RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 CRHBPP24387 322 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 GABARAPL2P60520 117 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 C1QTNF8P60827 252 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 FKBP1BP68106 108 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 ZNF45Q02386 682 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 EFR3AQ14156 821 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 KCNJ11Q14654 390 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 LTB4RQ15722 352 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 CDO1Q16878 200 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 SPRYD7Q5W111 196 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 TYW3Q6IPR3 259 aaKnown RBP8.69□□□□□ -1.02
ATG4A-203ENST00000372232 GPAT4Q86UL3 456 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 SPATA2LQ8IUW3 424 aaPredicted RBP8.69□□□□□ -1.02
ATG4A-203ENST00000372232 SLC22A15Q8IZD6 547 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 TCTE3Q8IZS6 198 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 BLOC1S5Q8TDH9 187 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 SLC9A6Q92581 669 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 C12orf57Q99622 126 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 SLC6A15Q9H2J7 730 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 ZNF385DQ9H6B1 395 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 MRM3Q9HC36 420 aaKnown RBP8.69□□□□□ -1.02
ATG4A-203ENST00000372232 CYP4F12Q9HCS2 524 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 FAM49BQ9NUQ9 324 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 REV1Q9UBZ9 1251 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 USP22Q9UPT9 525 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 COPG1Q9Y678 874 aaKnown RBP8.69□□□□□ -1.02
ATG4A-203ENST00000372232 HSPE1-MOB4S4R3N1 261 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 SMIM35A0A1B0GVV1 85 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 TCRBV7S3A2A0A539 114 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 SELLP14151 372 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 RAB3AP20336 220 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 ELK4P28324 431 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 RPS5P46782 204 aaKnown RBP8.69□□□□□ -1.02
ATG4A-203ENST00000372232 SLC6A3Q01959 620 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 ROR1Q01973 937 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 CSTF3Q12996 717 aaKnown RBP8.69□□□□□ -1.02
ATG4A-203ENST00000372232 MTM1Q13496 603 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 TFDP2Q14188 446 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 ZNF273Q14593 569 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 NOMO1Q15155 1222 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 ZNF124Q15973 351 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 SOWAHAQ2M3V2 549 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 DPY19L1Q2PZI1 675 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 GLRA4Q5JXX5 417 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 COLEC12Q5KU26 742 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 PRAMEF19Q5SWL8 479 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 PIK3R6Q5UE93 754 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 C9orf57Q5W0N0 161 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 NPNTQ6UXI9 565 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 ZNF517Q6ZMY9 492 aaPredicted RBP8.69□□□□□ -1.02
ATG4A-203ENST00000372232 UNC93AQ86WB7 457 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 ST8SIA2Q92186 375 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 PPP1R14AQ96A00 147 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 RNF157Q96PX1 679 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 OR52B2Q96RD2 323 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 PCDHAC1Q9H158 963 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 MMP27Q9H306 513 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 NXF3Q9H4D5 531 aaKnown RBP8.69□□□□□ -1.02
ATG4A-203ENST00000372232 NIPAL2Q9H841 368 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 COG4Q9H9E3 785 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 RANGRFQ9HD47 186 aaPredicted RBP8.69□□□□□ -1.02
ATG4A-203ENST00000372232 AGPAT4Q9NRZ5 378 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 OSGIN1Q9UJX0 560 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 GJD2Q9UKL4 321 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 AGO1Q9UL18 857 aaKnown RBP8.69□□□□□ -1.02
ATG4A-203ENST00000372232 ACOT9Q9Y305 439 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 NAALAD2Q9Y3Q0 740 aa8.69□□□□□ -1.02
ATG4A-203ENST00000372232 TRAV20A0A0B4J274 112 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 RNF103-CHMP3A0A140T963 221 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 RECQL4O94761 1208 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 TMEM63AO94886 807 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 PIGNO95427 931 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 CHRNA1P02708 482 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 PROS1P07225 676 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 HTR1AP08908 422 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 PF4V1P10720 104 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 NME1P15531 152 aaKnown RBP8.68□□□□□ -1.02
ATG4A-203ENST00000372232 MAGP20916 626 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 AKAP5P24588 427 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 GTF2E2P29084 291 aaKnown RBP8.68□□□□□ -1.02
ATG4A-203ENST00000372232 SDC4P31431 198 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 GGT5P36269 586 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 GZMKP49863 264 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 NRLP54845 237 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 PRKCDQ05655 676 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 CCINQ13939 588 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 PDK2Q15119 407 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 SLC9B1Q4ZJI4 515 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 MROH9Q5TGP6 573 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 ARHGAP17Q68EM7 881 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 DARS2Q6PI48 645 aaKnown RBP8.68□□□□□ -1.02
ATG4A-203ENST00000372232 STRADAQ7RTN6 431 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 RAB43Q86YS6 212 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 GPALPP1Q8IXQ4 340 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 TAB3Q8N5C8 712 aaPredicted RBP8.68□□□□□ -1.02
ATG4A-203ENST00000372232 PLD5Q8N7P1 536 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 OR6B3Q8NGW1 331 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 OR10T2Q8NGX3 314 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 MCFD2Q8NI22 146 aa8.68□□□□□ -1.02
ATG4A-203ENST00000372232 FYTTD1Q96QD9 318 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms