RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 MAPK8P45983 427 aa8.66□□□□□ -1.02
VPS11-206ENST00000614944 CCR10P46092 362 aa8.66□□□□□ -1.02
VPS11-206ENST00000614944 PCDH1Q08174 1060 aa8.66□□□□□ -1.02
VPS11-206ENST00000614944 TOR2AQ5JU69 321 aa8.66□□□□□ -1.02
VPS11-206ENST00000614944 MARC1Q5VT66 337 aa8.66□□□□□ -1.02
VPS11-206ENST00000614944 ANKRD26P1Q6NSI1 321 aa8.66□□□□□ -1.02
VPS11-206ENST00000614944 GALNT18Q6P9A2 607 aa8.66□□□□□ -1.02
VPS11-206ENST00000614944 KDELC1Q6UW63 502 aa8.66□□□□□ -1.02
VPS11-206ENST00000614944 SPRED2Q7Z698 418 aa8.66□□□□□ -1.02
VPS11-206ENST00000614944 SLC22A9Q8IVM8 553 aa8.66□□□□□ -1.02
VPS11-206ENST00000614944 OR8H2Q8N162 312 aa8.66□□□□□ -1.02
VPS11-206ENST00000614944 OR6S1Q8NH40 331 aa8.66□□□□□ -1.02
VPS11-206ENST00000614944 SH3RF2Q8TEC5 729 aa8.66□□□□□ -1.02
VPS11-206ENST00000614944 C10orf82Q8WW14 230 aa8.66□□□□□ -1.02
VPS11-206ENST00000614944 ST8SIA2Q92186 375 aa8.66□□□□□ -1.02
VPS11-206ENST00000614944 SMG7Q92540 1137 aaKnown RBP8.66□□□□□ -1.02
VPS11-206ENST00000614944 WBP2Q969T9 261 aa8.66□□□□□ -1.02
VPS11-206ENST00000614944 SIGLEC10Q96LC7 697 aa8.66□□□□□ -1.02
VPS11-206ENST00000614944 DDX28Q9NUL7 540 aaKnown RBP8.66□□□□□ -1.02
VPS11-206ENST00000614944 AP4S1Q9Y587 144 aa8.66□□□□□ -1.02
VPS11-206ENST00000614944 KLF2Q9Y5W3 355 aaPredicted RBP8.66□□□□□ -1.02
VPS11-206ENST00000614944 SNX13Q9Y5W8 968 aa8.66□□□□□ -1.02
VPS11-206ENST00000614944 ACTL7BQ9Y614 415 aa8.66□□□□□ -1.02
VPS11-206ENST00000614944 RFPL2O75678 378 aa8.66□□□□□ -1.02
VPS11-206ENST00000614944 ATE1O95260 518 aa8.66□□□□□ -1.02
VPS11-206ENST00000614944 PRKCHP24723 683 aa8.66□□□□□ -1.02
VPS11-206ENST00000614944 KCNJ5P48544 419 aa8.66□□□□□ -1.02
VPS11-206ENST00000614944 NRIP1P48552 1158 aa8.66□□□□□ -1.02
VPS11-206ENST00000614944 NR1H3Q13133 447 aa8.66□□□□□ -1.02
VPS11-206ENST00000614944 DNASE1L3Q13609 305 aa8.66□□□□□ -1.02
VPS11-206ENST00000614944 ZNF846Q147U1 533 aa8.66□□□□□ -1.02
VPS11-206ENST00000614944 TSC22D1Q15714 1073 aa8.66□□□□□ -1.02
VPS11-206ENST00000614944 CARTPTQ16568 116 aa8.66□□□□□ -1.02
VPS11-206ENST00000614944 FNBP1LQ5T0N5 605 aa8.66□□□□□ -1.02
VPS11-206ENST00000614944 GPR153Q6NV75 609 aa8.66□□□□□ -1.02
VPS11-206ENST00000614944 PID1Q7Z2X4 250 aa8.66□□□□□ -1.02
VPS11-206ENST00000614944 CDH24Q86UP0 819 aa8.66□□□□□ -1.02
VPS11-206ENST00000614944 IPMKQ8NFU5 416 aa8.66□□□□□ -1.02
VPS11-206ENST00000614944 OR52K2Q8NGK3 314 aa8.66□□□□□ -1.02
VPS11-206ENST00000614944 TESCQ96BS2 214 aa8.66□□□□□ -1.02
VPS11-206ENST00000614944 EBNA1BP2Q99848 306 aaKnown RBP8.66□□□□□ -1.02
VPS11-206ENST00000614944 SCUBE2Q9NQ36 999 aa8.66□□□□□ -1.02
VPS11-206ENST00000614944 HCFC1R1Q9NWW0 138 aa8.66□□□□□ -1.02
VPS11-206ENST00000614944 SLC27A6Q9Y2P4 619 aa8.66□□□□□ -1.02
VPS11-206ENST00000614944 AP4B1Q9Y6B7 739 aa8.66□□□□□ -1.02
VPS11-206ENST00000614944 SHROOM3Q8TF72 1996 aa8.66□□□□□ -1.02
VPS11-206ENST00000614944 LOC285095A0A1B0GVY8 99 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 A0A1W2PPW3 197 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 TCRBV7S3A2A0A539 114 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 DFFAO00273 331 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 PSIP1O75475 530 aaKnown RBP8.65□□□□□ -1.02
VPS11-206ENST00000614944 GLP2RO95838 553 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 HMBSP08397 361 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 ARNTP27540 789 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 PSMB4P28070 264 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 CASP2P42575 452 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 SERPINH1P50454 418 aaKnown RBP8.65□□□□□ -1.02
VPS11-206ENST00000614944 AP1S2P56377 157 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 ABRQ12979 859 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 PDGFRLQ15198 375 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 ZBED5Q49AG3 693 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 TP53INP2Q8IXH6 220 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 GALNT12Q8IXK2 581 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 C4orf33Q8N1A6 199 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 TDRD5Q8NAT2 981 aaKnown RBP8.65□□□□□ -1.02
VPS11-206ENST00000614944 WFIKKN2Q8TEU8 576 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 ASZ1Q8WWH4 475 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 LRGUKQ96M69 825 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 ZNF347Q96SE7 839 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 IL22Q9GZX6 179 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 OSGEPL1Q9H4B0 414 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 ADPRHL2Q9NX46 363 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 TSR3Q9UJK0 312 aaKnown RBP8.65□□□□□ -1.02
VPS11-206ENST00000614944 ZNF229Q9UJW7 825 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 ZNF221Q9UK13 617 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 ADAMTS6Q9UKP5 1117 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 BAG5Q9UL15 447 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 PCDHGB4Q9UN71 923 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 PCDHGB5Q9Y5G0 923 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 A0A1W2PRG6 482 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 SDR42E2A6NKP2 422 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 NRG2O14511 850 aaPredicted RBP8.65□□□□□ -1.02
VPS11-206ENST00000614944 PAPSS2O95340 614 aaPredicted RBP8.65□□□□□ -1.02
VPS11-206ENST00000614944 CRTAMO95727 393 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 GUCA1CO95843 209 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 HLA-DQB2P05538 268 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 CEBPBP17676 345 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 PGAM1P18669 254 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 FSHRP23945 695 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 CD86P42081 329 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 TRIM25Q14258 630 aaKnown RBP8.65□□□□□ -1.02
VPS11-206ENST00000614944 ERV3-1Q14264 604 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 ZMYND11Q15326 602 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 WSCD2Q2TBF2 565 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 SPANXN3Q5MJ09 141 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 PLEKHG7Q6ZR37 379 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 CPNE9Q8IYJ1 553 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 ARRDC2Q8TBH0 407 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 ARNTL2Q8WYA1 636 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 RAD51AP1Q96B01 352 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms