RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 DNMT3LQ9UJW3 386 aa16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 NYNRINQ9P2P1 1898 aaKnown RBP16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 MEN1O00255 615 aa16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 FFAR2O15552 330 aa16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 ULK1O75385 1050 aa16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 RPL17P18621 184 aaKnown RBP16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 HOXC8P31273 242 aa16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 POLR2IP36954 125 aaKnown RBP16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 RGS4P49798 205 aa16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 MGAT3Q09327 533 aa16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 LAPTM4AQ15012 233 aa16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 INAVAQ3KP66 663 aa16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 CLLU1OSQ5K130 101 aa16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 SPANXN4Q5MJ08 99 aa16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 ATXN7L2Q5T6C5 722 aaPredicted RBP16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 GALNT5Q7Z7M9 940 aa16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 ZNF598Q86UK7 904 aaKnown RBP16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 SLC13A3Q8WWT9 602 aa16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 SLC47A1Q96FL8 570 aa16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 ZFYVE19Q96K21 471 aa16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 ALPK1Q96QP1 1244 aa16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 OR52E6Q96RD3 313 aa16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 TDRD1Q9BXT4 1180 aaKnown RBP16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 C8orf4Q9NR00 106 aa16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 TSPAN9O75954 239 aa16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 ZNF682O95780 498 aa16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 OTCP00480 354 aa16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 HPCAL1P37235 193 aa16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 PUS10Q3MIT2 529 aaKnown RBP16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 CTSL3PQ5NE16 218 aa16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 ARTNQ5T4W7 220 aa16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 CACHD1Q5VU97 1274 aa16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 PTRH1Q86Y79 214 aaKnown RBP16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 TERB1Q8NA31 727 aa16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 FAM120BQ96EK7 910 aaKnown RBP16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 C12orf4Q9NQ89 552 aa16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 FARSBQ9NSD9 589 aaKnown RBP16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 HCSTQ9UBK5 93 aa16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 OPTCQ9UBM4 332 aa16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 BAG5Q9UL15 447 aa16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 SATB2Q9UPW6 733 aa16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 TNPO3Q9Y5L0 923 aaKnown RBP16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 ARVCFO00192 962 aa16.19■□□□□ 0.18
CDC42EP4-201ENST00000335793 CYP4B1P13584 511 aa16.19■□□□□ 0.18
CDC42EP4-201ENST00000335793 GATMP50440 423 aa16.19■□□□□ 0.18
CDC42EP4-201ENST00000335793 HTRA3P83110 453 aa16.19■□□□□ 0.18
CDC42EP4-201ENST00000335793 OCA2Q04671 838 aa16.19■□□□□ 0.18
CDC42EP4-201ENST00000335793 PRSS55Q6UWB4 352 aaPredicted RBP16.19■□□□□ 0.18
CDC42EP4-201ENST00000335793 ADAMTSL2Q86TH1 951 aa16.19■□□□□ 0.18
CDC42EP4-201ENST00000335793 ELMOD2Q8IZ81 293 aa16.19■□□□□ 0.18
CDC42EP4-201ENST00000335793 KRTCAP2Q8N6L1 136 aa16.19■□□□□ 0.18
CDC42EP4-201ENST00000335793 LEMD2Q8NC56 503 aa16.19■□□□□ 0.18
CDC42EP4-201ENST00000335793 ZNF420Q8TAQ5 688 aaPredicted RBP16.19■□□□□ 0.18
CDC42EP4-201ENST00000335793 ZNF382Q96SR6 550 aa16.19■□□□□ 0.18
CDC42EP4-201ENST00000335793 MGME1Q9BQP7 344 aa16.19■□□□□ 0.18
CDC42EP4-201ENST00000335793 ZNF236Q9UL36 1845 aa16.19■□□□□ 0.18
CDC42EP4-201ENST00000335793 PABPN1LA6NDY0 278 aaKnown RBP16.19■□□□□ 0.18
CDC42EP4-201ENST00000335793 LRATO95237 230 aa16.19■□□□□ 0.18
CDC42EP4-201ENST00000335793 SLC25A14O95258 325 aaPredicted RBP16.19■□□□□ 0.18
CDC42EP4-201ENST00000335793 FLT3LGP49771 235 aa16.19■□□□□ 0.18
CDC42EP4-201ENST00000335793 NFATC3Q12968 1075 aa16.19■□□□□ 0.18
CDC42EP4-201ENST00000335793 GRIK2Q13002 908 aa16.19■□□□□ 0.18
CDC42EP4-201ENST00000335793 PWP1Q13610 501 aa16.19■□□□□ 0.18
CDC42EP4-201ENST00000335793 DGCR6Q14129 220 aa16.19■□□□□ 0.18
CDC42EP4-201ENST00000335793 GTDC1Q4AE62 458 aa16.19■□□□□ 0.18
CDC42EP4-201ENST00000335793 ATAD3BQ5T9A4 648 aa16.19■□□□□ 0.18
CDC42EP4-201ENST00000335793 ZNF773Q6PK81 442 aa16.19■□□□□ 0.18
CDC42EP4-201ENST00000335793 LIX1Q8N485 282 aa16.19■□□□□ 0.18
CDC42EP4-201ENST00000335793 BRINP2Q9C0B6 783 aa16.19■□□□□ 0.18
CDC42EP4-201ENST00000335793 LHPPQ9H008 270 aa16.19■□□□□ 0.18
CDC42EP4-201ENST00000335793 IRF2BPLQ9H1B7 796 aa16.19■□□□□ 0.18
CDC42EP4-201ENST00000335793 UTS2RQ9UKP6 389 aa16.19■□□□□ 0.18
CDC42EP4-201ENST00000335793 ZNF490Q9ULM2 529 aaPredicted RBP16.19■□□□□ 0.18
CDC42EP4-201ENST00000335793 FCF1Q9Y324 198 aaKnown RBP16.19■□□□□ 0.18
CDC42EP4-201ENST00000335793 PCDHB3Q9Y5E6 796 aa16.19■□□□□ 0.18
CDC42EP4-201ENST00000335793 MTMR11A4FU01 709 aa16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 TTC34A8MYJ7 566 aa16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 RGS14O43566 566 aa16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 TULP3O75386 442 aa16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 MYCP01106 439 aaPredicted RBP16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 GLULP15104 373 aa16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 CORO1AP31146 461 aaKnown RBP16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 ILF2Q12905 390 aaKnown RBP16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 DSC3Q14574 896 aa16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 XKR7Q5GH72 579 aa16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 ACDQ96AP0 544 aa16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 CRLS1Q9UJA2 301 aa16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 LRFN2Q9ULH4 789 aa16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 UGT2A1Q9Y4X1 527 aa16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 ELOVL7A1L3X0 281 aa16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 CDK2AP1O14519 115 aa16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 ZNF7P17097 686 aaPredicted RBP16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 MRPS15P82914 257 aaKnown RBP16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 SIM2Q14190 667 aaPredicted RBP16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 KIAA1841Q6NSI8 718 aa16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 CRTC3Q6UUV7 619 aa16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 EID3Q8N140 333 aa16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 SNX19Q92543 992 aa16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 KCNJ9Q92806 393 aa16.18■□□□□ 0.18
CDC42EP4-201ENST00000335793 ITCHQ96J02 903 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms