RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 ZNF267Q14586 743 aaPredicted RBP17.34■□□□□ 0.37
SMAD4-201ENST00000342988 SUSD4Q5VX71 490 aa17.34■□□□□ 0.37
SMAD4-201ENST00000342988 CHRFAM7AQ494W8 412 aa17.34■□□□□ 0.37
SMAD4-201ENST00000342988 CLEC17AQ6ZS10 378 aa17.34■□□□□ 0.37
SMAD4-201ENST00000342988 CPA6Q8N4T0 437 aa17.34■□□□□ 0.37
SMAD4-201ENST00000342988 BTRCQ9Y297 605 aa17.34■□□□□ 0.37
SMAD4-201ENST00000342988 CA5BQ9Y2D0 317 aa17.34■□□□□ 0.37
SMAD4-201ENST00000342988 RIC1Q4ADV7 1423 aa17.34■□□□□ 0.37
SMAD4-201ENST00000342988 SCN2AQ99250 2005 aa17.34■□□□□ 0.37
SMAD4-201ENST00000342988 XKP51811 444 aa17.34■□□□□ 0.37
SMAD4-201ENST00000342988 EIF2B1Q14232 305 aaKnown RBP17.34■□□□□ 0.37
SMAD4-201ENST00000342988 DEFB128Q7Z7B8 93 aa17.34■□□□□ 0.37
SMAD4-201ENST00000342988 CD320Q9NPF0 282 aa17.34■□□□□ 0.37
SMAD4-201ENST00000342988 ANGPTL7O43827 346 aa17.34■□□□□ 0.37
SMAD4-201ENST00000342988 ALPPP05187 535 aa17.34■□□□□ 0.37
SMAD4-201ENST00000342988 PTGR1Q14914 329 aa17.34■□□□□ 0.37
SMAD4-201ENST00000342988 ZNF529Q6P280 563 aa17.34■□□□□ 0.37
SMAD4-201ENST00000342988 KCTD9Q7L273 389 aa17.34■□□□□ 0.37
SMAD4-201ENST00000342988 FBXO6Q9NRD1 293 aaPredicted RBP17.34■□□□□ 0.37
SMAD4-201ENST00000342988 SEPT4O43236 478 aa17.34■□□□□ 0.37
SMAD4-201ENST00000342988 UGT2B4P06133 528 aa17.34■□□□□ 0.37
SMAD4-201ENST00000342988 GMPSP49915 693 aaPredicted RBP17.34■□□□□ 0.37
SMAD4-201ENST00000342988 PSMA6P60900 246 aaKnown RBP17.34■□□□□ 0.37
SMAD4-201ENST00000342988 ERI1Q8IV48 349 aaKnown RBP17.34■□□□□ 0.37
SMAD4-201ENST00000342988 IQCF1Q8N6M8 205 aa17.34■□□□□ 0.37
SMAD4-201ENST00000342988 NYAP2Q9P242 653 aa17.34■□□□□ 0.37
SMAD4-201ENST00000342988 MAGED1Q9Y5V3 778 aaPredicted RBP17.34■□□□□ 0.37
SMAD4-201ENST00000342988 MUSKO15146 869 aa17.34■□□□□ 0.37
SMAD4-201ENST00000342988 ACOX3O15254 700 aa17.34■□□□□ 0.37
SMAD4-201ENST00000342988 TBL1XO60907 577 aa17.34■□□□□ 0.37
SMAD4-201ENST00000342988 RAC2P15153 192 aa17.34■□□□□ 0.37
SMAD4-201ENST00000342988 TMEM164Q5U3C3 297 aa17.34■□□□□ 0.37
SMAD4-201ENST00000342988 SLC29A4Q7RTT9 530 aa17.34■□□□□ 0.37
SMAD4-201ENST00000342988 AMIGO2Q86SJ2 522 aa17.34■□□□□ 0.37
SMAD4-201ENST00000342988 POLR2J2Q9GZM3 115 aaKnown RBP17.34■□□□□ 0.37
SMAD4-201ENST00000342988 ASB7Q9H672 318 aa17.34■□□□□ 0.37
SMAD4-201ENST00000342988 ENTPD3O75355 529 aa17.33■□□□□ 0.37
SMAD4-201ENST00000342988 PIM1P11309 404 aaPredicted RBP17.33■□□□□ 0.37
SMAD4-201ENST00000342988 CAP2P40123 477 aa17.33■□□□□ 0.37
SMAD4-201ENST00000342988 TARDBPQ13148 414 aaKnown RBP eCLIP17.33■□□□□ 0.37
SMAD4-201ENST00000342988 PLEKHH3Q7Z736 793 aa17.33■□□□□ 0.37
SMAD4-201ENST00000342988 GAL3ST4Q96RP7 486 aa17.33■□□□□ 0.37
SMAD4-201ENST00000342988 TUBA1CQ9BQE3 449 aa17.33■□□□□ 0.37
SMAD4-201ENST00000342988 ZFP57Q9NU63 452 aa17.33■□□□□ 0.37
SMAD4-201ENST00000342988 TLR6Q9Y2C9 796 aa17.33■□□□□ 0.37
SMAD4-201ENST00000342988 ZNF286BP0CG31 522 aa17.33■□□□□ 0.37
SMAD4-201ENST00000342988 CXCR1P25024 350 aa17.33■□□□□ 0.37
SMAD4-201ENST00000342988 SMARCB1Q12824 385 aa17.33■□□□□ 0.37
SMAD4-201ENST00000342988 GLYATQ6IB77 296 aa17.33■□□□□ 0.37
SMAD4-201ENST00000342988 UNC5AQ6ZN44 842 aa17.33■□□□□ 0.37
SMAD4-201ENST00000342988 LNX2Q8N448 690 aa17.33■□□□□ 0.37
SMAD4-201ENST00000342988 TRPM1Q7Z4N2 1603 aa17.33■□□□□ 0.37
SMAD4-201ENST00000342988 ZNF670-ZNF695F2Z2N8 137 aa17.33■□□□□ 0.37
SMAD4-201ENST00000342988 AGPSO00116 658 aa17.33■□□□□ 0.37
SMAD4-201ENST00000342988 GMDSO60547 372 aa17.33■□□□□ 0.37
SMAD4-201ENST00000342988 RYKP34925 604 aa17.33■□□□□ 0.37
SMAD4-201ENST00000342988 SLC15A1P46059 708 aa17.33■□□□□ 0.37
SMAD4-201ENST00000342988 PPP5CP53041 499 aa17.33■□□□□ 0.37
SMAD4-201ENST00000342988 PSPHP78330 225 aa17.33■□□□□ 0.37
SMAD4-201ENST00000342988 PLGLB1Q02325 96 aa17.33■□□□□ 0.37
SMAD4-201ENST00000342988 CD47Q08722 323 aa17.33■□□□□ 0.37
SMAD4-201ENST00000342988 SLC39A12Q504Y0 691 aa17.33■□□□□ 0.37
SMAD4-201ENST00000342988 NXPE1Q8N323 547 aa17.33■□□□□ 0.37
SMAD4-201ENST00000342988 METTL25Q8N6Q8 603 aa17.33■□□□□ 0.37
SMAD4-201ENST00000342988 OR52J3Q8NH60 311 aa17.33■□□□□ 0.37
SMAD4-201ENST00000342988 COPS8Q99627 209 aa17.33■□□□□ 0.37
SMAD4-201ENST00000342988 FAM205AQ6ZU69 1335 aa17.33■□□□□ 0.36
SMAD4-201ENST00000342988 PIP5K1BO14986 540 aa17.33■□□□□ 0.36
SMAD4-201ENST00000342988 HCRTR2O43614 444 aa17.33■□□□□ 0.36
SMAD4-201ENST00000342988 PQBP1O60828 265 aaKnown RBP17.33■□□□□ 0.36
SMAD4-201ENST00000342988 DRD4P21917 467 aa17.33■□□□□ 0.36
SMAD4-201ENST00000342988 SBK1Q52WX2 424 aa17.33■□□□□ 0.36
SMAD4-201ENST00000342988 GTPBP3Q969Y2 492 aaKnown RBP17.33■□□□□ 0.36
SMAD4-201ENST00000342988 S100A14Q9HCY8 104 aa17.33■□□□□ 0.36
SMAD4-201ENST00000342988 RLIMQ9NVW2 624 aa17.33■□□□□ 0.36
SMAD4-201ENST00000342988 PIH1D1Q9NWS0 290 aaKnown RBP17.33■□□□□ 0.36
SMAD4-201ENST00000342988 TBC1D3DA0A087WVF3 549 aa17.33■□□□□ 0.36
SMAD4-201ENST00000342988 TBC1D3IA0A087WXS9 549 aa17.33■□□□□ 0.36
SMAD4-201ENST00000342988 TBC1D3EA0A087X179 549 aa17.33■□□□□ 0.36
SMAD4-201ENST00000342988 TBC1D3KA0A087X1G2 549 aa17.33■□□□□ 0.36
SMAD4-201ENST00000342988 TBC1D3FA6NER0 549 aaPredicted RBP17.33■□□□□ 0.36
SMAD4-201ENST00000342988 TBC1D3LB9A6J9 549 aa17.33■□□□□ 0.36
SMAD4-201ENST00000342988 TBC1D3HP0C7X1 549 aa17.33■□□□□ 0.36
SMAD4-201ENST00000342988 EDNRAP25101 427 aa17.33■□□□□ 0.36
SMAD4-201ENST00000342988 PER3P56645 1201 aa17.33■□□□□ 0.36
SMAD4-201ENST00000342988 TBC1D3GQ6DHY5 549 aa17.33■□□□□ 0.36
SMAD4-201ENST00000342988 TBC1D3CQ6IPX1 549 aa17.33■□□□□ 0.36
SMAD4-201ENST00000342988 BAIAP2L2Q6UXY1 529 aa17.33■□□□□ 0.36
SMAD4-201ENST00000342988 TBC1D3Q8IZP1 549 aaPredicted RBP17.33■□□□□ 0.36
SMAD4-201ENST00000342988 OSTF1Q92882 214 aa17.33■□□□□ 0.36
SMAD4-201ENST00000342988 CCDC106Q9BWC9 280 aa17.33■□□□□ 0.36
SMAD4-201ENST00000342988 HIPK2Q9H2X6 1198 aa17.33■□□□□ 0.36
SMAD4-201ENST00000342988 DNAJC5Q9H3Z4 198 aa17.33■□□□□ 0.36
SMAD4-201ENST00000342988 GPATCH2LQ9NWQ4 482 aa17.33■□□□□ 0.36
SMAD4-201ENST00000342988 ZFYVE16Q7Z3T8 1539 aa17.33■□□□□ 0.36
SMAD4-201ENST00000342988 ARL6IP5O75915 188 aa17.33■□□□□ 0.36
SMAD4-201ENST00000342988 GLI1P08151 1106 aa17.33■□□□□ 0.36
SMAD4-201ENST00000342988 CSTF2P33240 577 aaKnown RBP eCLIP17.33■□□□□ 0.36
SMAD4-201ENST00000342988 SMSP52788 366 aa17.33■□□□□ 0.36
SMAD4-201ENST00000342988 LYSMD3Q7Z3D4 306 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms