RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 GIMD1P0DJR0 217 aa8.57□□□□□ -1.04
CSMD1-216ENST00000602557 CHRM1P11229 460 aaPredicted RBP8.57□□□□□ -1.04
CSMD1-216ENST00000602557 ATP6V0D1P61421 351 aa8.57□□□□□ -1.04
CSMD1-216ENST00000602557 ZNF548Q8NEK5 533 aaPredicted RBP8.57□□□□□ -1.04
CSMD1-216ENST00000602557 FAIMQ9NVQ4 179 aa8.57□□□□□ -1.04
CSMD1-216ENST00000602557 PCDHB9Q9Y5E1 797 aa8.57□□□□□ -1.04
CSMD1-216ENST00000602557 NRCAMQ92823 1304 aa8.57□□□□□ -1.04
CSMD1-216ENST00000602557 RAB19A4D1S5 217 aa8.57□□□□□ -1.04
CSMD1-216ENST00000602557 IQCF5A8MTL0 148 aa8.57□□□□□ -1.04
CSMD1-216ENST00000602557 SGCEO43556 437 aa8.57□□□□□ -1.04
CSMD1-216ENST00000602557 TGDSO95455 350 aa8.57□□□□□ -1.04
CSMD1-216ENST00000602557 GFOD2Q3B7J2 385 aa8.57□□□□□ -1.04
CSMD1-216ENST00000602557 RBFAQ8N0V3 343 aa8.57□□□□□ -1.04
CSMD1-216ENST00000602557 CNTD1Q8N815 330 aa8.57□□□□□ -1.04
CSMD1-216ENST00000602557 SHC3Q92529 594 aa8.57□□□□□ -1.04
CSMD1-216ENST00000602557 MAELQ96JY0 434 aaKnown RBP8.57□□□□□ -1.04
CSMD1-216ENST00000602557 C12orf66Q96MD2 445 aa8.57□□□□□ -1.04
CSMD1-216ENST00000602557 RHOJQ9H4E5 214 aa8.57□□□□□ -1.04
CSMD1-216ENST00000602557 TRPV4Q9HBA0 871 aa8.57□□□□□ -1.04
CSMD1-216ENST00000602557 SEC14L4Q9UDX3 406 aa8.57□□□□□ -1.04
CSMD1-216ENST00000602557 RAB23Q9ULC3 237 aa8.57□□□□□ -1.04
CSMD1-216ENST00000602557 SCN2BO60939 215 aa8.57□□□□□ -1.04
CSMD1-216ENST00000602557 MLLT6P55198 1093 aaPredicted RBP8.57□□□□□ -1.04
CSMD1-216ENST00000602557 WNT3AP56704 352 aa8.57□□□□□ -1.04
CSMD1-216ENST00000602557 RNF151Q2KHN1 245 aa8.57□□□□□ -1.04
CSMD1-216ENST00000602557 PHTF2Q8N3S3 785 aa8.57□□□□□ -1.04
CSMD1-216ENST00000602557 SLC15A4Q8N697 577 aa8.57□□□□□ -1.04
CSMD1-216ENST00000602557 SOCS4Q8WXH5 440 aa8.57□□□□□ -1.04
CSMD1-216ENST00000602557 AARSD1Q9BTE6 412 aaKnown RBP8.57□□□□□ -1.04
CSMD1-216ENST00000602557 COL5A2P05997 1499 aaPredicted RBP8.57□□□□□ -1.04
CSMD1-216ENST00000602557 TNFRSF11BO00300 401 aa8.57□□□□□ -1.04
CSMD1-216ENST00000602557 ZNF35P13682 527 aa8.57□□□□□ -1.04
CSMD1-216ENST00000602557 TSHRP16473 764 aa8.57□□□□□ -1.04
CSMD1-216ENST00000602557 VGLL4Q14135 290 aa8.57□□□□□ -1.04
CSMD1-216ENST00000602557 ZNF782Q6ZMW2 699 aaPredicted RBP8.57□□□□□ -1.04
CSMD1-216ENST00000602557 DNAJC19Q96DA6 116 aa8.57□□□□□ -1.04
CSMD1-216ENST00000602557 TMEM5Q9Y2B1 443 aa8.57□□□□□ -1.04
CSMD1-216ENST00000602557 SPIN1Q9Y657 262 aaPredicted RBP8.57□□□□□ -1.04
CSMD1-216ENST00000602557 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.57□□□□□ -1.04
CSMD1-216ENST00000602557 COL3A1P02461 1466 aaPredicted RBP8.57□□□□□ -1.04
CSMD1-216ENST00000602557 SALL3Q9BXA9 1300 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 RFPL2O75678 378 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 PSMD10O75832 226 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 UROSP10746 265 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 MSR1P21757 451 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 ERVK-25P63136 954 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 RBM48Q5RL73 367 aaKnown RBP8.56□□□□□ -1.04
CSMD1-216ENST00000602557 TMEM198Q66K66 360 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 DCBLD1Q8N8Z6 715 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 DUSP16Q9BY84 665 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 MUC13Q9H3R2 512 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 FBXO5Q9UKT4 447 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 MAP4K5Q9Y4K4 846 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 ATRXP46100 2492 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 MEIS2O14770 477 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 PER2O15055 1255 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 LIMK2P53671 638 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 GTF2BQ00403 316 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 ADGRD2Q7Z7M1 963 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 ANKRD13BQ86YJ7 626 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 SVOPLQ8N434 492 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 OR5B17Q8NGF7 314 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 ZNF486Q96H40 463 aaPredicted RBP8.56□□□□□ -1.04
CSMD1-216ENST00000602557 MYO19Q96H55 970 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 CD320Q9NPF0 282 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 RNF6Q9Y252 685 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 ADAM15Q13444 863 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 TAPT1Q6NXT6 567 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 APOLD1Q96LR9 279 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 IFNGP01579 166 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 CPN2P22792 545 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 ANXA8L1Q5VT79 327 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 OTOP3Q7RTS5 596 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 JAZF1Q86VZ6 243 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 ANKRD46Q86W74 232 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 RGL4Q8IZJ4 473 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 TMIEQ8NEW7 156 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 MGME1Q9BQP7 344 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 TMED9Q9BVK6 235 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 CD93Q9NPY3 652 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 MTMR10Q9NXD2 777 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 ZNF490Q9ULM2 529 aaPredicted RBP8.56□□□□□ -1.04
CSMD1-216ENST00000602557 SHPRHQ149N8 1683 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 EFNA1P20827 205 aaPredicted RBP8.56□□□□□ -1.04
CSMD1-216ENST00000602557 TIGD3Q6B0B8 471 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 FAM124AQ86V42 546 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 PARGQ86W56 976 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 KIF18BQ86Y91 864 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.56□□□□□ -1.04
CSMD1-216ENST00000602557 SMG8Q8ND04 991 aaKnown RBP8.56□□□□□ -1.04
CSMD1-216ENST00000602557 RIC1Q4ADV7 1423 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 NEDD8-MDP1E9PL57 170 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 ERVK-8P63133 956 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 CBX2Q14781 532 aaPredicted RBP8.56□□□□□ -1.04
CSMD1-216ENST00000602557 GPR180Q86V85 440 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 DTX3Q8N9I9 347 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 FCGR1BQ92637 280 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 DPAGT1Q9H3H5 408 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 RGCCQ9H4X1 137 aa8.56□□□□□ -1.04
CSMD1-216ENST00000602557 PRMT8Q9NR22 394 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms