RNA–Protein interactions for RNA: ENST00000414862.5

TRA2B-204, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-204ENST00000414862 CUL4AQ13619 759 aa7.73□□□□□ -1.17
TRA2B-204ENST00000414862 CBWD6Q4V339 395 aa7.73□□□□□ -1.17
TRA2B-204ENST00000414862 LACTB2Q53H82 288 aaPredicted RBP7.73□□□□□ -1.17
TRA2B-204ENST00000414862 CBWD3Q5JTY5 395 aa7.73□□□□□ -1.17
TRA2B-204ENST00000414862 CBWD5Q5RIA9 395 aa7.73□□□□□ -1.17
TRA2B-204ENST00000414862 ABHD17BQ5VST6 288 aa7.73□□□□□ -1.17
TRA2B-204ENST00000414862 SYPL2Q5VXT5 272 aa7.73□□□□□ -1.17
TRA2B-204ENST00000414862 RESP18Q5W5W9 173 aa7.73□□□□□ -1.17
TRA2B-204ENST00000414862 HIST2H2BCQ6DN03 193 aa7.73□□□□□ -1.17
TRA2B-204ENST00000414862 DPY19L3Q6ZPD9 716 aa7.73□□□□□ -1.17
TRA2B-204ENST00000414862 PARS2Q7L3T8 475 aaKnown RBP7.73□□□□□ -1.17
TRA2B-204ENST00000414862 GKN2Q86XP6 184 aa7.73□□□□□ -1.17
TRA2B-204ENST00000414862 Q8N9G6 341 aaPredicted RBP7.73□□□□□ -1.17
TRA2B-204ENST00000414862 CCDC112Q8NEF3 446 aa7.73□□□□□ -1.17
TRA2B-204ENST00000414862 OR52K2Q8NGK3 314 aa7.73□□□□□ -1.17
TRA2B-204ENST00000414862 ASB12Q8WXK4 309 aa7.73□□□□□ -1.17
TRA2B-204ENST00000414862 TFAP2BQ92481 460 aa7.73□□□□□ -1.17
TRA2B-204ENST00000414862 RAB7BQ96AH8 199 aa7.73□□□□□ -1.17
TRA2B-204ENST00000414862 PAGE5Q96GU1 130 aa7.73□□□□□ -1.17
TRA2B-204ENST00000414862 KLF6Q99612 283 aaPredicted RBP7.73□□□□□ -1.17
TRA2B-204ENST00000414862 KRTAP9-3Q9BYQ3 159 aa7.73□□□□□ -1.17
TRA2B-204ENST00000414862 B3GNT4Q9C0J1 378 aa7.73□□□□□ -1.17
TRA2B-204ENST00000414862 CLPBQ9H078 707 aa7.73□□□□□ -1.17
TRA2B-204ENST00000414862 ZNF71Q9NQZ8 489 aaPredicted RBP7.73□□□□□ -1.17
TRA2B-204ENST00000414862 COX16Q9P0S2 106 aa7.73□□□□□ -1.17
TRA2B-204ENST00000414862 TBC1D30Q9Y2I9 924 aa7.73□□□□□ -1.17
TRA2B-204ENST00000414862 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.73□□□□□ -1.17
TRA2B-204ENST00000414862 OR51B4Q9Y5P0 310 aa7.73□□□□□ -1.17
TRA2B-204ENST00000414862 SNX13Q9Y5W8 968 aa7.73□□□□□ -1.17
TRA2B-204ENST00000414862 ICE1Q9Y2F5 2266 aa7.73□□□□□ -1.17
TRA2B-204ENST00000414862 KIF26BQ2KJY2 2108 aa7.73□□□□□ -1.17
TRA2B-204ENST00000414862 TMEM233B4DJY2 109 aa7.72□□□□□ -1.17
TRA2B-204ENST00000414862 CETN3O15182 167 aa7.72□□□□□ -1.17
TRA2B-204ENST00000414862 SMAD6O43541 496 aaKnown RBP7.72□□□□□ -1.17
TRA2B-204ENST00000414862 ADCY5O95622 1261 aa7.72□□□□□ -1.17
TRA2B-204ENST00000414862 LIFP15018 202 aa7.72□□□□□ -1.17
TRA2B-204ENST00000414862 SERPINH1P50454 418 aaKnown RBP7.72□□□□□ -1.17
TRA2B-204ENST00000414862 DNA2P51530 1060 aa7.72□□□□□ -1.17
TRA2B-204ENST00000414862 CCNHP51946 323 aaPredicted RBP7.72□□□□□ -1.17
TRA2B-204ENST00000414862 ZNF134P52741 427 aa7.72□□□□□ -1.17
TRA2B-204ENST00000414862 YWHAZP63104 245 aaKnown RBP7.72□□□□□ -1.17
TRA2B-204ENST00000414862 ZFP36L1Q07352 338 aaKnown RBP7.72□□□□□ -1.17
TRA2B-204ENST00000414862 LRMPQ12912 555 aa7.72□□□□□ -1.17
TRA2B-204ENST00000414862 TUBB3Q13509 450 aa7.72□□□□□ -1.17
TRA2B-204ENST00000414862 EDRF1Q3B7T1 1238 aa7.72□□□□□ -1.17
TRA2B-204ENST00000414862 FHL5Q5TD97 284 aa7.72□□□□□ -1.17
TRA2B-204ENST00000414862 RETSATQ6NUM9 610 aa7.72□□□□□ -1.17
TRA2B-204ENST00000414862 LINGO4Q6UY18 593 aa7.72□□□□□ -1.17
TRA2B-204ENST00000414862 VPS36Q86VN1 386 aa7.72□□□□□ -1.17
TRA2B-204ENST00000414862 PCDH20Q8N6Y1 951 aaKnown RBP7.72□□□□□ -1.17
TRA2B-204ENST00000414862 KIAA1143Q96AT1 154 aaPredicted RBP7.72□□□□□ -1.17
TRA2B-204ENST00000414862 MIB2Q96AX9 1013 aa7.72□□□□□ -1.17
TRA2B-204ENST00000414862 EDEM3Q9BZQ6 932 aa7.72□□□□□ -1.17
TRA2B-204ENST00000414862 ZDHHC6Q9H6R6 413 aa7.72□□□□□ -1.17
TRA2B-204ENST00000414862 APPL1Q9UKG1 709 aa7.72□□□□□ -1.17
TRA2B-204ENST00000414862 RNF215Q9Y6U7 377 aa7.72□□□□□ -1.17
TRA2B-204ENST00000414862 CSMD1Q96PZ7 3565 aa7.72□□□□□ -1.17
TRA2B-204ENST00000414862 TDRD6O60522 2096 aaKnown RBP7.72□□□□□ -1.17
TRA2B-204ENST00000414862 FBN2P35556 2912 aa7.72□□□□□ -1.17
TRA2B-204ENST00000414862 RHPN2P1A8MT19 583 aa7.71□□□□□ -1.18
TRA2B-204ENST00000414862 E5RJQ4 531 aa7.71□□□□□ -1.18
TRA2B-204ENST00000414862 RNF103O00237 685 aa7.71□□□□□ -1.18
TRA2B-204ENST00000414862 SLC16A3O15427 465 aaKnown RBP7.71□□□□□ -1.18
TRA2B-204ENST00000414862 TRIAP1O43715 76 aa7.71□□□□□ -1.18
TRA2B-204ENST00000414862 PRKAR1AP10644 381 aa7.71□□□□□ -1.18
TRA2B-204ENST00000414862 COPB1P53618 953 aaKnown RBP7.71□□□□□ -1.18
TRA2B-204ENST00000414862 KLRB1Q12918 225 aa7.71□□□□□ -1.18
TRA2B-204ENST00000414862 NME3Q13232 169 aa7.71□□□□□ -1.18
TRA2B-204ENST00000414862 ARHGEF7Q14155 803 aa7.71□□□□□ -1.18
TRA2B-204ENST00000414862 ZCWPW2Q504Y3 356 aa7.71□□□□□ -1.18
TRA2B-204ENST00000414862 CERCAMQ5T4B2 595 aa7.71□□□□□ -1.18
TRA2B-204ENST00000414862 TMEM108Q6UXF1 575 aa7.71□□□□□ -1.18
TRA2B-204ENST00000414862 SETD3Q86TU7 594 aaPredicted RBP7.71□□□□□ -1.18
TRA2B-204ENST00000414862 VRK3Q8IV63 474 aa7.71□□□□□ -1.18
TRA2B-204ENST00000414862 CACNA2D3Q8IZS8 1091 aa7.71□□□□□ -1.18
TRA2B-204ENST00000414862 GUF1Q8N442 669 aaKnown RBP7.71□□□□□ -1.18
TRA2B-204ENST00000414862 RYBPQ8N488 228 aaPredicted RBP7.71□□□□□ -1.18
TRA2B-204ENST00000414862 SLC30A5Q8TAD4 765 aa7.71□□□□□ -1.18
TRA2B-204ENST00000414862 CXorf40AQ8TE69 158 aa7.71□□□□□ -1.18
TRA2B-204ENST00000414862 SSC4DQ8WTU2 575 aa7.71□□□□□ -1.18
TRA2B-204ENST00000414862 NEU4Q8WWR8 484 aaPredicted RBP7.71□□□□□ -1.18
TRA2B-204ENST00000414862 Q96MF0 132 aa7.71□□□□□ -1.18
TRA2B-204ENST00000414862 HAPLN3Q96S86 360 aa7.71□□□□□ -1.18
TRA2B-204ENST00000414862 PSMB7Q99436 277 aa7.71□□□□□ -1.18
TRA2B-204ENST00000414862 MS4A7Q9GZW8 240 aaPredicted RBP7.71□□□□□ -1.18
TRA2B-204ENST00000414862 THAP9Q9H5L6 903 aa7.71□□□□□ -1.18
TRA2B-204ENST00000414862 CASS4Q9NQ75 786 aa7.71□□□□□ -1.18
TRA2B-204ENST00000414862 KLQ9UEF7 1012 aa7.71□□□□□ -1.18
TRA2B-204ENST00000414862 VPS4AQ9UN37 437 aa7.71□□□□□ -1.18
TRA2B-204ENST00000414862 ITM2BQ9Y287 266 aa7.71□□□□□ -1.18
TRA2B-204ENST00000414862 COQ4Q9Y3A0 265 aa7.71□□□□□ -1.18
TRA2B-204ENST00000414862 A0A0D9SEW6 157 aa7.7□□□□□ -1.18
TRA2B-204ENST00000414862 C16orf96A6NNT2 1141 aa7.7□□□□□ -1.18
TRA2B-204ENST00000414862 TMEM110-MUSTN1A8MSY1 372 aa7.7□□□□□ -1.18
TRA2B-204ENST00000414862 ZW10O43264 779 aa7.7□□□□□ -1.18
TRA2B-204ENST00000414862 MED7O43513 233 aa7.7□□□□□ -1.18
TRA2B-204ENST00000414862 HSF2BPO75031 334 aa7.7□□□□□ -1.18
TRA2B-204ENST00000414862 TM7SF2O76062 418 aa7.7□□□□□ -1.18
TRA2B-204ENST00000414862 RHOBTB3O94955 611 aa7.7□□□□□ -1.18
TRA2B-204ENST00000414862 CPNE6O95741 557 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms