RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 KRTAP10-5P60370 271 aa2.94□□□□□ -1.94
SRP54-214ENST00000630962 CX3CL1P78423 397 aa2.94□□□□□ -1.94
SRP54-214ENST00000630962 TMEM187Q14656 261 aa2.94□□□□□ -1.94
SRP54-214ENST00000630962 ADAMTSL4-AS1Q5T5F5 129 aa2.94□□□□□ -1.94
SRP54-214ENST00000630962 GRTP1Q5TC63 336 aa2.94□□□□□ -1.94
SRP54-214ENST00000630962 C20orf194Q5TEA3 1177 aa2.94□□□□□ -1.94
SRP54-214ENST00000630962 ZNF613Q6PF04 617 aa2.94□□□□□ -1.94
SRP54-214ENST00000630962 SLC16A9Q7RTY1 509 aa2.94□□□□□ -1.94
SRP54-214ENST00000630962 NUDT13Q86X67 352 aa2.94□□□□□ -1.94
SRP54-214ENST00000630962 COMMD2Q86X83 199 aa2.94□□□□□ -1.94
SRP54-214ENST00000630962 KRTAP7-1Q8IUC3 87 aa2.94□□□□□ -1.94
SRP54-214ENST00000630962 ZNF440Q8IYI8 595 aa2.94□□□□□ -1.94
SRP54-214ENST00000630962 RAB42Q8N4Z0 105 aa2.94□□□□□ -1.94
SRP54-214ENST00000630962 OR2T6Q8NHC8 308 aa2.94□□□□□ -1.94
SRP54-214ENST00000630962 EXD1Q8NHP7 514 aa2.94□□□□□ -1.94
SRP54-214ENST00000630962 SKA1Q96BD8 255 aa2.94□□□□□ -1.94
SRP54-214ENST00000630962 ZNF689Q96CS4 500 aaPredicted RBP2.94□□□□□ -1.94
SRP54-214ENST00000630962 FAM120BQ96EK7 910 aaKnown RBP2.94□□□□□ -1.94
SRP54-214ENST00000630962 MOCOSQ96EN8 888 aa2.94□□□□□ -1.94
SRP54-214ENST00000630962 PYGO2Q9BRQ0 406 aa2.94□□□□□ -1.94
SRP54-214ENST00000630962 VN1R1Q9GZP7 353 aa2.94□□□□□ -1.94
SRP54-214ENST00000630962 FGF21Q9NSA1 209 aa2.94□□□□□ -1.94
SRP54-214ENST00000630962 KIAA1210Q9ULL0 1709 aa2.93□□□□□ -1.94
SRP54-214ENST00000630962 LOC101059948A0A1B0GTJ6 334 aa2.93□□□□□ -1.94
SRP54-214ENST00000630962 GAPDHSO14556 408 aaPredicted RBP2.93□□□□□ -1.94
SRP54-214ENST00000630962 ZNF821O75541 412 aaPredicted RBP2.93□□□□□ -1.94
SRP54-214ENST00000630962 CDC123O75794 336 aaPredicted RBP2.93□□□□□ -1.94
SRP54-214ENST00000630962 DFFBO76075 338 aa2.93□□□□□ -1.94
SRP54-214ENST00000630962 TPOP07202 933 aa2.93□□□□□ -1.94
SRP54-214ENST00000630962 MATR3P43243 847 aaKnown RBP eCLIP2.93□□□□□ -1.94
SRP54-214ENST00000630962 RXRGP48443 463 aa2.93□□□□□ -1.94
SRP54-214ENST00000630962 HUNKP57058 714 aa2.93□□□□□ -1.94
SRP54-214ENST00000630962 GSDMDP57764 484 aa2.93□□□□□ -1.94
SRP54-214ENST00000630962 TMF1P82094 1093 aa2.93□□□□□ -1.94
SRP54-214ENST00000630962 EPS8Q12929 822 aa2.93□□□□□ -1.94
SRP54-214ENST00000630962 PRKAA1Q13131 559 aa2.93□□□□□ -1.94
SRP54-214ENST00000630962 FAM180BQ6P0A1 224 aa2.93□□□□□ -1.94
SRP54-214ENST00000630962 LDB1Q86U70 411 aaPredicted RBP2.93□□□□□ -1.94
SRP54-214ENST00000630962 SPEM1Q8N4L4 309 aa2.93□□□□□ -1.94
SRP54-214ENST00000630962 ZNF383Q8NA42 475 aa2.93□□□□□ -1.94
SRP54-214ENST00000630962 HPSE2Q8WWQ2 592 aa2.93□□□□□ -1.94
SRP54-214ENST00000630962 AGAP3Q96P47 875 aa2.93□□□□□ -1.94
SRP54-214ENST00000630962 TRAF4Q9BUZ4 470 aaPredicted RBP2.93□□□□□ -1.94
SRP54-214ENST00000630962 FGFBP2Q9BYJ0 223 aa2.93□□□□□ -1.94
SRP54-214ENST00000630962 MTMR12Q9C0I1 747 aa2.93□□□□□ -1.94
SRP54-214ENST00000630962 FAM49AQ9H0Q0 323 aaPredicted RBP2.93□□□□□ -1.94
SRP54-214ENST00000630962 ARRDC1-AS1Q9H2J1 176 aa2.93□□□□□ -1.94
SRP54-214ENST00000630962 CACNG5Q9UF02 275 aa2.93□□□□□ -1.94
SRP54-214ENST00000630962 A0A087X002 238 aa2.92□□□□□ -1.94
SRP54-214ENST00000630962 KPNA7A9QM74 516 aa2.92□□□□□ -1.94
SRP54-214ENST00000630962 KHDRBS3O75525 346 aaKnown RBP2.92□□□□□ -1.94
SRP54-214ENST00000630962 ALOX12P18054 663 aa2.92□□□□□ -1.94
SRP54-214ENST00000630962 GARSP41250 739 aaKnown RBP2.92□□□□□ -1.94
SRP54-214ENST00000630962 SLC8A3P57103 927 aa2.92□□□□□ -1.94
SRP54-214ENST00000630962 KRTAP10-12P60413 245 aa2.92□□□□□ -1.94
SRP54-214ENST00000630962 CHAF1BQ13112 559 aa2.92□□□□□ -1.94
SRP54-214ENST00000630962 P2RY6Q15077 328 aa2.92□□□□□ -1.94
SRP54-214ENST00000630962 NTRK2Q16620 822 aa2.92□□□□□ -1.94
SRP54-214ENST00000630962 DUSP28Q4G0W2 176 aa2.92□□□□□ -1.94
SRP54-214ENST00000630962 DCAF10Q5QP82 559 aa2.92□□□□□ -1.94
SRP54-214ENST00000630962 BSPRYQ5W0U4 402 aa2.92□□□□□ -1.94
SRP54-214ENST00000630962 PWWP2BQ6NUJ5 590 aa2.92□□□□□ -1.94
SRP54-214ENST00000630962 FIP1L1Q6UN15 594 aaKnown RBP2.92□□□□□ -1.94
SRP54-214ENST00000630962 SCML4Q8N228 414 aa2.92□□□□□ -1.94
SRP54-214ENST00000630962 AFAP1Q8N556 730 aa2.92□□□□□ -1.94
SRP54-214ENST00000630962 TMEM178AQ8NBL3 297 aa2.92□□□□□ -1.94
SRP54-214ENST00000630962 ZNRF4Q8WWF5 429 aa2.92□□□□□ -1.94
SRP54-214ENST00000630962 ATL1Q8WXF7 558 aa2.92□□□□□ -1.94
SRP54-214ENST00000630962 ANKRD9Q96BM1 317 aaPredicted RBP2.92□□□□□ -1.94
SRP54-214ENST00000630962 SRSF8Q9BRL6 282 aaKnown RBP2.92□□□□□ -1.94
SRP54-214ENST00000630962 FUCA2Q9BTY2 467 aa2.92□□□□□ -1.94
SRP54-214ENST00000630962 LAT2Q9GZY6 243 aa2.92□□□□□ -1.94
SRP54-214ENST00000630962 CPVLQ9H3G5 476 aa2.92□□□□□ -1.94
SRP54-214ENST00000630962 PPANQ9NQ55 473 aaKnown RBP2.92□□□□□ -1.94
SRP54-214ENST00000630962 MBNL1Q9NR56 388 aaKnown RBP2.92□□□□□ -1.94
SRP54-214ENST00000630962 PLCXD1Q9NUJ7 323 aa2.92□□□□□ -1.94
SRP54-214ENST00000630962 DPP3Q9NY33 737 aa2.92□□□□□ -1.94
SRP54-214ENST00000630962 PLAGL1Q9UM63 463 aa2.92□□□□□ -1.94
SRP54-214ENST00000630962 NOTCH3Q9UM47 2321 aa2.92□□□□□ -1.94
SRP54-214ENST00000630962 SOS1Q07889 1333 aaPredicted RBP2.92□□□□□ -1.94
SRP54-214ENST00000630962 CACNA1FO60840 1977 aa2.91□□□□□ -1.94
SRP54-214ENST00000630962 ANKRD18BA2A2Z9 1011 aa2.91□□□□□ -1.94
SRP54-214ENST00000630962 HYKKA2RU49 373 aa2.91□□□□□ -1.94
SRP54-214ENST00000630962 A6NCN8 305 aa2.91□□□□□ -1.94
SRP54-214ENST00000630962 ANKRD61A6NGH8 418 aa2.91□□□□□ -1.94
SRP54-214ENST00000630962 CTDSP2O14595 271 aa2.91□□□□□ -1.94
SRP54-214ENST00000630962 NXPH2O95156 264 aa2.91□□□□□ -1.94
SRP54-214ENST00000630962 NGFP01138 241 aa2.91□□□□□ -1.94
SRP54-214ENST00000630962 ACP2P11117 423 aa2.91□□□□□ -1.94
SRP54-214ENST00000630962 CAPN3P20807 821 aa2.91□□□□□ -1.94
SRP54-214ENST00000630962 CA4P22748 312 aa2.91□□□□□ -1.94
SRP54-214ENST00000630962 SLC6A12P48065 614 aa2.91□□□□□ -1.94
SRP54-214ENST00000630962 SUOXP51687 545 aa2.91□□□□□ -1.94
SRP54-214ENST00000630962 MAZP56270 477 aaKnown RBP2.91□□□□□ -1.94
SRP54-214ENST00000630962 SNX16P57768 344 aa2.91□□□□□ -1.94
SRP54-214ENST00000630962 MC1RQ01726 317 aa2.91□□□□□ -1.94
SRP54-214ENST00000630962 PNRC1Q12796 327 aaPredicted RBP2.91□□□□□ -1.94
SRP54-214ENST00000630962 TBC1D1Q86TI0 1168 aaPredicted RBP2.91□□□□□ -1.94
SRP54-214ENST00000630962 TAGAPQ8N103 731 aa2.91□□□□□ -1.94
SRP54-214ENST00000630962 TRIML1Q8N9V2 468 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms