RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 MRPS17Q9Y2R5 130 aaKnown RBP7.14□□□□□ -1.27
CSDE1-218ENST00000610726 SPO11Q9Y5K1 396 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 WASF2Q9Y6W5 498 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 DYTNA2CJ06 578 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 SLC28A2O43868 658 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 STATHP02808 62 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 RB1P06400 928 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 S100A5P33763 92 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 CDKN2DP55273 166 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 ADAM17P78536 824 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 MGAT3Q09327 533 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 DGCR6Q14129 220 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 SLBPQ14493 270 aaKnown RBP eCLIP7.14□□□□□ -1.27
CSDE1-218ENST00000610726 LRRC26Q2I0M4 334 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 ZNF805Q5CZA5 627 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 ZNF776Q68DI1 518 aaPredicted RBP7.14□□□□□ -1.27
CSDE1-218ENST00000610726 SUSD1Q6UWL2 747 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 CEP68Q76N32 757 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 LRRTM4Q86VH4 590 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 TMCO5AQ8N6Q1 288 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 SLC13A3Q8WWT9 602 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 GLMNQ92990 594 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 HIC2Q96JB3 615 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 SLC22A12Q96S37 553 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 APOL4Q9BPW4 351 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 RTP3Q9BQQ7 232 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 DCUN1D5Q9BTE7 237 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 EPB41L4BQ9H329 900 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 SRMSQ9H3Y6 488 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 ARHGEF3Q9NR81 526 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 MARCH5Q9NX47 278 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 MAGEL2Q9UJ55 1249 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 AP4B1Q9Y6B7 739 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 COL5A3P25940 1745 aaPredicted RBP7.14□□□□□ -1.27
CSDE1-218ENST00000610726 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-218ENST00000610726 A0A1W2PP55 124 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 ELOVL7A1L3X0 281 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 SNTNA6NMZ2 147 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 MATN2O00339 956 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 RGS5O15539 181 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 LDB2O43679 373 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 KAT7O95251 611 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 UMPSP11172 480 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 PRPS2P11908 318 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 HMGCLP35914 325 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 CDKN1CP49918 316 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-218ENST00000610726 AP1S2P56377 157 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 TRIM25Q14258 630 aaKnown RBP7.13□□□□□ -1.27
CSDE1-218ENST00000610726 FAM26DQ5JW98 314 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 DEPDC1Q5TB30 811 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 KLHL35Q6PF15 583 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 BPIFB6Q8NFQ5 453 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 TSTD1Q8NFU3 115 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 OR2T34Q8NGX1 318 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 OR2T3Q8NH03 318 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 DGCR6LQ9BY27 220 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 SFXN1Q9H9B4 322 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 DDX18Q9NVP1 670 aaKnown RBP7.13□□□□□ -1.27
CSDE1-218ENST00000610726 USE1Q9NZ43 259 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 C3orf18Q9UK00 162 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 HIDE1A8MVS5 230 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 ALAS2P22557 587 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 CMPK1P30085 196 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 AKT2P31751 481 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 NUP107P57740 925 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 FOLH1Q04609 750 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 HSPB3Q12988 150 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 DYNC1I2Q13409 638 aaKnown RBP7.13□□□□□ -1.27
CSDE1-218ENST00000610726 PDK3Q15120 406 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 ATP13A5Q4VNC0 1218 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 STEAP4Q687X5 459 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 TYW3Q6IPR3 259 aaKnown RBP7.13□□□□□ -1.27
CSDE1-218ENST00000610726 AGTRAPQ6RW13 159 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 DEF8Q6ZN54 512 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 MRPL43Q8N983 215 aaKnown RBP7.13□□□□□ -1.27
CSDE1-218ENST00000610726 SLC43A3Q8NBI5 491 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 TMEM145Q8NBT3 493 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 PHC3Q8NDX5 983 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 FIBINQ8TAL6 211 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 BTN2A2Q8WVV5 523 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 VMP1Q96GC9 406 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 MIPEPQ99797 713 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 BTBD1Q9H0C5 482 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 KRCC1Q9NPI7 259 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-218ENST00000610726 RUVBL1Q9Y265 456 aaKnown RBP7.13□□□□□ -1.27
CSDE1-218ENST00000610726 DHRS7Q9Y394 339 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 COL4A5P29400 1685 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-218ENST00000610726 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-218ENST00000610726 PLK4O00444 970 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 TSPAN6O43657 245 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 SRCP12931 536 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 CYP4B1P13584 511 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 KCNA5P22460 613 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 SLC26A3P40879 764 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 RIPK1Q13546 671 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 ZNHIT3Q15649 155 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-218ENST00000610726 ADRM1Q16186 407 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 ZNF678Q5SXM1 525 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 TTC23Q5W5X9 447 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms