RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 HSD17B1P14061 328 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 ADRA1AP35348 466 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 NFKB2Q00653 900 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 TRIM32Q13049 653 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 CHIT1Q13231 466 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 NAE1Q13564 534 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 SEMA3AQ14563 771 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 NPTX1Q15818 432 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 CHRNA6Q15825 494 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 ATP6AP1Q15904 470 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 HIST2H2ACQ16777 129 aaPredicted RBP6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 RFX4Q33E94 735 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 SPANXN2Q5MJ10 180 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 HIST2H2AA3Q6FI13 130 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 OR4F3Q6IEY1 312 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 LCN8Q6JVE9 175 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 PDE12Q6L8Q7 609 aaKnown RBP6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 LETMD1Q6P1Q0 360 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 ZNF773Q6PK81 442 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 RNF19BQ6ZMZ0 732 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 CENPSQ8N2Z9 138 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 DTWD1Q8N5C7 304 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 TTC29Q8NA56 475 aaPredicted RBP6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 RHEBL1Q8TAI7 183 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 TMEM125Q96AQ2 219 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 L3HYPDHQ96EM0 354 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 C1orf74Q96LT6 269 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 SLC30A3Q99726 388 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 MYOCQ99972 504 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 TPK1Q9H3S4 243 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 AASSQ9UDR5 926 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 CNOT11Q9UKZ1 510 aaKnown RBP6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 TMCC3Q9ULS5 477 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 CROCCQ5TZA2 2017 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 PNMA8CA0A1B0GUJ8 204 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 LOC100130705A0A1B0GUX0 176 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 RBM47A0AV96 593 aaKnown RBP6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 KPNA3O00505 521 aaPredicted RBP6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 PER2O15055 1255 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 SUV39H1O43463 412 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 CREG1O75629 220 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 EPOP01588 193 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 TRBC1P01850 177 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 SOX6P35712 828 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 HNF4AP41235 474 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 NUDT6P53370 316 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 SPIBQ01892 262 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 FOXM1Q08050 763 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 SREBF2Q12772 1141 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 DNASE1L3Q13609 305 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 MED22Q15528 200 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 ANKDD1AQ495B1 522 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 LDLRAD1Q5T700 205 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 HMBOX1Q6NT76 420 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 FAM171BQ6P995 826 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 KLHL23Q8NBE8 558 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 CAPSLQ8WWF8 208 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 STON2Q8WXE9 905 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 UBXN10Q96LJ8 280 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 TEX37Q96LM6 180 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 ARMC1Q9NVT9 282 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 NLE1Q9NVX2 485 aaPredicted RBP6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 TRPC4Q9UBN4 977 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 RAB23Q9ULC3 237 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 SAMD4AQ9UPU9 718 aaKnown RBP6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 PCDHB3Q9Y5E6 796 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 COL11A2P13942 1736 aaPredicted RBP6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 GON4LQ3T8J9 2241 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 ZNF99A8MXY4 864 aaPredicted RBP6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 HHLA1C9JL84 531 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 H3BMQ9 156 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 IFRD1O00458 451 aaPredicted RBP6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 KPNA5O15131 536 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 MUSKO15146 869 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 TRIM24O15164 1050 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 KRT75O95678 551 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 OPN1SWP03999 348 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 IL6P05231 212 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 CHRM5P08912 532 aaPredicted RBP6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 ZNF12P17014 697 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 MYF6P23409 242 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 GPC1P35052 558 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 CSKP41240 450 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 RGRP47804 291 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 ST8SIA6P61647 398 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 VBP1P61758 197 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 FAM189BP81408 668 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 EMX2Q04743 252 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 ARMC4Q5T2S8 1044 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 KANK2Q63ZY3 851 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 CES5AQ6NT32 575 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 HACD2Q6Y1H2 254 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 CARM1Q86X55 608 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 TRAPPC5Q8IUR0 188 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 AMER2Q8N7J2 671 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 HJURPQ8NCD3 748 aaPredicted RBP6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 KLHDC9Q8NEP7 349 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 FBXO22Q8NEZ5 403 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 ARRDC2Q8TBH0 407 aa6.73□□□□□ -1.33
SYNPO2-206ENST00000610556 COG8Q96MW5 612 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms