RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 SUPT20HL1Q3ZLR7 823 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 MLIPQ5VWP3 458 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 IER5Q5VY09 327 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 KDM4DQ6B0I6 523 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 NAPEPLDQ6IQ20 393 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 TRMT1LQ7Z2T5 733 aaKnown RBP11.79□□□□□ -0.52
CAPN3-221ENST00000638141 RAB44Q7Z6P3 723 aaPredicted RBP11.79□□□□□ -0.52
CAPN3-221ENST00000638141 CDH24Q86UP0 819 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 TSPYL5Q86VY4 417 aaPredicted RBP11.79□□□□□ -0.52
CAPN3-221ENST00000638141 OR8K5Q8NH50 307 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 ASB15Q8WXK1 588 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 TMEM143Q96AN5 459 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 CDCA5Q96FF9 252 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 PIWIL1Q96J94 861 aaKnown RBP11.79□□□□□ -0.52
CAPN3-221ENST00000638141 GPR137Q96N19 417 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 SPATA9Q9BWV2 254 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 HDHD5Q9BXW7 423 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 JPH1Q9HDC5 661 aaPredicted RBP11.79□□□□□ -0.52
CAPN3-221ENST00000638141 ERVK13-1Q9NX77 482 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 PCDHB5Q9Y5E4 795 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 V9GYQ6 96 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 E5RI56 91 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 STX16O14662 325 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 ANKRD28O15084 1053 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 KPNA6O60684 536 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 PDE9AO76083 593 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 WDPCPO95876 746 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 C1RP00736 705 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 LTA4HP09960 611 aaKnown RBP11.79□□□□□ -0.52
CAPN3-221ENST00000638141 CCNYL3P0C7X3 344 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 KCNA5P22460 613 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 HTR7P34969 479 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 SLC12A2P55011 1212 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 ELP6Q0PNE2 266 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 RPS6KA2Q15349 733 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 PKDCCQ504Y2 493 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 PAGE3Q5JUK9 113 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 KANK2Q63ZY3 851 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 CLEC6AQ6EIG7 209 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 MAMSTRQ6ZN01 415 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 ANKS3Q6ZW76 656 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 UBA3Q8TBC4 463 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 CIDECQ96AQ7 238 aaPredicted RBP11.79□□□□□ -0.52
CAPN3-221ENST00000638141 RAD9AQ99638 391 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 BRINP2Q9C0B6 783 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 EXD2Q9NVH0 621 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 ING3Q9NXR8 418 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 FBXO10Q9UK96 956 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 TSPAN16Q9UKR8 245 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 NDRG4Q9ULP0 352 aaKnown RBP11.79□□□□□ -0.52
CAPN3-221ENST00000638141 FZD10Q9ULW2 581 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 DNAJC15Q9Y5T4 150 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 V9GYH0 126 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 PARP14Q460N5 1801 aa11.79□□□□□ -0.52
CAPN3-221ENST00000638141 A0A0B4J293 547 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 E9PQ18 207 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 TFECO14948 347 aaPredicted RBP11.78□□□□□ -0.52
CAPN3-221ENST00000638141 MSCO60682 206 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 B3GALNT1O75752 331 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 F7P08709 466 aaPredicted RBP11.78□□□□□ -0.52
CAPN3-221ENST00000638141 TGFB3P10600 412 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 HOXB3P14651 431 aaPredicted RBP11.78□□□□□ -0.52
CAPN3-221ENST00000638141 DDCP20711 480 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 PTPN3P26045 913 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 TNFSF8P32971 234 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 APLP1P51693 650 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 PER3P56645 1201 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 OLR1P78380 273 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 CAPSQ13938 189 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 IRF3Q14653 427 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 KYAT1Q16773 422 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 TIGD6Q17RP2 521 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 SETMARQ53H47 684 aaPredicted RBP11.78□□□□□ -0.52
CAPN3-221ENST00000638141 ZNF678Q5SXM1 525 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 PM20D1Q6GTS8 502 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 SHQ1Q6PI26 577 aaKnown RBP11.78□□□□□ -0.52
CAPN3-221ENST00000638141 DPP9Q86TI2 863 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 VSIG10LQ86VR7 867 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 RNF130Q86XS8 419 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 MFSD6LQ8IWD5 586 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.78□□□□□ -0.52
CAPN3-221ENST00000638141 FRS2Q8WU20 508 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 MARC2Q969Z3 335 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 RNF31Q96EP0 1072 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 TMEM74Q96NL1 305 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 PITX2Q99697 317 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 SRRQ9GZT4 340 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 PAK6Q9NQU5 681 aaPredicted RBP11.78□□□□□ -0.52
CAPN3-221ENST00000638141 PLCXD1Q9NUJ7 323 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 AIG1Q9NVV5 245 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 SLC23A1Q9UHI7 598 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 SIX4Q9UIU6 781 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 TRIP11Q15643 1979 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 ZNF646O15015 1829 aaPredicted RBP11.78□□□□□ -0.52
CAPN3-221ENST00000638141 MIA3Q5JRA6 1907 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 F5H423 210 aaPredicted RBP11.78□□□□□ -0.52
CAPN3-221ENST00000638141 ACKR2O00590 384 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 MUSKO15146 869 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 AKR7A2O43488 359 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 PPM1BO75688 479 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms