RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 FAM162AQ96A26 154 aa17.31■□□□□ 0.36
LRCH3-201ENST00000334859 SCRN2Q96FV2 425 aa17.31■□□□□ 0.36
LRCH3-201ENST00000334859 LYSMD1Q96S90 227 aa17.31■□□□□ 0.36
LRCH3-201ENST00000334859 UGT2B28Q9BY64 529 aa17.31■□□□□ 0.36
LRCH3-201ENST00000334859 ACPTQ9BZG2 426 aa17.31■□□□□ 0.36
LRCH3-201ENST00000334859 CARS2Q9HA77 564 aaKnown RBP17.31■□□□□ 0.36
LRCH3-201ENST00000334859 TIMMDC1Q9NPL8 285 aa17.31■□□□□ 0.36
LRCH3-201ENST00000334859 SLC25A37Q9NYZ2 338 aa17.31■□□□□ 0.36
LRCH3-201ENST00000334859 ADGRE2Q9UHX3 823 aa17.31■□□□□ 0.36
LRCH3-201ENST00000334859 INVSQ9Y283 1065 aa17.31■□□□□ 0.36
LRCH3-201ENST00000334859 ZNF510Q9Y2H8 683 aa17.31■□□□□ 0.36
LRCH3-201ENST00000334859 MAGED1Q9Y5V3 778 aaPredicted RBP17.31■□□□□ 0.36
LRCH3-201ENST00000334859 PDE4DIPQ5VU43 2346 aa17.31■□□□□ 0.36
LRCH3-201ENST00000334859 A0A1W2PRU2 124 aa17.31■□□□□ 0.36
LRCH3-201ENST00000334859 PABPN1LA6NDY0 278 aaKnown RBP17.31■□□□□ 0.36
LRCH3-201ENST00000334859 TRIM64CA6NLI5 447 aa17.31■□□□□ 0.36
LRCH3-201ENST00000334859 UGT2B4P06133 528 aa17.31■□□□□ 0.36
LRCH3-201ENST00000334859 CBSLP0DN79 551 aa17.31■□□□□ 0.36
LRCH3-201ENST00000334859 CBSP35520 551 aa17.31■□□□□ 0.36
LRCH3-201ENST00000334859 YAP1P46937 504 aaKnown RBP17.31■□□□□ 0.36
LRCH3-201ENST00000334859 ALDH3A2P51648 485 aa17.31■□□□□ 0.36
LRCH3-201ENST00000334859 TRIM60Q495X7 471 aa17.31■□□□□ 0.36
LRCH3-201ENST00000334859 GCNT7Q6ZNI0 430 aa17.31■□□□□ 0.36
LRCH3-201ENST00000334859 DDX53Q86TM3 631 aaKnown RBP17.31■□□□□ 0.36
LRCH3-201ENST00000334859 ERI1Q8IV48 349 aaKnown RBP17.31■□□□□ 0.36
LRCH3-201ENST00000334859 MSRB3Q8IXL7 192 aa17.31■□□□□ 0.36
LRCH3-201ENST00000334859 ZNF296Q8WUU4 475 aaPredicted RBP17.31■□□□□ 0.36
LRCH3-201ENST00000334859 SDCCAG3Q96C92 435 aa17.31■□□□□ 0.36
LRCH3-201ENST00000334859 SUV39H2Q9H5I1 410 aa17.31■□□□□ 0.36
LRCH3-201ENST00000334859 PDE10AQ9Y233 779 aa17.31■□□□□ 0.36
LRCH3-201ENST00000334859 PCDHGA11Q9Y5H2 935 aa17.31■□□□□ 0.36
LRCH3-201ENST00000334859 TRAV19A0A0A6YYK7 116 aa17.3■□□□□ 0.36
LRCH3-201ENST00000334859 ELOVL7A1L3X0 281 aa17.3■□□□□ 0.36
LRCH3-201ENST00000334859 AGAP14A8MT82 685 aa17.3■□□□□ 0.36
LRCH3-201ENST00000334859 UPK1AO00322 258 aa17.3■□□□□ 0.36
LRCH3-201ENST00000334859 PDYNP01213 254 aa17.3■□□□□ 0.36
LRCH3-201ENST00000334859 LRG1P02750 347 aa17.3■□□□□ 0.36
LRCH3-201ENST00000334859 OR56A5P0C7T3 313 aa17.3■□□□□ 0.36
LRCH3-201ENST00000334859 TCF3P15923 654 aa17.3■□□□□ 0.36
LRCH3-201ENST00000334859 LAG3P18627 525 aa17.3■□□□□ 0.36
LRCH3-201ENST00000334859 ADARB1P78563 741 aaKnown RBP17.3■□□□□ 0.36
LRCH3-201ENST00000334859 DEFB103AP81534 67 aa17.3■□□□□ 0.36
LRCH3-201ENST00000334859 SLC7A9P82251 487 aa17.3■□□□□ 0.36
LRCH3-201ENST00000334859 DAG1Q14118 895 aa17.3■□□□□ 0.36
LRCH3-201ENST00000334859 BOP1Q14137 746 aaKnown RBP17.3■□□□□ 0.36
LRCH3-201ENST00000334859 ZBED5Q49AG3 693 aa17.3■□□□□ 0.36
LRCH3-201ENST00000334859 RNF165Q6ZSG1 346 aa17.3■□□□□ 0.36
LRCH3-201ENST00000334859 SELENOMQ8WWX9 145 aa17.3■□□□□ 0.36
LRCH3-201ENST00000334859 SH3GL1Q99961 368 aa17.3■□□□□ 0.36
LRCH3-201ENST00000334859 SLC32A1Q9H598 525 aa17.3■□□□□ 0.36
LRCH3-201ENST00000334859 ELOVL6Q9H5J4 265 aa17.3■□□□□ 0.36
LRCH3-201ENST00000334859 GORASP2Q9H8Y8 452 aa17.3■□□□□ 0.36
LRCH3-201ENST00000334859 CD84Q9UIB8 345 aa17.3■□□□□ 0.36
LRCH3-201ENST00000334859 NRG2O14511 850 aaPredicted RBP17.3■□□□□ 0.36
LRCH3-201ENST00000334859 EPORP19235 508 aa17.3■□□□□ 0.36
LRCH3-201ENST00000334859 HLA-FP30511 346 aa17.3■□□□□ 0.36
LRCH3-201ENST00000334859 PTSQ03393 145 aa17.3■□□□□ 0.36
LRCH3-201ENST00000334859 USP39Q53GS9 565 aaKnown RBP17.3■□□□□ 0.36
LRCH3-201ENST00000334859 USP51Q70EK9 711 aa17.3■□□□□ 0.36
LRCH3-201ENST00000334859 ANKRD33Q7Z3H0 272 aa17.3■□□□□ 0.36
LRCH3-201ENST00000334859 ZDHHC13Q8IUH4 622 aa17.3■□□□□ 0.36
LRCH3-201ENST00000334859 PHACTR4Q8IZ21 702 aa17.3■□□□□ 0.36
LRCH3-201ENST00000334859 LEMD2Q8NC56 503 aa17.3■□□□□ 0.36
LRCH3-201ENST00000334859 PYCR2Q96C36 320 aa17.3■□□□□ 0.36
LRCH3-201ENST00000334859 ISOC1Q96CN7 298 aa17.3■□□□□ 0.36
LRCH3-201ENST00000334859 SLC47A1Q96FL8 570 aa17.3■□□□□ 0.36
LRCH3-201ENST00000334859 BEGAINQ9BUH8 593 aa17.3■□□□□ 0.36
LRCH3-201ENST00000334859 ASIC5Q9NY37 505 aa17.3■□□□□ 0.36
LRCH3-201ENST00000334859 EBF1Q9UH73 591 aa17.3■□□□□ 0.36
LRCH3-201ENST00000334859 DLGAP4Q9Y2H0 992 aa17.3■□□□□ 0.36
LRCH3-201ENST00000334859 TRIM17Q9Y577 477 aa17.3■□□□□ 0.36
LRCH3-201ENST00000334859 LAMA3Q16787 3333 aa17.29■□□□□ 0.36
LRCH3-201ENST00000334859 TRIM64A6NGJ6 449 aa17.29■□□□□ 0.36
LRCH3-201ENST00000334859 LEFTY2O00292 366 aa17.29■□□□□ 0.36
LRCH3-201ENST00000334859 CXCR6O00574 342 aa17.29■□□□□ 0.36
LRCH3-201ENST00000334859 FKTNO75072 461 aa17.29■□□□□ 0.36
LRCH3-201ENST00000334859 ALPLP05186 524 aa17.29■□□□□ 0.36
LRCH3-201ENST00000334859 THRBP10828 461 aa17.29■□□□□ 0.36
LRCH3-201ENST00000334859 CDK4P11802 303 aa17.29■□□□□ 0.36
LRCH3-201ENST00000334859 NEK2P51955 445 aa17.29■□□□□ 0.36
LRCH3-201ENST00000334859 PTPN5P54829 565 aa17.29■□□□□ 0.36
LRCH3-201ENST00000334859 RPS14P62263 151 aaKnown RBP17.29■□□□□ 0.36
LRCH3-201ENST00000334859 NKG7Q16617 165 aa17.29■□□□□ 0.36
LRCH3-201ENST00000334859 GALNT13Q8IUC8 556 aa17.29■□□□□ 0.36
LRCH3-201ENST00000334859 SLC22A17Q8WUG5 538 aa17.29■□□□□ 0.36
LRCH3-201ENST00000334859 AURKBQ96GD4 344 aaPredicted RBP17.29■□□□□ 0.36
LRCH3-201ENST00000334859 MUS81Q96NY9 551 aa17.29■□□□□ 0.36
LRCH3-201ENST00000334859 TSSK3Q96PN8 268 aa17.29■□□□□ 0.36
LRCH3-201ENST00000334859 PHF12Q96QT6 1004 aa17.29■□□□□ 0.36
LRCH3-201ENST00000334859 NPLQ9BXD5 320 aaPredicted RBP17.29■□□□□ 0.36
LRCH3-201ENST00000334859 ING2Q9H160 280 aa17.29■□□□□ 0.36
LRCH3-201ENST00000334859 POLR1BQ9H9Y6 1135 aa17.29■□□□□ 0.36
LRCH3-201ENST00000334859 GPBP1L1Q9HC44 474 aaPredicted RBP17.29■□□□□ 0.36
LRCH3-201ENST00000334859 SLC6A13Q9NSD5 602 aa17.29■□□□□ 0.36
LRCH3-201ENST00000334859 ATXN10Q9UBB4 475 aa17.29■□□□□ 0.36
LRCH3-201ENST00000334859 MBD1Q9UIS9 605 aaPredicted RBP17.29■□□□□ 0.36
LRCH3-201ENST00000334859 PLXNB3Q9ULL4 1909 aa17.29■□□□□ 0.36
LRCH3-201ENST00000334859 H0YAE9 185 aa17.28■□□□□ 0.36
LRCH3-201ENST00000334859 TGM5O43548 720 aa17.28■□□□□ 0.36
LRCH3-201ENST00000334859 PRSS23O95084 383 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms