RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 GIMAP7Q8NHV1 300 aa7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 ASZ1Q8WWH4 475 aa7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 KLHL6Q8WZ60 621 aa7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 RUNDC3BQ96NL0 473 aa7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 EBNA1BP2Q99848 306 aaKnown RBP7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 DDA1Q9BW61 102 aa7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 TSSK1BQ9BXA7 367 aa7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 RAB33BQ9H082 229 aa7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 TFB2MQ9H5Q4 396 aaKnown RBP7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 MVB12BQ9H7P6 319 aa7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 PPANQ9NQ55 473 aaKnown RBP7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 SOHLH2Q9NX45 425 aa7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 ACTR10Q9NZ32 417 aa7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 RNF14Q9UBS8 474 aa7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 EPHA6Q9UF33 1036 aa7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 POMT2Q9UKY4 750 aa7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 MED16Q9Y2X0 877 aa7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 PCDHGA3Q9Y5H0 932 aa7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 FAM169AQ9Y6X4 670 aa7.44□□□□□ -1.22
HMGB3P1-201ENST00000393368 ESYT3A0FGR9 886 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 TLCD2A6NGC4 264 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 E5RI56 91 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 F8W8V4 182 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 STMND1H3BQB6 276 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 RAD1O60671 282 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 PIAS1O75925 651 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 URI1O94763 535 aaPredicted RBP7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 STK17BO94768 372 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 SLCO2B1O94956 709 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 ESR1P03372 595 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 CHRM5P08912 532 aaPredicted RBP7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 ST6GAL1P15907 406 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 UGT2B7P16662 529 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 NELFEP18615 380 aaKnown RBP7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 CDH3P22223 829 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 GABRB3P28472 473 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 PRDX3P30048 256 aaKnown RBP7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 PKLRP30613 574 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 ARL4DP49703 201 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 CLCN7P51798 805 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 ARL4CP56559 192 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 RAB15P59190 212 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 CYP4F2P78329 520 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 SLC7A5Q01650 507 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 PDIA2Q13087 525 aaKnown RBP7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 PRKAA1Q13131 559 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 TUBB3Q13509 450 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 DSG2Q14126 1118 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 DEFB110Q30KQ9 67 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 SPANXN3Q5MJ09 141 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 MANEAQ5SRI9 462 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 RBM20Q5T481 1227 aaKnown RBP7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 PRAMEF17Q5VTA0 474 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 CEACAM20Q6UY09 585 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 TIPARPQ7Z3E1 657 aaKnown RBP7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 DTX1Q86Y01 620 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 RASGRP3Q8IV61 690 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 TBC1D21Q8IYX1 336 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 PDIK1LQ8N165 341 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 ZBTB2Q8N680 514 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 LINC01555Q8NAE3 123 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 FBXO36Q8NEA4 188 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 ZFPM2Q8WW38 1151 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 UBXN4Q92575 508 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 CERS2Q96G23 380 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 SLC41A2Q96JW4 573 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 PANX3Q96QZ0 392 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 TCF12Q99081 682 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 GPR21Q99679 349 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 ERP44Q9BS26 406 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 MENTQ9BUN1 341 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 KRTAP3-3Q9BYR6 98 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 KRTAP3-2Q9BYR7 98 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 DPH1Q9BZG8 443 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 PRORYQ9H606 182 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 FBXO8Q9NRD0 319 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 INTS10Q9NVR2 710 aaKnown RBP7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 GRHL1Q9NZI5 618 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 ZC3H7BQ9UGR2 993 aaKnown RBP7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 FBXO5Q9UKT4 447 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 ACSL6Q9UKU0 697 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 KLHL20Q9Y2M5 609 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 TEX264Q9Y6I9 313 aa7.43□□□□□ -1.22
HMGB3P1-201ENST00000393368 ADAMTS20P59510 1910 aa7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 PIPSLA2A3N6 862 aa7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 FAM187AA6NFU0 413 aa7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 C2orf74A8MZ97 194 aa7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 ISM1B1AKI9 464 aa7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 PFDN6O15212 129 aa7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 TOX3O15405 576 aaPredicted RBP7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 HCRTR1O43613 425 aa7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 KIAA0754O94854 1291 aa7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 C1orf105O95561 183 aa7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 CTSBP07858 339 aa7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 LIFP15018 202 aa7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 PSMB5P28074 263 aa7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 SHMT2P34897 504 aa7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 ADARP55265 1226 aaKnown RBP7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 CDKN2DP55273 166 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms