708 1063 aa10.61□□□□□ -0.71
USP49-204ENST00000423567 CALCOCO2Q13137 446 aa10.61□□□□□ -0.71
USP49-204ENST00000423567 CTBP1Q13363 440 aa10.61□□□□□ -0.71
USP49-204ENST00000423567 CRYMQ14894 314 aa10.61□□□□□ -0.71
USP49-204ENST00000423567 HIF1AQ16665 826 aa10.61□□□□□ -0.71
USP49-204ENST00000423567 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.61□□□□□ -0.71
USP49-204ENST00000423567 HSP90AA5PQ58FG0 334 aa10.61□□□□□ -0.71
USP49-204ENST00000423567 ARHGAP40Q5TG30 622 aa10.61□□□□□ -0.71
USP49-204ENST00000423567 HIBCHQ6NVY1 386 aaPredicted RBP10.61□□□□□ -0.71
USP49-204ENST00000423567 UNC5AQ6ZN44 842 aa10.61□□□□□ -0.71
USP49-204ENST00000423567 CENPUQ71F23 418 aa10.61□□□□□ -0.71
USP49-204ENST00000423567 VRK3Q8IV63 474 aa10.61□□□□□ -0.71
USP49-204ENST00000423567 DENND6AQ8IWF6 608 aa10.61□□□□□ -0.71
USP49-204ENST00000423567 CACNA2D3Q8IZS8 1091 aa10.61□□□□□ -0.71
USP49-204ENST00000423567 NLGN4XQ8N0W4 816 aa10.61□□□□□ -0.71
USP49-204ENST00000423567 D2HGDHQ8N465 521 aa10.61□□□□□ -0.71
USP49-204ENST00000423567 ESX1Q8N693 406 aa10.61□□□□□ -0.71
USP49-204ENST00000423567 SPATA4Q8NEY3 305 aa10.61□□□□□ -0.71
USP49-204ENST00000423567 NLGN4YQ8NFZ3 816 aaPredicted RBP10.61□□□□□ -0.71
USP49-204ENST00000423567 MAGEC3Q8TD91 643 aa10.61□□□□□ -0.71
USP49-204ENST00000423567 KIAA1143Q96AT1 154 aaPredicted RBP10.61□□□□□ -0.71
USP49-204ENST00000423567 LRRC39Q96DD0 335 aa10.61□□□□□ -0.71
USP49-204ENST00000423567 CFAP36Q96G28 342 aa10.61□□□□□ -0.71
USP49-204ENST00000423567 CRELD1Q96HD1 420 aa10.61□□□□□ -0.71
USP49-204ENST00000423567 ELMO2Q96JJ3 720 aa10.61□□□□□ -0.71
USP49-204ENST00000423567 BIRC8Q96P09 236 aa10.61□□□□□ -0.71
USP49-204ENST00000423567 RAB11FIP5Q9BXF6 653 aa10.61□□□□□ -0.71
USP49-204ENST00000423567 ULBP3Q9BZM4 244 aa10.61□□□□□ -0.71
USP49-204ENST00000423567 PPANQ9NQ55 473 aaKnown RBP10.61□□□□□ -0.71
USP49-204ENST00000423567 FBXO6Q9NRD1 293 aaPredicted RBP10.61□□□□□ -0.71
USP49-204ENST00000423567 IARS2Q9NSE4 1012 aaKnown RBP10.61□□□□□ -0.71
USP49-204ENST00000423567 ACTR10Q9NZ32 417 aa10.61□□□□□ -0.71
USP49-204ENST00000423567 ZC3H7BQ9UGR2 993 aaKnown RBP10.61□□□□□ -0.71
USP49-204ENST00000423567 SLC39A10Q9ULF5 831 aa10.61□□□□□ -0.71
USP49-204ENST00000423567 ICKQ9UPZ9 632 aa10.61□□□□□ -0.71
USP49-204ENST00000423567 COMMD10Q9Y6G5 202 aa10.61□□□□□ -0.71
USP49-204ENST00000423567 BPTFQ12830 3046 aa10.61□□□□□ -0.71
USP49-204ENST00000423567 SLC9B1P1A6NJY1 282 aa10.6□□□□□ -0.71
USP49-204ENST00000423567 BANF1O75531 89 aa10.6□□□□□ -0.71
USP49-204ENST00000423567 S1PR4O95977 384 aa10.6□□□□□ -0.71
USP49-204ENST00000423567 MT-ND3P03897 115 aa10.6□□□□□ -0.71
USP49-204ENST00000423567 CHRM5P08912 532 aaPredicted RBP10.6□□□□□ -0.71
USP49-204ENST00000423567 EBLN1P0CF75 366 aa10.6□□□□□ -0.71
USP49-204ENST00000423567 FGF5P12034 268 aa10.6□□□□□ -0.71
USP49-204ENST00000423567 ATP5DP30049 168 aa10.6□□□□□ -0.71
USP49-204ENST00000423567 CCNFP41002 786 aa10.6□□□□□ -0.71
USP49-204ENST00000423567 SLC1A2P43004 574 aa10.6□□□□□ -0.71
USP49-204ENST00000423567 RAB28P51157 221 aa10.6□□□□□ -0.71
USP49-204ENST00000423567 TUBB4BP68371 445 aa10.6□□□□□ -0.71
USP49-204ENST00000423567 CKAP4Q07065 602 aaKnown RBP10.6□□□□□ -0.71
USP49-204ENST00000423567 TUBB2AQ13885 445 aa10.6□□□□□ -0.71
USP49-204ENST00000423567 KCNAB1Q14722 419 aa10.6□□□□□ -0.71
USP49-204ENST00000423567 SWT1Q5T5J6 900 aaKnown RBP10.6□□□□□ -0.71
USP49-204ENST00000423567 SPESP1Q6UW49 350 aa10.6□□□□□ -0.71
USP49-204ENST00000423567 C6orf15Q6UXA7 325 aaPredicted RBP10.6□□□□□ -0.71
USP49-204ENST00000423567 VASH2Q86V25 355 aa10.6□□□□□ -0.71
USP49-204ENST00000423567 ADGRF3Q8IZF5 1079 aa10.6□□□□□ -0.71
USP49-204ENST00000423567 AGGF1Q8N302 714 aaeCLIP10.6□□□□□ -0.71
USP49-204ENST00000423567 OR8K5Q8NH50 307 aa10.6□□□□□ -0.71
USP49-204ENST00000423567 N4BP2L2Q92802 583 aaPredicted RBP10.6□□□□□ -0.71
USP49-204ENST00000423567 NKD1Q969G9 470 aa10.6□□□□□ -0.71
USP49-204ENST00000423567 RAD51AP1Q96B01 352 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms