RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 PATE1Q8WXA2 126 aa14.55□□□□□ -0.08
UBXN1-218ENST00000616865 NKD1Q969G9 470 aa14.55□□□□□ -0.08
UBXN1-218ENST00000616865 MRRFQ96E11 262 aaKnown RBP14.55□□□□□ -0.08
UBXN1-218ENST00000616865 SLC12A9Q9BXP2 914 aa14.55□□□□□ -0.08
UBXN1-218ENST00000616865 TXLNGYQ9BZA5 131 aa14.55□□□□□ -0.08
UBXN1-218ENST00000616865 ADNPQ9H2P0 1102 aa14.55□□□□□ -0.08
UBXN1-218ENST00000616865 VPS18Q9P253 973 aa14.55□□□□□ -0.08
UBXN1-218ENST00000616865 ZNHIT2Q9UHR6 403 aa14.55□□□□□ -0.08
UBXN1-218ENST00000616865 SUFUQ9UMX1 484 aa14.55□□□□□ -0.08
UBXN1-218ENST00000616865 ST14Q9Y5Y6 855 aa14.55□□□□□ -0.08
UBXN1-218ENST00000616865 UQCRHLA0A096LP55 91 aa14.54□□□□□ -0.08
UBXN1-218ENST00000616865 EXOC1LA0A1B0GW35 172 aa14.54□□□□□ -0.08
UBXN1-218ENST00000616865 FAM159BA6NKW6 160 aa14.54□□□□□ -0.08
UBXN1-218ENST00000616865 UQCRHP07919 91 aa14.54□□□□□ -0.08
UBXN1-218ENST00000616865 OR56A5P0C7T3 313 aa14.54□□□□□ -0.08
UBXN1-218ENST00000616865 THRAP10827 490 aa14.54□□□□□ -0.08
UBXN1-218ENST00000616865 ATP1B2P14415 290 aaPredicted RBP14.54□□□□□ -0.08
UBXN1-218ENST00000616865 CSF2RBP32927 897 aa14.54□□□□□ -0.08
UBXN1-218ENST00000616865 CA5AP35218 305 aa14.54□□□□□ -0.08
UBXN1-218ENST00000616865 POLD2P49005 469 aa14.54□□□□□ -0.08
UBXN1-218ENST00000616865 EIF3BP55884 814 aaKnown RBP14.54□□□□□ -0.08
UBXN1-218ENST00000616865 MPP1Q00013 466 aa14.54□□□□□ -0.08
UBXN1-218ENST00000616865 TLE1Q04724 770 aa14.54□□□□□ -0.08
UBXN1-218ENST00000616865 BIRC2Q13490 618 aa14.54□□□□□ -0.08
UBXN1-218ENST00000616865 SLC29A2Q14542 456 aa14.54□□□□□ -0.08
UBXN1-218ENST00000616865 TYSND1Q2T9J0 566 aa14.54□□□□□ -0.08
UBXN1-218ENST00000616865 BORAQ6PGQ7 559 aa14.54□□□□□ -0.08
UBXN1-218ENST00000616865 SLC30A9Q6PML9 568 aa14.54□□□□□ -0.08
UBXN1-218ENST00000616865 LRRC6Q86X45 466 aa14.54□□□□□ -0.08
UBXN1-218ENST00000616865 GALNT13Q8IUC8 556 aa14.54□□□□□ -0.08
UBXN1-218ENST00000616865 TRAPPC5Q8IUR0 188 aa14.54□□□□□ -0.08
UBXN1-218ENST00000616865 CNTN4Q8IWV2 1026 aa14.54□□□□□ -0.08
UBXN1-218ENST00000616865 ZNF514Q96K75 400 aaPredicted RBP14.54□□□□□ -0.08
UBXN1-218ENST00000616865 DDA1Q9BW61 102 aa14.54□□□□□ -0.08
UBXN1-218ENST00000616865 TSSK1BQ9BXA7 367 aa14.54□□□□□ -0.08
UBXN1-218ENST00000616865 ACSS3Q9H6R3 686 aa14.54□□□□□ -0.08
UBXN1-218ENST00000616865 RMI1Q9H9A7 625 aa14.54□□□□□ -0.08
UBXN1-218ENST00000616865 ATXN10Q9UBB4 475 aa14.54□□□□□ -0.08
UBXN1-218ENST00000616865 GNPTGQ9UJJ9 305 aa14.54□□□□□ -0.08
UBXN1-218ENST00000616865 CRYL1Q9Y2S2 319 aa14.54□□□□□ -0.08
UBXN1-218ENST00000616865 ZFC3H1O60293 1989 aaKnown RBP14.54□□□□□ -0.08
UBXN1-218ENST00000616865 COL12A1Q99715 3063 aa14.54□□□□□ -0.08
UBXN1-218ENST00000616865 TLN1Q9Y490 2541 aaKnown RBP14.53□□□□□ -0.08
UBXN1-218ENST00000616865 GPR89AB7ZAQ6 455 aa14.53□□□□□ -0.08
UBXN1-218ENST00000616865 POC1B-GALNT4F8VUJ3 575 aa14.53□□□□□ -0.08
UBXN1-218ENST00000616865 QSOX1O00391 747 aa14.53□□□□□ -0.08
UBXN1-218ENST00000616865 PRMT5O14744 637 aaPredicted RBP14.53□□□□□ -0.08
UBXN1-218ENST00000616865 OR1I1O60431 355 aa14.53□□□□□ -0.08
UBXN1-218ENST00000616865 AP2A2O94973 939 aa14.53□□□□□ -0.08
UBXN1-218ENST00000616865 S1PR4O95977 384 aa14.53□□□□□ -0.08
UBXN1-218ENST00000616865 IVLP07476 585 aa14.53□□□□□ -0.08
UBXN1-218ENST00000616865 INHBAP08476 426 aa14.53□□□□□ -0.08
UBXN1-218ENST00000616865 GPR89BP0CG08 455 aa14.53□□□□□ -0.08
UBXN1-218ENST00000616865 LIFP15018 202 aa14.53□□□□□ -0.08
UBXN1-218ENST00000616865 ZNF8P17098 575 aaPredicted RBP14.53□□□□□ -0.08
UBXN1-218ENST00000616865 FMO4P31512 558 aa14.53□□□□□ -0.08
UBXN1-218ENST00000616865 HSD17B3P37058 310 aa14.53□□□□□ -0.08
UBXN1-218ENST00000616865 CD151P48509 253 aa14.53□□□□□ -0.08
UBXN1-218ENST00000616865 CTBSQ01459 385 aa14.53□□□□□ -0.08
UBXN1-218ENST00000616865 SRSF1Q07955 248 aaKnown RBP eCLIP14.53□□□□□ -0.08
UBXN1-218ENST00000616865 IFFO1Q0D2I5 559 aa14.53□□□□□ -0.08
UBXN1-218ENST00000616865 ILF2Q12905 390 aaKnown RBP14.53□□□□□ -0.08
UBXN1-218ENST00000616865 KHDC1Q4VXA5 237 aaKnown RBP14.53□□□□□ -0.08
UBXN1-218ENST00000616865 COLEC12Q5KU26 742 aa14.53□□□□□ -0.08
UBXN1-218ENST00000616865 NKAIN2Q5VXU1 208 aa14.53□□□□□ -0.08
UBXN1-218ENST00000616865 TMEM220Q6QAJ8 160 aa14.53□□□□□ -0.08
UBXN1-218ENST00000616865 CRTC3Q6UUV7 619 aa14.53□□□□□ -0.08
UBXN1-218ENST00000616865 PACS1Q6VY07 963 aa14.53□□□□□ -0.08
UBXN1-218ENST00000616865 TAOK1Q7L7X3 1001 aa14.53□□□□□ -0.08
UBXN1-218ENST00000616865 LRRTM4Q86VH4 590 aa14.53□□□□□ -0.08
UBXN1-218ENST00000616865 IL22RA1Q8N6P7 574 aa14.53□□□□□ -0.08
UBXN1-218ENST00000616865 RASGEF1AQ8N9B8 481 aa14.53□□□□□ -0.08
UBXN1-218ENST00000616865 AGBL5Q8NDL9 886 aa14.53□□□□□ -0.08
UBXN1-218ENST00000616865 OR4D9Q8NGE8 314 aa14.53□□□□□ -0.08
UBXN1-218ENST00000616865 CPNE1Q99829 537 aa14.53□□□□□ -0.08
UBXN1-218ENST00000616865 SLC17A6Q9P2U8 582 aa14.53□□□□□ -0.08
UBXN1-218ENST00000616865 SLC17A4Q9Y2C5 497 aa14.53□□□□□ -0.08
UBXN1-218ENST00000616865 B3GALT1Q9Y5Z6 326 aa14.53□□□□□ -0.08
UBXN1-218ENST00000616865 IGLV3-16A0A075B6K0 115 aa14.52□□□□□ -0.09
UBXN1-218ENST00000616865 IGHV1OR21-1A0A087WYE8 117 aa14.52□□□□□ -0.09
UBXN1-218ENST00000616865 OR2AG2A6NM03 316 aa14.52□□□□□ -0.09
UBXN1-218ENST00000616865 CXorf49A8MYA2 514 aaPredicted RBP14.52□□□□□ -0.09
UBXN1-218ENST00000616865 E5RI56 91 aa14.52□□□□□ -0.09
UBXN1-218ENST00000616865 H3BMM5 538 aa14.52□□□□□ -0.09
UBXN1-218ENST00000616865 KMOO15229 486 aa14.52□□□□□ -0.09
UBXN1-218ENST00000616865 PPM1DO15297 605 aa14.52□□□□□ -0.09
UBXN1-218ENST00000616865 GRID2O43424 1007 aa14.52□□□□□ -0.09
UBXN1-218ENST00000616865 NUAK1O60285 661 aa14.52□□□□□ -0.09
UBXN1-218ENST00000616865 PIAS1O75925 651 aa14.52□□□□□ -0.09
UBXN1-218ENST00000616865 HAUS5O94927 633 aa14.52□□□□□ -0.09
UBXN1-218ENST00000616865 FTH1P02794 183 aa14.52□□□□□ -0.09
UBXN1-218ENST00000616865 ESR1P03372 595 aa14.52□□□□□ -0.09
UBXN1-218ENST00000616865 PBLDP30039 288 aaPredicted RBP14.52□□□□□ -0.09
UBXN1-218ENST00000616865 CSTF2P33240 577 aaKnown RBP eCLIP14.52□□□□□ -0.09
UBXN1-218ENST00000616865 GP5P40197 560 aa14.52□□□□□ -0.09
UBXN1-218ENST00000616865 ACTR1BP42025 376 aa14.52□□□□□ -0.09
UBXN1-218ENST00000616865 MSH2P43246 934 aa14.52□□□□□ -0.09
UBXN1-218ENST00000616865 LEPRP48357 1165 aaKnown RBP14.52□□□□□ -0.09
UBXN1-218ENST00000616865 CSE1LP55060 971 aaKnown RBP14.52□□□□□ -0.09
UBXN1-218ENST00000616865 POLE2P56282 527 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms