RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 ACADLP28330 430 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 CD6P30203 668 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 SHMT1P34896 483 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 TTPAP49638 278 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 ST3GAL4Q11206 333 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 GK3PQ14409 553 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 RHEBQ15382 184 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 SYVN1Q86TM6 617 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 TBC1D15Q8TC07 691 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 ACER1Q8TDN7 264 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 LINGO1Q96FE5 620 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 LHX5Q9H2C1 402 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 POLHQ9Y253 713 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 WWP2O00308 870 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 AP2S1P53680 142 aaPredicted RBP5.97□□□□□ -1.45
VPS13B-203ENST00000358544 ANKRD54Q6NXT1 300 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 NLGN1Q8N2Q7 840 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 ASB15Q8WXK1 588 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 RTFDC1Q9BY42 306 aaPredicted RBP5.97□□□□□ -1.45
VPS13B-203ENST00000358544 OR51J1Q9H342 316 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 AGPAT4Q9NRZ5 378 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 MKS1Q9NXB0 559 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 POU2F3Q9UKI9 436 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 FAM50BQ9Y247 325 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 PCDHGB3Q9Y5G1 929 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 CDH10Q9Y6N8 788 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 RRN3P2A6NIE6 340 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 SMIM22K7EJ46 135 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 ZNF460Q14592 562 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 ESCO2Q56NI9 601 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 BRMS1LQ5PSV4 323 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 C1orf189Q5VU69 101 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 OR8K5Q8NH50 307 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 MUS81Q96NY9 551 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 ZNF607Q96SK3 696 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 TCEAL7Q9BRU2 100 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 CAPN10Q9HC96 672 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 DDX4Q9NQI0 724 aaKnown RBP5.97□□□□□ -1.45
VPS13B-203ENST00000358544 ARMC1Q9NVT9 282 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.97□□□□□ -1.458e-6■■■□□ 18.6
VPS13B-203ENST00000358544 PCDH17O14917 1159 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 ZNF3P17036 446 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 HOXD11P31277 338 aaPredicted RBP5.97□□□□□ -1.45
VPS13B-203ENST00000358544 TRIM23P36406 574 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 SRSF11Q05519 484 aaKnown RBP5.97□□□□□ -1.45
VPS13B-203ENST00000358544 GPR158Q5T848 1215 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 PRAMEF17Q5VTA0 474 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 FBXL19Q6PCT2 694 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 CFAP77Q6ZQR2 320 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 ZC3HC1Q86WB0 502 aaKnown RBP5.97□□□□□ -1.45
VPS13B-203ENST00000358544 CARM1Q86X55 608 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 AGBL3Q8NEM8 1001 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 C1orf109Q9NX04 203 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 NUFIP1Q9UHK0 495 aaKnown RBP5.97□□□□□ -1.45
VPS13B-203ENST00000358544 POLR1DQ9Y2S0 133 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 MRPL42Q9Y6G3 142 aaKnown RBP5.97□□□□□ -1.45
VPS13B-203ENST00000358544 FGF1P05230 155 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 PROS1P07225 676 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 SPATA31C1P0DKV0 1188 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 HMGCS2P54868 508 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 MS4A2Q01362 244 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 PRKCDQ05655 676 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 XYLT1Q86Y38 959 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 Q8N402 240 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 UBE2E3Q969T4 207 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 GTPBP3Q969Y2 492 aaKnown RBP5.97□□□□□ -1.45
VPS13B-203ENST00000358544 IL4I1Q96RQ9 567 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 IL1RAPQ9NPH3 570 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 TVP23BQ9NYZ1 205 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 ZNF639Q9UID6 485 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 LRRN3E7EW58 273 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 STX16O14662 325 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 ANXA5P08758 320 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 MAN2A2P49641 1150 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 PAMR1Q6UXH9 720 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 UNC93AQ86WB7 457 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 INO80EQ8NBZ0 244 aaPredicted RBP5.97□□□□□ -1.45
VPS13B-203ENST00000358544 PIGXQ8TBF5 258 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 USP7Q93009 1102 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 LRRN3Q9H3W5 708 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 IL37Q9NZH6 218 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 ZNF451Q9Y4E5 1061 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 PCDHB3Q9Y5E6 796 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 NT5C1B-RDH14C9J2C7 533 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 EEF1E1O43324 174 aaKnown RBP5.97□□□□□ -1.45
VPS13B-203ENST00000358544 CDRT1O95170 752 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 FSTL5Q8N475 847 aaPredicted RBP5.97□□□□□ -1.45
VPS13B-203ENST00000358544 COQ10AQ96MF6 247 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 CCDC32Q9BV29 185 aa5.97□□□□□ -1.45
VPS13B-203ENST00000358544 RC3H2Q9HBD1 1191 aaKnown RBP5.97□□□□□ -1.45
VPS13B-203ENST00000358544 ZBTB14O43829 449 aa5.96□□□□□ -1.45
VPS13B-203ENST00000358544 KIAA0513O60268 411 aa5.96□□□□□ -1.45
VPS13B-203ENST00000358544 HBP1O60381 514 aa5.96□□□□□ -1.45
VPS13B-203ENST00000358544 CYBBP04839 570 aa5.96□□□□□ -1.45
VPS13B-203ENST00000358544 IFNA6P05013 189 aa5.96□□□□□ -1.45
VPS13B-203ENST00000358544 FGRP09769 529 aa5.96□□□□□ -1.45
VPS13B-203ENST00000358544 DARSP14868 501 aaKnown RBP5.96□□□□□ -1.45
VPS13B-203ENST00000358544 OTOP3Q7RTS5 596 aa5.96□□□□□ -1.45
VPS13B-203ENST00000358544 PDZD9Q8IXQ8 264 aa5.96□□□□□ -1.45
VPS13B-203ENST00000358544 ARHGEF4Q9NR80 690 aa5.96□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms