RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 FZD3Q9NPG1 666 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 ABCF3Q9NUQ8 709 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 DDX19AQ9NUU7 478 aaKnown RBP3.95□□□□□ -1.78
SMCO3-201ENST00000316048 PRMT7Q9NVM4 692 aaPredicted RBP3.95□□□□□ -1.78
SMCO3-201ENST00000316048 RBM28Q9NW13 759 aaKnown RBP3.95□□□□□ -1.78
SMCO3-201ENST00000316048 MCM9Q9NXL9 1143 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 COX11Q9Y6N1 276 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 CASZ1Q86V15 1759 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 COL4A1P02462 1669 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 BRWD3Q6RI45 1802 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 A0A1B0GUL6 1792 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 STK36Q9NRP7 1315 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 H0YIN7 160 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 J3QR06 171 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 PLK4O00444 970 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 CTAGE5O15320 804 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 RGS14O43566 566 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 CYP1A2P05177 515 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 CCDC192P0DO97 292 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 RPL3P39023 403 aaKnown RBP3.94□□□□□ -1.78
SMCO3-201ENST00000316048 ALDH7A1P49419 539 aaKnown RBP3.94□□□□□ -1.78
SMCO3-201ENST00000316048 MXI1P50539 228 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 RASSF2P50749 326 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 ARSEP51690 589 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 ZP1P60852 638 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 STK38Q15208 465 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 LEXMQ3ZCV2 418 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 C12orf60Q5U649 245 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 LRCH2Q5VUJ6 765 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 CCDC73Q6ZRK6 1079 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 TRAPPC11Q7Z392 1133 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 METTL23Q86XA0 190 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 ZNF444Q8N0Y2 327 aaPredicted RBP3.94□□□□□ -1.78
SMCO3-201ENST00000316048 DEPDC1BQ8WUY9 529 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 OIT3Q8WWZ8 545 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 LPAR1Q92633 364 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 CFAP57Q96MR6 1250 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 ZNF558Q96NG5 402 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 THUMPD3Q9BV44 507 aaKnown RBP3.94□□□□□ -1.78
SMCO3-201ENST00000316048 SEMA4CQ9C0C4 833 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 TNMDQ9H2S6 317 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 EBF3Q9H4W6 596 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 MAGIXQ9H6Y5 334 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 PLAC1Q9HBJ0 212 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 XAB2Q9HCS7 855 aaKnown RBP3.94□□□□□ -1.78
SMCO3-201ENST00000316048 CHMP1AQ9HD42 196 aaPredicted RBP3.94□□□□□ -1.78
SMCO3-201ENST00000316048 COQ3Q9NZJ6 369 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 POLLQ9UGP5 575 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 LIPGQ9Y5X9 500 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 ZFP37Q9Y6Q3 630 aaPredicted RBP3.94□□□□□ -1.78
SMCO3-201ENST00000316048 COL1A1P02452 1464 aaPredicted RBP3.94□□□□□ -1.78
SMCO3-201ENST00000316048 NID2Q14112 1375 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 MROH7-TTC4A0A0A0MT08 1334 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 FAM205AQ6ZU69 1335 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 CCDC88AQ3V6T2 1871 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 TNRC6CQ9HCJ0 1690 aaKnown RBP3.94□□□□□ -1.78
SMCO3-201ENST00000316048 hDV102S1A0JD36 115 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 FAM90A26D6RGX4 464 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 CYR61O00622 381 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 WNT9BO14905 357 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 PRDM1O75626 825 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 YEATS4O95619 227 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 CAVIN2O95810 425 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 MMP10P09238 476 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 OR52Z1P0C646 297 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 VPREB1P12018 145 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 GJA1P17302 382 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 HNRNPH2P55795 449 aaKnown RBP3.94□□□□□ -1.78
SMCO3-201ENST00000316048 CLDN20P56880 219 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 FOXM1Q08050 763 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 MAD2L1Q13257 205 aaPredicted RBP3.94□□□□□ -1.78
SMCO3-201ENST00000316048 NFE2L1Q14494 772 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 KCNT1Q5JUK3 1230 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 TYW3Q6IPR3 259 aaKnown RBP3.94□□□□□ -1.78
SMCO3-201ENST00000316048 WDR73Q6P4I2 378 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 SASS6Q6UVJ0 657 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 CTCFLQ8NI51 663 aaPredicted RBP3.94□□□□□ -1.78
SMCO3-201ENST00000316048 HDAC11Q96DB2 347 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 USP28Q96RU2 1077 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 TRMOQ9BU70 441 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 NUP85Q9BW27 656 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 PANK2Q9BZ23 570 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 KLHL20Q9Y2M5 609 aa3.94□□□□□ -1.78
SMCO3-201ENST00000316048 TCHHQ07283 1943 aa3.93□□□□□ -1.78
SMCO3-201ENST00000316048 MYH13Q9UKX3 1938 aa3.93□□□□□ -1.78
SMCO3-201ENST00000316048 ARHGEF37A1IGU5 675 aa3.93□□□□□ -1.78
SMCO3-201ENST00000316048 ANKRD28O15084 1053 aa3.93□□□□□ -1.78
SMCO3-201ENST00000316048 KINO60870 393 aaKnown RBP3.93□□□□□ -1.78
SMCO3-201ENST00000316048 SLU7O95391 586 aaKnown RBP3.93□□□□□ -1.78
SMCO3-201ENST00000316048 HOXB2P14652 356 aa3.93□□□□□ -1.78
SMCO3-201ENST00000316048 NAGAP17050 411 aa3.93□□□□□ -1.78
SMCO3-201ENST00000316048 ERCC2P18074 760 aa3.93□□□□□ -1.78
SMCO3-201ENST00000316048 ACHEP22303 614 aa3.93□□□□□ -1.78
SMCO3-201ENST00000316048 U2AF2P26368 475 aaKnown RBP eCLIP3.93□□□□□ -1.78
SMCO3-201ENST00000316048 KIF5BP33176 963 aa3.93□□□□□ -1.78
SMCO3-201ENST00000316048 BTDP43251 543 aa3.93□□□□□ -1.78
SMCO3-201ENST00000316048 ENTPD1P49961 510 aa3.93□□□□□ -1.78
SMCO3-201ENST00000316048 TAS2R38P59533 333 aa3.93□□□□□ -1.78
SMCO3-201ENST00000316048 CD81P60033 236 aa3.93□□□□□ -1.78
SMCO3-201ENST00000316048 TGFB2P61812 414 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms