RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Ccr7P47774 378 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 HnrnpkP61979 463 aaKnown RBP6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Eps8Q08509 821 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Msto1Q2YDW2 556 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Fahd2Q3TC72 313 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Ccser2Q3UHI0 833 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 ADGRF3Q58Y75 991 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Rbm12b1Q80YR9 836 aaKnown RBP6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Rtp2Q80ZI2 223 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 DseQ8BLI4 958 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Tmtc3Q8BRH0 920 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 OsgepQ8BWU5 335 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Tbc1d17Q8BYH7 645 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Scara3Q8C850 606 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 ClmpQ8R373 373 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Cops8Q8VBV7 209 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Olfr615Q8VGY4 313 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Elp2Q91WG4 831 aaKnown RBP6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 LsrQ99KG5 594 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Dppa5aQ9CQS7 118 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Nt5c3aQ9D020 331 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Katnal2Q9D3R6 539 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Lrrc34Q9DAM1 415 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Nova1Q9JKN6 507 aaKnown RBP6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Acsl4Q9QUJ7 711 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Tagln3Q9R1Q8 199 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Atp6v1c1Q9Z1G3 382 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Rhox2dW4VSN9 191 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 MgaA2AWL7 3003 aaKnown RBP6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Ccdc194A0A140LIT1 234 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Zscan4eA0A1B0GRE8 505 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Saxo1B1AXP3 476 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Atp6ap1lD3Z5W0 336 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Gm10715J3QP74 227 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Gm10354K7N6A0 256 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Vmn1r86L7N213 316 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Slc27a2O35488 620 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Egr1P08046 533 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Rack1P68040 317 aaKnown RBP6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 GpamQ61586 827 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Kcna5Q61762 602 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Tead4Q62296 427 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Lingo3Q6GQU6 589 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Rps9Q6ZWN5 194 aaKnown RBP6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Fam185aQ7TPD2 378 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Fjx1Q8BQB4 450 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Tigd4Q8BUZ3 513 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Rdh1Q8CGV4 317 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Gramd1cQ8CI52 457 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Slc5a11Q8K0E3 673 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Slc22a6Q8VC69 545 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Olfr868Q8VFI8 309 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Olfr347Q8VGK2 312 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Pcdhb21Q91V48 774 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Slc26a5Q99NH7 744 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Q9D112 206 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 NvlQ9DBY8 855 aaKnown RBP6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Akr1c12Q9JLI0 323 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Nup205A0A0J9YUD5 2061 aaKnown RBP6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 OtofQ9ESF1 1997 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Cep250Q60952 2414 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Tnip3A0A1D5RMN0 279 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Actl10A2AKE7 346 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Ttll9A2APC3 461 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Esp31A8R0W3 114 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Gm3636E9Q5P1 227 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Asna1O54984 348 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 PigrO70570 771 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Mkln1O89050 735 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Ifrd1P19182 449 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Nos2P29477 1144 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Aldh3a1P47739 453 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Cct7P80313 544 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Ffar3Q3UFD7 319 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Gm5460Q3UQ97 254 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Zc3h12aQ5D1E7 596 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 StyxQ60969 223 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Mvb12aQ78HU3 271 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Fzd10Q8BKG4 582 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Ccdc184Q8BMK5 191 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Exd1Q8CDF7 570 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 TmlheQ91ZE0 421 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Ak5Q920P5 562 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Spata1Q9D5R4 444 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Tmem68Q9D850 329 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 SonQ9QX47 2444 aaKnown RBP6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Gm12248A0A1W2P8B8 313 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Rnf39A2RT81 352 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Mybpc1D3YU50 1127 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Il13ra1O09030 424 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Tspan6O70401 245 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Naa20P61600 178 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Kcnk9Q3LS21 402 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Togaram2Q3TYG6 1002 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Ankrd27Q3UMR0 1048 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Sema3gQ4LFA9 780 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Chi3l1Q61362 389 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Aldh3b1Q80VQ0 468 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Dtd2Q8BHA3 168 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 HadhaQ8BMS1 763 aaKnown RBP6.76□□□□□ -1.33
Retrieved 100 of 22,080 RNA–protein pairs in 21.4 ms