RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 MYNNQ9NPC7 610 aa2.59□□□□□ -1.99
CD47-203ENST00000398258 OSER1Q9NX31 292 aa2.59□□□□□ -1.99
CD47-203ENST00000398258 MIOSQ9NXC5 875 aa2.59□□□□□ -1.99
CD47-203ENST00000398258 RALYQ9UKM9 306 aaKnown RBP2.59□□□□□ -1.99
CD47-203ENST00000398258 KCNS2Q9ULS6 477 aa2.59□□□□□ -1.99
CD47-203ENST00000398258 A0A1B0GUV1 79 aa2.58□□□□□ -2
CD47-203ENST00000398258 A0A1W2PPI3 338 aa2.58□□□□□ -2
CD47-203ENST00000398258 DENND3A2RUS2 1198 aa2.58□□□□□ -2
CD47-203ENST00000398258 HTR3EA5X5Y0 456 aa2.58□□□□□ -2
CD47-203ENST00000398258 NEMP2A6NFY4 417 aa2.58□□□□□ -2
CD47-203ENST00000398258 SLC30A4O14863 429 aa2.58□□□□□ -2
CD47-203ENST00000398258 SLC7A4O43246 635 aa2.58□□□□□ -2
CD47-203ENST00000398258 BAG4O95429 457 aaKnown RBP2.58□□□□□ -2
CD47-203ENST00000398258 IGHV4-39P01824 125 aa2.58□□□□□ -2
CD47-203ENST00000398258 CSN3P07498 182 aa2.58□□□□□ -2
CD47-203ENST00000398258 ZFYP08048 801 aaPredicted RBP2.58□□□□□ -2
CD47-203ENST00000398258 CDH1P12830 882 aa2.58□□□□□ -2
CD47-203ENST00000398258 MPZP25189 248 aa2.58□□□□□ -2
CD47-203ENST00000398258 TIA1P31483 386 aaKnown RBP eCLIP2.58□□□□□ -22e-6■■■■□ 24.8
CD47-203ENST00000398258 COPB2P35606 906 aa2.58□□□□□ -2
CD47-203ENST00000398258 TCF7P36402 384 aaPredicted RBP2.58□□□□□ -2
CD47-203ENST00000398258 LHX1P48742 406 aa2.58□□□□□ -2
CD47-203ENST00000398258 FUT6P51993 359 aa2.58□□□□□ -2
CD47-203ENST00000398258 CLDN15P56746 228 aa2.58□□□□□ -2
CD47-203ENST00000398258 ERVFC1-1P60608 527 aa2.58□□□□□ -2
CD47-203ENST00000398258 ITGA7Q13683 1181 aa2.58□□□□□ -2
CD47-203ENST00000398258 KIR2DS3Q14952 304 aa2.58□□□□□ -2
CD47-203ENST00000398258 DUOXA1Q1HG43 343 aa2.58□□□□□ -2
CD47-203ENST00000398258 TWISTNBQ3B726 338 aaPredicted RBP2.58□□□□□ -2
CD47-203ENST00000398258 MDH1BQ5I0G3 518 aa2.58□□□□□ -2
CD47-203ENST00000398258 OTUD3Q5T2D3 398 aaPredicted RBP2.58□□□□□ -2
CD47-203ENST00000398258 FAM171BQ6P995 826 aa2.58□□□□□ -2
CD47-203ENST00000398258 SPSB3Q6PJ21 355 aa2.58□□□□□ -2
CD47-203ENST00000398258 UNQ6126/PRO20091Q6UXV3 157 aa2.58□□□□□ -2
CD47-203ENST00000398258 KRTAP5-5Q701N2 237 aaPredicted RBP2.58□□□□□ -2
CD47-203ENST00000398258 PIWIL4Q7Z3Z4 852 aaKnown RBP2.58□□□□□ -2
CD47-203ENST00000398258 NUDT13Q86X67 352 aa2.58□□□□□ -2
CD47-203ENST00000398258 SFR1Q86XK3 245 aa2.58□□□□□ -2
CD47-203ENST00000398258 MFN1Q8IWA4 741 aa2.58□□□□□ -2
CD47-203ENST00000398258 TIGD4Q8IY51 512 aa2.58□□□□□ -2
CD47-203ENST00000398258 NAGSQ8N159 534 aa2.58□□□□□ -2
CD47-203ENST00000398258 CCAR2Q8N163 923 aaKnown RBP2.58□□□□□ -2
CD47-203ENST00000398258 OR5M8Q8NGP6 311 aa2.58□□□□□ -2
CD47-203ENST00000398258 GOT1L1Q8NHS2 421 aaPredicted RBP2.58□□□□□ -2
CD47-203ENST00000398258 FGFBP3Q8TAT2 258 aa2.58□□□□□ -2
CD47-203ENST00000398258 SETD6Q8TBK2 473 aa2.58□□□□□ -2
CD47-203ENST00000398258 RNF128Q8TEB7 428 aa2.58□□□□□ -2
CD47-203ENST00000398258 SEMA4DQ92854 862 aa2.58□□□□□ -2
CD47-203ENST00000398258 SCRN2Q96FV2 425 aa2.58□□□□□ -2
CD47-203ENST00000398258 IL17FQ96PD4 163 aa2.58□□□□□ -2
CD47-203ENST00000398258 CPNE1Q99829 537 aa2.58□□□□□ -2
CD47-203ENST00000398258 MGME1Q9BQP7 344 aa2.58□□□□□ -2
CD47-203ENST00000398258 MLPHQ9BV36 600 aaPredicted RBP2.58□□□□□ -2
CD47-203ENST00000398258 FAM129AQ9BZQ8 928 aa2.58□□□□□ -2
CD47-203ENST00000398258 Q9N2K0 584 aa2.58□□□□□ -2
CD47-203ENST00000398258 CHCHD3Q9NX63 227 aaKnown RBP2.58□□□□□ -2
CD47-203ENST00000398258 STK26Q9P289 416 aa2.58□□□□□ -2
CD47-203ENST00000398258 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.58□□□□□ -2
CD47-203ENST00000398258 SPIN1Q9Y657 262 aaPredicted RBP2.58□□□□□ -2
CD47-203ENST00000398258 ZFP37Q9Y6Q3 630 aaPredicted RBP2.58□□□□□ -2
CD47-203ENST00000398258 SAA2-SAA4A0A096LPE2 208 aa2.57□□□□□ -2
CD47-203ENST00000398258 A0A1W2PPK0 400 aa2.57□□□□□ -2
CD47-203ENST00000398258 C5orf52A6NGY3 159 aa2.57□□□□□ -2
CD47-203ENST00000398258 ENO4A6NNW6 628 aa2.57□□□□□ -2
CD47-203ENST00000398258 CTSVO60911 334 aa2.57□□□□□ -2
CD47-203ENST00000398258 PENKP01210 267 aaPredicted RBP2.57□□□□□ -2
CD47-203ENST00000398258 LIPFP07098 398 aa2.57□□□□□ -2
CD47-203ENST00000398258 HSP90AB1P08238 724 aaKnown RBP2.57□□□□□ -2
CD47-203ENST00000398258 INHBAP08476 426 aa2.57□□□□□ -2
CD47-203ENST00000398258 SAGP10523 405 aaPredicted RBP2.57□□□□□ -2
CD47-203ENST00000398258 EPCAMP16422 314 aa2.57□□□□□ -2
CD47-203ENST00000398258 CD22P20273 847 aa2.57□□□□□ -2
CD47-203ENST00000398258 MUTP22033 750 aa2.57□□□□□ -2
CD47-203ENST00000398258 HSPA4P34932 840 aa2.57□□□□□ -2
CD47-203ENST00000398258 NR2C2P49116 596 aa2.57□□□□□ -2
CD47-203ENST00000398258 AMPHP49418 695 aa2.57□□□□□ -2
CD47-203ENST00000398258 ALDH3A2P51648 485 aa2.57□□□□□ -2
CD47-203ENST00000398258 THOP1P52888 689 aa2.57□□□□□ -2
CD47-203ENST00000398258 TUBB4BP68371 445 aa2.57□□□□□ -2
CD47-203ENST00000398258 DLK1P80370 383 aa2.57□□□□□ -2
CD47-203ENST00000398258 PLA2G7Q13093 441 aa2.57□□□□□ -2
CD47-203ENST00000398258 PRKAA1Q13131 559 aa2.57□□□□□ -2
CD47-203ENST00000398258 UGCGQ16739 394 aa2.57□□□□□ -2
CD47-203ENST00000398258 MRGPRG-AS1Q2M3A8 158 aa2.57□□□□□ -2
CD47-203ENST00000398258 TYSND1Q2T9J0 566 aa2.57□□□□□ -2
CD47-203ENST00000398258 FAM174BQ3ZCQ3 159 aa2.57□□□□□ -2
CD47-203ENST00000398258 SYT14P1Q58G82 188 aa2.57□□□□□ -2
CD47-203ENST00000398258 ZRANB3Q5FWF4 1079 aa2.57□□□□□ -2
CD47-203ENST00000398258 FAM76BQ5HYJ3 339 aa2.57□□□□□ -2
CD47-203ENST00000398258 CCNYL2Q5T2Q4 361 aa2.57□□□□□ -2
CD47-203ENST00000398258 MPP7Q5T2T1 576 aa2.57□□□□□ -2
CD47-203ENST00000398258 NDUFAF5Q5TEU4 345 aa2.57□□□□□ -2
CD47-203ENST00000398258 MFSD12Q6NUT3 480 aa2.57□□□□□ -2
CD47-203ENST00000398258 CAVIN1Q6NZI2 390 aaKnown RBP2.57□□□□□ -2
CD47-203ENST00000398258 NOTUMQ6P988 496 aa2.57□□□□□ -2
CD47-203ENST00000398258 PET117Q6UWS5 81 aa2.57□□□□□ -2
CD47-203ENST00000398258 PPP1R21Q6ZMI0 780 aa2.57□□□□□ -2
CD47-203ENST00000398258 MSANTD1Q6ZTZ1 278 aa2.57□□□□□ -2
CD47-203ENST00000398258 FAM47EQ6ZV65 393 aa2.57□□□□□ -2
CD47-203ENST00000398258 SPATA19Q7Z5L4 167 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms